Chiloscyllium plagiosum (whitespotted bambooshark): 122564229
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Entry
122564229 CDS
T08871
Name
(RefSeq) general transcription factor II-I-like
KO
K03121
transcription initiation factor TFII-I
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122564229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122564229
03036 Chromosome and associated proteins [BR:
cpla03036
]
122564229
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122564229
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
122564229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
SAVED
Motif
Other DBs
NCBI-GeneID:
122564229
NCBI-ProteinID:
XP_043574862
LinkDB
All DBs
Position
28:complement(40257565..40395964)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAQVGTSPIIQEEPSSAENLLAVKFLMSALESMCQEIAKSKAEVACIAVYEKDIFVVGTE
RGRSFIGSRKDFQTDFVKYCVAEEQKAAEKLRNEDVLCVTPVALDNKTDIGTKRKSVEEL
FSSLYGKALGKPTPSPVPYDKILKDPAAVVIQGLPDGVCFKHPSCYDSVTLKKILEQKSQ
LAFVIKRPFQDAAIHRVEKKQPTGKENSQMPPASFVPVQVKTEPSDDNQPSTSVEPVAIK
AEPEDPDYYRYSVQGPSATTSEASDTEAAPQSKSYQESGPQKDADVSSDETEEEFTADDS
TQQEYSETSEDPEVEVTIEDDEYFPPNKRPRNTVQPTDTGTMVKRKSREFNFEQWNARIT
ELRKQVEDLFESKYAQVTLATGPVVIPYPLFQSNSEDLCVDGLPEGIPFRRPSTYGIPRL
ERILLAKDRIKFVIKKPELLATEQEETAPDKTVPGAKEEWNTRITKLRRMVEELFSKKYA
EAMGQTQAMIVPYRKFESHPKELYVEGLPDNIPFRSPSWYGIPRLEKILQASDRVKFVIK
RSDLLVNEQTESNVQRLNLTGSGPNTDHFRDRLMPSFADAAGKEDWNIRITKLRKQVEEI
FNTKFAEALNLPEPVKVPYPLFESNPQHLYVEGLPDGIPFRSPTWFGIPRLERIIRGSAK
VKFFVKKPELVEPHLPDRLKKGKRTDGTPPSNRGRRRVSRPPEPNLARTVKDSSSSAPEK
VQVPTTPSSPEIEVTIEASDETPPVKAVGNITQANDSNATFKQRGREFSFEQWNAKITEL
KQQVETLFNEKCSEALGVSEPVRVPYALFESHPDDFYIEGLPDGVPFRRPSTFGIPRLEK
ILRAKAKIKFIIKKPDLFQTALQEASKRPQTRSQTSLEEKTPEVKKPAPPTTIAAPTAGL
ENRAAALPTATGVEDLNIIQVTVPEGENEKVSKVEKARQLREQVNDLFSKKFGEAIGMNF
PVKVPYRKITINPGCVIVDGMPPGVPFKAPSYLEISAMKKILESANFIKFTVIRPFPGLL
INNQLAEQSGTEVPPDAVAAPSTTPPPPPSVVQISAFNYRLKADCRHFHHKANKLIIQCL
ESHEVAFVAIFKKLAKFANSDSLKNTIRDRVVYDLRCEETQKRLLMERILELKKALEIIV
SMELAAQKSSSFKLEYDNPQNGG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttggaacttcaccaatcatacaggaggagccctccagtgctgaaaatctt
ctggcagtaaaattccttatgtcagcactggagtctatgtgccaggaaattgcaaagtca
aaagctgaagtggcttgtattgctgtgtatgagaaagatatatttgtcgtggggaccgag
cgaggaagatctttcattggaagccgaaaggattttcaaactgattttgtcaaatactgt
gtggctgaggagcaaaaggcagcagaaaaactcagaaatgaagatgttctttgtgtgaca
ccagttgcattggataataagactgacattggaacaaaaagaaaatcagttgaggagctg
ttctcttcactgtatggtaaagctcttgggaaacctactccaagccctgtgccatatgat
aagatcttgaaggacccagccgctgttgtaatacaaggactgcctgatggcgtgtgtttt
aagcacccttcatgttatgacagtgtgacactaaaaaagattttggagcaaaagtcacag
cttgcatttgtaataaaaaggccatttcaggatgctgccattcatcgtgtggaaaagaaa
cagccaactggaaaggaaaactctcagatgccacctgccagctttgttccagttcaggtg
aaaaccgagccatctgatgacaaccaacccagcacatccgttgagccagttgcaatcaaa
gcagagccagaagatccagattattatcgatacagtgttcaaggacctagtgcaactact
