Chiloscyllium plagiosum (whitespotted bambooshark): 122564224
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Entry
122564224 CDS
T08871
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122564224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122564224
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122564224
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122564224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Zn_ribbon_IFT122_C
Sipho_Gp37
Motif
Other DBs
NCBI-GeneID:
122564224
NCBI-ProteinID:
XP_043574856
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All DBs
Position
28:33376386..33601794
Genome browser
AA seq
1072 aa
AA seq
DB search
MFSTFDTLQILKQPAIQALSASCQVTVTPQNSRSISQTGSRPPAVSHTLFPPPGCQSDIV
PAPGPSVRLGPAPAPSVSNCPRPRAVSQTGSRPCAVIQTLSPPPGCQSDWVPPPSCQSDT
VPAPGLSVRHCPRPRAVSQTLSPPPGCLSDWVPPPGSQSDTVPAPGLSVRHCPRPSARSG
GEGELCVSRCTVIVGGGFVADAARVEGLRSPAGRSGSAARGGDRAARFFKTMGGNPEKAK
RRISEYQLPSSVNILTTTTTRTRTTNIYTNLEKLQLLKQSVYDLDLKTQHQFHPLWLCNT
SEDEQQDYGFVSMVKLERPDRDPHPCLSLFNKAKFAIQRGATAVIFDVTDDASAAGQLKQ
NQEDLLPCPVILIQGHDATQLMKVINTNGEAIVRIHVKSDRLGRPAYDVGILMTLIVAFS
VVVMILAVRIKCKQNRTRNSLQQQTINAISQLATRRYQSRCQAQGHEHQNSLDSQSSNVS
EPVCAICLEEFADGQDLRIISCFHEFHKECIDPWLLQHRTCPLCMYNIIEGSSSIPQLEP
QDQANPAAQLNQRIHLLRRYPGHAHLHRPDTAIPSRPSRLNNPRTPGMQIAPPGHYFVAP
EVYRAGFNTMRYVATRPQQSSNLHRCNYRHVDGQGVFYRHHRPFTVRKGPPWPDQVLHHP
CLHKPPCWPQHLSACNAPLSSHHLTPNCAPDHSQITSNHDNHSYSGDSFGINCSVRSGYL
ADSPGSDSSSGPCHCSSSDSTLDCTDISNHCTYGSQSTFRSSLSSEYDPLVYCGAGGETM
KSSTFEVQRPRSMDSVNGPLEDNVFSHTHYHHHRHHHYGDADPSPEGVQCMNPSWSSAEK
QDSTQLEEFMNDKRHCQPEAEFSCQSQCAAHPVQCPCLDQHLLLPTGLCLPETSLKTMDV
ERRKSEAVCAKPDQVPSENKSSRTSNRRRRRRRKRSFQMDQPMVYFHQDYSTLEDCRVHI
HYGNRGRQCHLPNVQPSVPIPLILNNGASNEWSFPFCECPSSLCQQRLCQVGSEPQLAEE
QHMNNNEPRHTFQESCTEVYCDGVQDESFHCQTIPNNPGSESNVGEIGEEAV
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcacttttgacactcttcaaatcctgaaacagcctgctatccaggctttgtct
gctagctgccaagtaactgttacaccacaaaattccaggtctatcagtcagactgggtcc
cgccccccggctgtcagtcacacactgttcccgccccctggctgtcagtcagacattgtc
cccgcccccgggccgtcagttagactgggtcccgcccctgcgccgtcagtcagcaactgt
ccccgcccacgggctgtcagtcagactgggtcccgcccctgcgccgtcattcagacactg
tccccgcccccgggctgtcagtcagactgggtcccgcccccgagctgtcagtcagacact
gtccccgctcccggactgtcagtcagacactgtccccgcccccgggctgtcagtcagaca
ctgtccccgcccccgggctgtctgtcagactgggtcccgcccccgggcagtcagtcagac
actgtccccgcccccgggctgtcagtcagacactgtccccgcccctctgctcgctctggt
ggagagggagagttgtgtgtgtctcggtgcacggttattgttggaggcgggtttgtggcc
gacgccgctcgggtcgagggtttgcggtcgccggctgggcgcagcggcagtgcggcccgg
ggcggtgaccgtgcggccagatttttcaagaccatgggaggaaatccagaaaaagctaaa
