Chiloscyllium plagiosum (whitespotted bambooshark): 122564390
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Entry
122564390 CDS
T08871
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122564390 (tdp2b)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
122564390 (tdp2b)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
UBA_8
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
122564390
NCBI-ProteinID:
XP_043575116
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Position
29:complement(14931241..14973021)
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AA seq
390 aa
AA seq
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MGEPQRKRARLSDPEQQGPQHEEPSDGAAPISQPEEEEEEEEEEEEEAARRRYRGGLCDE
FAVVTGTDEAVAQCYLAENDWLLERAVNSYFETAVQPSSSTMESTSHMIENTDFQGCIDL
TNTDNEQTSKGSTAQPQVDESRISLLTWNIDGLDLENLQERARGVCACLALYSPDIVFLQ
EVIEPYYLYLKKRAVSYTIIPGDEDDYFTAIMLRKSRVKLLKQEITPFPTTSMKRNLLAV
QVNIAGNELCLMTSHLESTKAHSKERVKQLEIVLRKIKEAPESATVIFGGDTNLRDQEVT
KVGGLPEGVLDVWEFLNKPEHCRYTWDTKANNNLKAPYTCRLRFDRVFYREASEGQIVPQ
QMTLVGQDKLDCGRFCSDHWGLLCDFDVIL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagccccagaggaagagagctcgtttgagcgacccggaacaacagggtccccag
catgaagagccgagtgatggagccgctcctatatcccagccggaggaggaggaggaggag
gaggaggaagaggaagaagaagcagcgaggcgccgataccgcgggggtctttgcgatgag
tttgctgttgtgaccggtacggatgaggccgtagctcagtgttacctggcggaaaatgac
tggcttttagaaagagctgtcaactcctattttgaaacagctgttcagccatcttcctct
acaatggagtctacttcacatatgattgaaaatactgatttccaaggatgcattgatttg
acaaacactgacaatgagcagaccagcaagggaagtactgcacagccacaagtagatgaa
agtcggatctcattgttaacgtggaacatagatggacttgatctggaaaacttgcaggaa
agagcacggggagtttgtgcgtgcctagcactatatagccctgatatagtgttcctgcag
gaagttattgaaccgtattacctttacttaaagaagcgagcagtcagctacacaattatt
ccaggagatgaagatgactacttcacagccattatgctgagaaaatctcgcgtaaagtta
ttgaaacaagaaataacacctttcccaactacctctatgaagagaaaccttcttgctgtt
caggtaaacattgcaggaaatgaactctgtttaatgacttcccacctggagagcactaaa
gcacattcaaaggaacgagtcaaacagcttgagattgtactaaggaaaatcaaagaagca
ccagaaagtgccacagtaatatttggtggtgacaccaatttgagagatcaagaggttaca
aaggttggaggtttgccggaaggtgtcttggatgtctgggagttcttaaacaaacctgaa
cattgtcgatatacctgggacactaaagctaataataacctaaaggctccttacacttgc
agactccgctttgatcgtgtgttttacagggaagccagtgaaggtcagatagttccacaa
caaatgacccttgttggacaagacaagttggattgtgggcgtttttgtagtgatcattgg
gggctcctttgtgactttgatgtcatattgtga
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