Chiloscyllium plagiosum (whitespotted bambooshark): 122564213
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Entry
122564213 CDS
T08871
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122564213 (ddx52)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122564213 (ddx52)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
Helicases
122564213 (ddx52)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
SNF2-rel_dom
eIF3g
Motif
Other DBs
NCBI-GeneID:
122564213
NCBI-ProteinID:
XP_043574843
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All DBs
Position
28:14558232..14591428
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AA seq
584 aa
AA seq
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MMVSIADESLCGLMYRCSMLGACLSMAMEALDLFRALGSGARFDWKRFGKDAERLRVMNS
SSTILSENVPDLDFFNSQRAKNCKSVVSVLKSNGEEKESTADCKGDMCVSLGKRKLDMGS
SEKKKRNKVTNAMSDIFSNTKDDGGDDDDGIMLMSSLGRKTKSSIDRTDTERSAEKLEHQ
RREKINQLRRKHRIHVDGTDIPEPVATFEQLLQEYNVHTKIIQNIQEAGFQSPTPIQMQA
IPVMLHNREILACAPTGSGKTLAFCIPLLTCLKQPMNKGFRALILSPTRELASQTHRELV
KLSEGIGFRIHMINKAAEAAKKFGPKTSNKFDVLVTTPNRLIYLLNQDPPALDLSRVEWL
IVDESDKLFEDGKSGFRDQLATIFLACTSHSVRRAMFSATFAFDVEQWCKLNLDNVISVS
IGTRNSAVETVEQELLFVGTETGKLVAMRDLVKKGFSPPVLVFVQSIERVCLLYVGRTGR
AGHRGKSITFFTEDDKPLLRSIANVIKQAGCPVPDYMMQINKLQSKQKKRLIKNPIKRAD
IKTTPKYFIEKASRTKKMIQKSKKKEKSHASVPAAKAEQVTTES
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgtcgatcgccgatgagtcgctctgtgggttgatgtatcggtgctccatgttg
ggggcctgtctgtccatggcgatggaggctctcgatctgttccgggcgctgggctcgggg
gcccgctttgattggaaacgcttcgggaaggacgctgagaggctgcgggtaatgaattca
agcagcaccatcttgagtgaaaatgttcctgaccttgacttttttaacagtcagcgtgct
aaaaactgcaaatcagtggtcagtgtgttgaaaagcaatggggaggaaaaagagtctaca
gcagactgcaagggcgacatgtgtgtatccctaggaaaaagaaaattagacatgggtagt
tcagaaaagaagaaaaggaacaaagtgaccaatgcaatgtctgacattttttccaatacc
aaagatgatggtggtgatgatgatgatggaataatgttgatgtcctcactgggaaggaag
accaagagtagtattgacaggacagacaccgaacgcagtgctgagaaactggaacatcaa
cgacgagaaaagataaatcaactccggcgtaagcatcggattcatgtggatggaacagat
attcctgaaccagttgcaacctttgaacagctcttacaggagtataacgtgcacacaaaa
attattcagaacatacaggaagctggtttccaatcacccacccccatacagatgcaagcc
attcctgtaatgctacataatcgtgaaatcctggcctgtgccccaactggatcgggaaag
accttggccttttgcattccacttttgacttgtctaaaacaaccaatgaacaagggtttc
agggccctgatactgtctcctactcgcgagcttgccagccagactcatcgggagctagta
aagctctccgaaggtataggattcagaattcacatgatcaacaaagcagctgaggctgcc
aaaaagtttggtcccaagacgtcaaataaatttgatgttttggtgactactccaaacaga
ctgatttatttgttaaatcaggatcctcccgctctggacctcagcagggtggagtggctg
attgttgatgaatctgataagttgtttgaagatggcaaatctggattccgagatcagctc
gccactatcttcttggcatgtacatctcacagtgtccggcgagccatgtttagtgccacc
tttgcatttgatgttgagcagtggtgcaaactgaacttggacaacgtgatatctgtgtcg
attggtacaaggaattctgccgtggagacagtggaacaagagttactttttgtgggtact
gaaactggaaaactagtagcgatgagagatctggttaaaaagggattttcacctccagtg
ctagttttcgttcagtctattgaaagagtgtgcttgttatatgtaggacggactggaaga
gctggtcatcgaggaaagtctattacatttttcacagaagatgataagccacttttacgg
agtatagcaaacgttatcaaacaagctggctgccctgtaccagactatatgatgcaaata
aacaaactgcaaagtaaacaaaagaaaaggttgatcaaaaatccaatcaaacgagcagat
atcaagaccacaccaaagtacttcattgaaaaggcttccaggacgaaaaaaatgatacag
aagagcaagaaaaaagaaaaatcccatgcaagtgtgccagctgccaaggctgaacaggtt
accactgaaagctaa
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