tcagaagctagtgatactgaggcagctccccagtcaaagtcttaccaagaaagtgggccc
cagaaagatgctgatgtatcaagtgatgagactgaggaggaatttacagctgatgattcg
acacagcaggaatattccgaaactagcgaagacccagaagttgaagtaactatagaagat
gatgaatattttccaccaaacaaacgaccaaggaatactgtacagccaacagatactggg
accatggtgaaaaggaaaagtagggagttcaattttgaacagtggaatgccagaattacc
gagttgagaaaacaagttgaagatctttttgaaagcaaatatgctcaagtcacactcgct
accgggccagttgtgatcccatatccactcttccagtccaactctgaagacctttgtgtt
gatggtttacctgaaggcattccatttagacggccatccacttatggcattccaagattg
gagaggatcctactagcaaaagatcggataaaattcgttattaaaaaaccagaattgttg
gcaactgaacaggaagaaactgctccagacaaaactgtccctggagcaaaagaagagtgg
aatacccgaatcactaaactaaggagaatggttgaagaacttttcagcaagaaatacgct
gaagccatgggacaaacgcaagcaatgattgtgccctatcgcaaatttgaatcgcatcct
aaagaactctacgtggagggcttacctgacaacattccattcagaagcccttcttggtat
ggtattcctaggttagagaagatcctacaagcaagtgatcgggttaagtttgttattaaa
agatcagatctactggttaatgagcaaactgaatccaatgtacagagattaaacctgaca
ggttctggccctaacactgatcattttagggacagactgatgccatcttttgctgatgct
gcagggaaagaagattggaatatcagaattactaaactaagaaagcaggttgaagaaata
tttaatacaaaatttgctgaagctctgaaccttccagaaccagtgaaggttccatatcca
ttatttgagtccaatccacaacatctctatgtagaagggctgccagatggaattccgttc
agaagccctacatggtttggaatacctagactagaaaggatcattcgaggaagtgcaaaa
gtaaaattttttgtgaaaaagccagaacttgtggagcctcacctccctgatagattgaag
aaaggaaaacgcactgatggaaccccacccagcaacagagggaggagacgtgtttcccgt
ccacccgagccgaatttagcacgaaccgttaaagactccagcagttctgcaccagaaaaa
gttcaagtaccgacaactccaagcagcccagagattgaagttaccattgaagcttctgat
gaaactcctccagttaaagcagtaggaaatattacacaagcaaatgattcaaatgctaca
ttcaaacaaagaggcagggagttctcttttgaacagtggaatgcgaaaatcactgagttg
aaacagcaagtggagacattgttcaatgaaaaatgcagtgaagcattgggtgtttcagaa
ccagtgagagtaccttatgcattgttcgaatcacatccagatgacttctacattgaaggc
ctgcccgatggtgtccctttcagaaggccgtcaacctttggaattcctaggttggaaaag
attctccgagcaaaagccaagatcaaatttataattaagaaaccagatttgtttcagact
gcattacaggaagcttccaaacgaccccagacaaggtcacaaacctccttggaagagaaa
acaccagaggtgaagaagccagcaccacctactactattgctgctcccactgcaggttta
gaaaatcgagctgctgcgttacccactgcaacgggtgttgaagaccttaatatcattcaa
gttacagtcccagaaggtgaaaatgaaaaagtatcgaaagtggaaaaagccagacaactg
agagaacaagtaaatgacctgttcagcaagaaatttggcgaagcaattggaatgaacttc
ccagtgaaggttccttacagaaagataaccatcaatcctggatgtgttatagttgatggc
atgcctccaggagttccctttaaagcaccaagttaccttgaaataagtgccatgaaaaaa
atcctggaatctgcaaactttatcaaatttacagtcataagaccttttccagggcttcta
attaataaccagctagctgaacaaagtggaacagaggtaccaccagatgcagtagcagca
ccatcaacaactcctcctccacctccatcggtggtacagatttctgcttttaactatcgg
ctaaaagctgattgcaggcacttccaccacaaagccaacaaactcattattcagtgttta
gaaagccacgaagtagcttttgtagcaattttcaagaagttagcaaaatttgcaaattcg
gacagcttaaaaaatactatcagagacagagtggtgtatgatttaagatgtgaagaaacc
cagaagaggttactgatggaaagaatcctggaactaaagaaagcactggaaataattgtt
tcaatggaactagcagcccaaaaaagctcatcatttaagctcgagtatgacaatccacaa
aatggtggctaa
DBGET
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