agacggatttctgaataccaacttcccagctcggtgaacatactcacaactactacgact
cgtacccgaactacaaatatctacacaaatcttgagaaactacagctacttaagcagagc
gtgtatgacctggatttgaaaacgcagcatcagtttcaccctctgtggctgtgtaacacc
agtgaagacgagcagcaagactatggctttgtcagtatggtcaaattggagcgtccagac
cgagacccacatccctgtctctccctcttcaacaaggctaagtttgctattcagagaggt
gccacagcagtgatttttgatgtaacagatgatgcaagtgctgcgggtcagctgaaacag
aatcaagaggatcttttgccttgtccagttatcctgatccaaggtcatgatgctacccaa
ctgatgaaggtcattaacaccaatggtgaagcaatagtcaggattcatgtcaagagtgac
agattgggtcggccagcctacgatgtggggatcctcatgactctgattgtggctttctca
gttgttgtcatgatcctggcggtgagaatcaaatgcaagcagaaccggactcggaattcc
ttgcagcagcagactatcaatgcgatcagccagctcgccacacgccgttatcaatcaagg
tgtcaggctcagggtcacgagcatcagaacagcttggattcacagagtagcaatgtgtca
gagccagtgtgtgctatctgtctggaggagtttgctgatgggcaggatctacggataatt
tcttgtttccatgaattccacaaggaatgtatagatccctggcttcttcagcatcgtacc
tgccctctctgcatgtacaatatcattgagggtagttcttcaattccgcaactggaacct
caagaccaagccaatccagctgctcaactaaaccagcgtatccatttgctcaggcgttac
cctggtcatgcgcatcttcacaggccagacactgccattccttccaggccttctcgcttg
aacaatcccagaactccaggaatgcaaattgcaccccctggccattactttgttgctcca
gaagtctatcgtgcagggttcaacaccatgagatatgtggccacaaggccccaacaatct
tcaaacttgcataggtgtaactaccgtcatgttgatggccaaggagttttctacagacac
cacagaccctttactgtccgaaaaggcccaccatggccagaccaagttcttcatcaccca
tgtctgcataaacctccctgctggccgcagcacctttcagcatgcaatgccccactatcc
tcacatcacttaacgcctaactgtgctcctgatcattcacagatcaccagcaaccatgac
aaccacagctactcaggggacagttttggtattaactgttcagtgagaagtggatacctg
gctgacagcccaggtagtgattccagctcaggtccttgccactgctcctccagtgattca
acactggactgtacagacatcagtaaccattgtacctatgggagccagtcaaccttccgt
agctctctgagcagtgagtatgatcctcttgtgtactgtggggcgggtggggaaactatg
aagagttcaacctttgaagtacagagacccaggtcaatggactcagttaatggtcctctg
gaagacaatgtgtttagccacactcactaccaccatcatcggcaccatcactatggcgac
gctgacccaagtcctgaaggagtgcaatgtatgaaccccagctggagctcagcagagaag
caggatagcacacagttggaggagttcatgaatgataaacgacactgccagcctgaggca
gagttcagctgtcaatcccagtgcgctgcccatcctgtccagtgcccctgcttggaccag
cacctgttactccccactggactctgccttcctgaaacatccttgaaaactatggatgtg
gaaaggagaaagagtgaggcagtttgtgccaaaccagatcaagtgccttcagaaaataaa
tccagtcggaccagtaacaggaggaggcgaaggaggaggaaaagaagtttccagatggat
caaccaatggtttacttccatcaggactacagtactctggaggactgtcgagtacatatt
cattatgggaaccgtgggcggcagtgccatcttccaaatgttcagccgtcagtgccaatc
cctttaatcctaaacaatggagcctctaatgaatggagtttcccattttgtgagtgtcct
agctccctctgtcagcaacgcctatgtcaggttggttctgagccacagctggcagaagag
cagcacatgaacaacaatgagccacgacacacatttcaagagagctgtactgaagtgtat
tgtgatggagtacaagatgagtccttccactgccagacaatccctaacaatccaggttca
gaatcaaacgtgggagagatcggtgaagaagctgtgtag
DBGET
integrated database retrieval system
