Chiloscyllium plagiosum (whitespotted bambooshark): 122564358
Help
Entry
122564358 CDS
T08871
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122564358 (dennd4c)
Membrane trafficking [BR:
cpla04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122564358 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
122564358
NCBI-ProteinID:
XP_043575050
LinkDB
All DBs
Position
2:complement(138677620..138830331)
Genome browser
AA seq
1936 aa
AA seq
DB search
MIEDKGPRVSDYFVVAGLTDTSTPLEEEITISETKSTGPKAPIIDLAVIIKSAGENVPEG
YTCIETTPTGLQANLNFGSLKSPEMHLCYKRGRDKPPLIDIGVLYEGKERLIPGCEILQA
TPYGRCANVNNSSTTSQRIFITHRRAPLNRPQNSLAVTDICVIITSKGETPPHTFCKVDK
NLNCGMWGSSVYLCYKKSVPASNSIAYKAGLICRYPEDDYELFPLSESVPLFCLPMGATI
ECWAPQTKYPLPVFSTFVLTASSAEKVYGAAIQFYEPYPMEVLTEKQLMQLGLITAVGKK
LITTKSVHTNKCICLLSRWPFFEAFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVPFPS
AQRPRILVQLSALDALILSQPVSTPLPLRGANFSTLLMNLGAENCATLLYFVLMENKVLL
HSLRPAVLTGVAEAVVTMIFPFHWQCPYIPLCPLSLAGVLNAPIPFIVGVDSRYFDLYDP
PLDVVCVDLDTNTIYLSDDRKNLNWKQLPKKPGKTLFSSLVNLQNQLSLIHRRAQEGSAV
EMTPIEADFSWHKKMISLEMEIQEAFLRFMASILKGYRTYLKPITQAPSEKTTSANSLFD
LQGFLKSRDRAHNKFYVQLTKTQMFIRFIEECSFVSDKDAGLAFFDDCIDKLFHSDKGTE
KGTKVDSDYTEDTKLIELDESQKSEHTVFIMPLEPPPTDGKDSPGKFSYKTFPVLKPELF
DRPQELKMPVSLLVGATIPSSPALMAKRTKQEIKTAHKIAKKYFSIPALWSKCLFSHCYS
LWFICLPAYVGVSYSKVKALQQAYDVLIKMRNMKVDPLDEVCYRVLMQLCGLLGHPVLAV
RVLFEMKNAGVQPNAITYGYYNKAVLESPWPSSNRSGCFLWTKVRNVVRGVSQFRQVFKK
SSSSSLQVPLFSGGSDTDAVSHGSVDSSNDANNGEHVLFVRDLIRLDSTDNHGSTGAQSD
QGYGSKDELRRDDTEETLIEIDSSSTIKEERGKGSNSSDVDQSVSNNSKNSSLPEKLHSC
SSIVKLQCATVGKQGNNDHLASLLLDSNDHYQDGDGVGDSSTQAHRPNSGKTQQRQKFWA
ERSCSFSADTRSNMLLKKGTLETDPNEIAETMGADAKILAAALCNAKDMSKMKTAPLLDD
STHQTAQGQGGDSRAIFDASENRISHMMEPSDPYHVDAESTMKSNNSVFVKGDLQIEPEA
ILPIREENQDPMQNRTSVHSAMKSVEREDVKVGFDPLSLLASETEKKIPSKIEEKTLPPV
VSRKLADEIEMYMNLKSPLGGKSASMELHKTEIEEKPSNDHDGVHCHAQERRSSLPLSPA
PPEDVQTPSKSVSRSKTFAGQPKIPVSQKMRSTSLTALVRNSQHGSLGSIVTSFSGFKID
NLLSGPKMDVLKSGMKQAANVASKMWGAVASAYSYSDDEDEHFDDSRFNFPPGIQDYSCS
GGPTERVGLPMTVPTNGLNQSNTSLGGSSNSSDTGKQPLTGAAHSSKVGKENDPEKSDRG
SSQCASTSSIFQNCAMEVLMSSCSQCRVCEALVYDEEIMSGWSADDSNLNTTCPFCKNTF
LPVLNIEFKDLRDTGSFFLKSSVSGDSLHSNSVTTGAEPAIQKAATVPAASNTVNSADSP
IPISTQEESSSEDKCVLPKDSEDLLDNVNNELPKRTASLIRSYSVGGPLQNLDVSQRPAH
GISTTSLPNSLQESVDSVGLKSRPNPKPVSVPYLSPLVLRKELESLLENEGDQVVHSSKF
INQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNKGMQMSQSNLSQDSKLVYIQLLWDN
INLHQEPGDPMYIRWRNRNKDLLGGLTPDSQVEKSSLHIIVRSIQTNDVFGPMCLILKES
SKHPEIKRQRSMYREILFLSLVALGRENIDIDAFDREYRAAYERLTEEQVKVALPIDSPP
CTKIEWCRKCFEPPFI
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagataaaggccccagggttagtgactactttgtagtcgcaggcctaactgac
acatctacaccattggaagaagaaatcactatatcggagactaaatcaacaggaccaaaa
gcaccaataatagaccttgctgtcataatcaaatcggcaggagaaaatgtaccagaaggt
tacacttgcattgagactactcctacgggacttcaggcaaacttgaattttgggagcttg
aaaagcccagaaatgcatctttgctacaaaagggggcgtgacaaaccgcctctgattgat
attggggttttatatgaagggaaggaacgtcttattccaggctgtgaaattttacaagca
actccctatggccgttgtgctaatgttaacaacagttcaacaacctctcagcgaatcttc
attactcatcggagggctccgttgaacagaccgcagaattctttggctgtgactgatatc
tgtgttattattaccagtaaaggagaaactccacctcacactttctgcaaagtggataag
aacttgaactgtggcatgtggggttccagtgtttatctttgttacaagaagtctgttcct
gcatcgaattcaattgcatataaagctggattaatatgcagatatcctgaagatgattat
gaattatttccactgtctgaatcagttcctctcttctgtcttcccatgggagctacaatt
gaatgctgggctccccagactaagtacccactgccagttttctctacctttgtgttgact
gcctcatcagcagagaaggtatacggtgcagctatccagttttatgaaccttacccaatg
gaagttcttactgagaaacagctcatgcaactgggcctcatcactgctgtgggcaagaag
ctcatcaccaccaagtctgtgcataccaataaatgcatctgtcttctctcacgctggcca
ttttttgaggcatttcgcaagttcttgatgtttttgtacaagctttcagtctctggacct
catcctttgcccattgaaaagcatatatcccacttcatgcataatgttcccttcccatca
gcccagaggccaagaatcttggttcagctgtcggcacttgatgccttgatcctgtctcag
ccagtttcaacccccttgcctttgagaggagcaaactttagcactttgctaatgaacttg
ggtgccgagaattgtgcgactttactatattttgtcttgatggaaaacaaagttctgctg
cactctctcaggcctgcggtgttgaccggtgtggctgaagctgttgtaactatgatattt
cctttccactggcaatgtccttatattccactttgtccattgtccctcgctggagtcctc
aatgcccctattccatttattgtaggtgttgattcacgctattttgatctttatgatcca
cccctggatgttgtgtgtgtggacctggatacaaatacaatatatctatctgatgatcgg
aaaaatttaaactggaagcagcttccaaaaaagcctgggaagacactgttcagttcattg
gtgaatctacaaaaccaactttcactgattcacaggagagcacaggaagggtctgctgtt
gagatgacgccgatagaggctgacttttcatggcataaaaagatgatttcattggaaatg
gaaatccaggaagcttttttgcgtttcatggcctcaatattgaaaggatatagaacatac
cttaaaccaataacccaggcaccttctgagaaaaccacttctgcaaattcactttttgat
cttcaaggattcttgaaatctcgagatagagcacataataaattctacgttcagttgact
aaaacacagatgtttattcgcttcattgaagagtgttcttttgtgagtgacaaggatgca
ggccttgcattttttgatgactgcatagataagctttttcattctgataaaggcacggag
aaaggaaccaaggtcgattctgactacactgaagatacaaagctaattgagctggatgag
tcacagaagagtgaacacactgtgtttataatgccgttggagcctccaccgacagatggt
aaagattcaccaggaaaatttagctacaaaacttttccagtgcttaaaccagagctgttt
gacagaccacaggaattaaaaatgccagtcagccttttagttggagctacaatccctagc
agtcctgccctcatggcaaaaagaacgaaacaggagataaaaactgcccataaaattgcc
aagaaatacttctcaatccctgcactttggtccaagtgcttgttcagccattgttacagc
ctttggttcatttgcttaccagcatatgttggggtctcctattccaaggtcaaagcatta
cagcaagcatacgatgttctcatcaaaatgagaaatatgaaggtggatccattggatgag
gtgtgctacagggttctgatgcaattgtgtggactcttgggccacccagtacttgctgtt
cgagttctgtttgaaatgaaaaatgcaggtgtgcaaccaaatgccattacatacggttat
tacaacaaggctgttttggaaagtccctggcccagcagtaatcgcagtggttgcttttta
tggacaaaagtgcggaatgtggttcgtggtgtatctcagtttcgtcaagtatttaagaaa
tcaagttcctcaagccttcaagtgccattgttctcaggtggaagtgatacagatgctgtg
agccatggcagcgtggatagttctaatgatgctaacaatggagagcatgtgctgttcgtc
cgagatctaatcagactagattccaccgataatcacggtagcacaggcgcccagtcagac
caagggtatggatctaaagatgaacttcgacgtgatgacactgaagaaacgctgatagaa
attgactcatcgagtacaattaaagaggaaagaggtaaaggctcaaacagctctgatgtg
gatcaatcagttagcaacaacagtaagaattccagcttaccagaaaaacttcattcgtgt
agcagcattgtaaagctgcaatgcgctactgttggcaaacaaggaaataatgaccatttg
gctagcctgctactggacagcaatgaccattatcaagatggtgatggagtgggtgactct
agtacccaggcacataggccaaacagcgggaagacccagcagcggcaaaagttctgggca
gaaaggagctgcagtttcagtgctgatacacgttcgaacatgttacttaagaaagggacc
ctcgaaactgatccaaatgagatagctgagactatgggtgcagatgccaagatcctggct
gctgctctgtgcaatgccaaagatatgtccaagatgaagaccgctccattattggatgac
tcaactcatcaaacagcgcaaggtcaaggtggtgacagcagagccatctttgatgcttca
gagaacagaatctcacatatgatggaaccatcagatccatatcatgttgatgctgaaagt
acaatgaaatcaaacaattcagtttttgtaaagggtgatttacagattgaaccagaagca
attcttccaattcgtgaagaaaatcaagatccaatgcagaataggactagtgtgcactct
gcgatgaagtctgtagaaagagaagatgttaaggtaggttttgatccattatcattactg
gcctcagaaacagagaagaaaatcccttccaaaatcgaagagaagactttaccaccagtt
gtgtctcgaaaacttgcagatgaaattgaaatgtatatgaatcttaagagccctcttggg
ggtaaatcggccagtatggaactgcacaaaactgagattgaagagaagccatcaaatgac
catgatggagttcactgtcatgcacaagaaagaaggtcaagtctcccattgagccctgct
ccaccagaggatgtacaaacaccatccaagtctgtctcaaggtcaaaaacatttgctggg
cagccgaaaataccagtttcgcagaaaatgcgttcaacttcactaactgccttggtgcgg
aacagccagcatggctccttggggtccatcgttacatcattttcaggatttaagattgac
aacctgctgtctggacccaagatggatgtacttaagtcaggcatgaagcaagcagcaaat
gttgctagcaagatgtggggagctgtggcatcagcgtactcctactctgatgatgaggat
gaacattttgatgattcaagattcaactttccgcctggtattcaggattatagctgcagt
ggaggcccaactgaaagagtaggtctgcctatgacagtgccaacaaatgggcttaaccaa
agcaatacaagccttggtggcagcagcaacagcagtgatactggtaaacagcccctgact
ggtgctgcacattcatctaaagtaggaaaggaaaatgatcctgaaaagtcagatcgtggg
tcttcccagtgtgccagtacatcaagtattttccagaattgtgcaatggaggtattgatg
tccagctgttctcagtgtcgtgtctgtgaagctttagtttatgatgaggagattatgtct
ggctggagtgcggatgattcaaatcttaacaccacttgtccgttttgtaaaaatactttt
ttgccagttctaaacattgagtttaaggatctgcgagatactggaagttttttcttaaag
tcgagtgtatctggcgatagtttgcacagtaacagtgtaaccacaggagctgaacctgcc
atacagaaagctgccactgttccagcagcatccaatacagtaaattcagcagattcacct
attcccatatcaacgcaggaagagtcctcttctgaagataaatgtgttttaccaaaagac
tctgaggatttgctggacaatgtaaacaatgaacttccgaaacggacagcatctttaatc
cgaagttacagtgtaggtggtccattgcaaaatttggatgtatctcagcggcctgcacat
ggaatttcaacaaccagccttccaaatagtctacaggaaagtgtggactccgtgggcctt
aaaagcaggccgaatccgaagcctgtgtccgtcccatatctgagtccgttagtcctgcgt
aaggagctggagtctctgttggagaatgagggagatcaggtggttcacagctcgaagttc
atcaaccagcacccaatcattttttggaaccttgtttggtatttcagaaggctggatttg
ccaagcaacctgccaggtctcatccttacttccgaacattgcaataaaggcatgcagatg
tctcagtcaaatctttcacaggacagcaaactggtttacatccagctactctgggataac
attaatcttcatcaagagcctggtgatccaatgtatatacgttggagaaaccggaacaaa
gatttgcttggtggattaactccagatagtcaggtggagaagagttccctgcatataatt
gtgagaagtatccagaccaatgatgtgtttggaccgatgtgcctaatcctcaaagagtcc
agcaaacaccctgaaatcaagagacaaaggagtatgtacagggaaattcttttcctttct
ctggtggcccttggaagagagaatattgatattgatgcttttgatagagaatacagagca
gcttacgagcgcttgacagaagaacaagtgaaggtggccctgccaatcgattcaccaccc
tgcaccaaaatagaatggtgccggaaatgttttgagcctcccttcatctaa
DBGET
integrated database retrieval system
