Chiloscyllium plagiosum (whitespotted bambooshark): 122564434
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Entry
122564434 CDS
T08871
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04621
NOD-like receptor signaling pathway
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122564434
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122564434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122564434
Pattern recognition receptors [BR:
cpla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122564434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
WHD_NOD2
LRR_4
WHD_MCM7
AAA_16
AAA_22
NPHP3_N
AAA_18
NB-ARC
nSTAND3
Mitofissin
AAA_30
Motif
Other DBs
NCBI-GeneID:
122564434
NCBI-ProteinID:
XP_043575218
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All DBs
Position
29:complement(23367173..23409293)
Genome browser
AA seq
932 aa
AA seq
DB search
MDETAACKHQVASYLKLLTEHRVQLVNEIKNIECILDNLLQSGYFTTEDKELVQRKQTRY
DKVREILDIICNKGPEAAEYFVYVMYKAKDVYPELQDWIKIIEYQPPEHLVRKTILLTDA
VCQYSEKLRHQLKRETKFITSYAQKEDILLDDTYTETLMERVNAVGETEGPISHLEDLFS
DTGIINEDAEIVFITGDAGVGKTILLQRLQKLWSKGELCTGVKFFFKFRCRMFNIFEKED
KISLRDLLFKYNCYPDKDTDEIFSYIQQHPDSVLFTLDGFDEINADCDFSDIPVISSPFD
LMHPVTLLLNLLHGNLLKNSRKLLTARTGTELPLRMVRKRVTLKGFTKDHLLQYLKKFFK
NQPHQTLVLTQLEANPHLCSLCSVPLFCWIIFKCYEHLQSECNSQQMLDYVTLTDIYLLM
LEVFLNRSFKTRLNKRNKSQSETFKAKKDSLMRLGKLAKEGIKSNNFIFSQEQITAAGIS
EEDLQLGFIKSVGHYDGCGNQSTYEFLHLTLQSFFTAFFLVVNERIRAKGIIKFFTGKIP
HGGKSHPLNCSVSCKNSKRSSKEHLLEAREHFQLTVFFLCGLLSKTKLDVLSHLTCQISI
QKKRAVLKSYLVGCVKTYTSNDFYQMQAVPRFKWLVRCIFEVHSKEVARLAAKRIHQDYI
KFTYCNVYSADCSAITFILRGIQKTIGLELDNNNINDYGVRELIPCFSKLRIIGLNANQI
TDEGVQVLSEELKKYKIVQFLGLYKNQITDIGAQYISTLIDECPSLLKLAIGYNMITSEG
GKRLAWAVQKSKTIKHLWMWGNQVGDLGAEAFAQALRNHPSLKKLSLAGNGISTEGSKYL
AASLEDNRCLKTLWLTANKLDDEAMKWFGDVLKVNRSLQTLWLIENNITLTGVKHLIDAL
KINSTIQEICLKSNKISIEETKALIGEQRIVF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggatgagacagcggcctgtaaacatcaggttgcctcttaccttaaactcctcacagaa
catcgggttcagttggtgaatgaaattaaaaacattgagtgcatcctggacaatcttcta
cagtctggatatttcaccacagaagacaaggaacttgtacagaggaagcaaactcgatat
gataaggtgcgtgaaatccttgacataatatgcaataaaggacctgaagctgctgagtat
tttgtgtatgtgatgtacaaggctaaagacgtttatcctgagctgcaggattggataaaa
ataattgagtatcagccacctgagcatttagtgagaaagacgattcttctcacagatgct
gtttgccaatattctgaaaaacttagacatcaattgaaaagggaaaccaagttcatcact
tcgtatgctcagaaagaagacatcttgctggatgatacttacactgagactcttatggaa
cgagttaatgcagtaggtgaaactgaaggacccatttcccacttggaggatttgttcagt
gacacgggcatcatcaatgaggatgcagagatagtttttataactggtgatgctggggtt
ggtaagaccatactgctccagagacttcagaaactctggtccaaaggagagctgtgtact
ggtgttaaattcttctttaaatttagatgtcgcatgttcaatatctttgaaaaggaagat
aagatttctctcagagatctactgtttaaatacaattgttatccagacaaagacactgat
gagatatttagttacatccaacaacacccagactctgtcctcttcacactggatgggttt
gatgaaattaatgctgactgtgactttagtgatatacctgtaatctcttcaccctttgac
ctcatgcatcctgtcactcttttgttgaacctacttcacggaaatttattgaaaaactca
agaaaattattgactgcaagaactggcaccgagctaccattgagaatggtaagaaagaga
gtgacactgaagggctttacaaaggaccatttattgcaatatttaaagaagttcttcaaa
aaccaaccccatcaaactttggttttgacccagttggaagcaaaccctcacctttgtagt
ttatgttcagtgccattgttttgctggattatatttaaatgttatgaacacttacagtca
gaatgtaactctcagcaaatgttggattatgtaacgttgactgacatctacctattgatg
ttagaggttttcttaaaccgttctttcaaaacgaggttgaacaaaagaaacaaaagtcaa
agtgagacattcaaagcaaagaaagattctctgatgagattgggaaaattggcaaaagag
ggaatcaaaagcaataacttcatctttagtcaggagcaaatcacagcggctggtatctca
gaggaggatttacagttgggctttatcaagagtgtaggccactacgatggatgtgggaac
caatcaacctatgagttccttcatctgaccctccagtcatttttcaccgcgtttttcctg
gttgttaacgagagaattcgggcgaagggaatcattaagttttttaccggaaagatacca
catggagggaaatcacatccactcaactgttcagtctcctgcaaaaactccaagagaagc
tcaaaagaacacttgctcgaggcccgagaacatttccaactaactgttttctttctttgt
ggcttgctttccaaaaccaagttggatgtactgagtcatttgacttgccaaataagcatt
caaaagaagagagcagttttgaagtcctacctggttggctgtgtgaaaacgtacacaagc
aacgatttctatcagatgcaagctgtcccgcgtttcaaatggctggtgaggtgcatattt
gaagtgcacagcaaagaagtagccagacttgctgccaagagaattcaccaagattatata
aagttcacctattgcaatgtctactcagcggactgcagtgcaatcacttttattttacgt
ggcattcagaaaacaattgggctcgaactagacaataacaatatcaatgactacggagtg
agagaactaattccttgctttagtaagcttcgcattattgggttgaatgcaaatcaaatc
acagatgagggagttcaagtgctatctgaagaacttaaaaagtacaaaattgttcaattt
cttggcttatacaaaaatcagattacagacattggtgcccaatatatttcaacacttatt
gatgaatgtccaagtctactcaaattggccattggttacaacatgattacatctgaagga
gggaaaaggctagcatgggcagttcagaaaagtaagacaatcaaacatctctggatgtgg
gggaatcaagtcggagacttgggtgctgaagcatttgctcaagctttaagaaatcatcct
tctttaaaaaagctcagtcttgcaggaaatggcatttccacagagggaagtaaatattta
gctgcctcattggaagacaacagatgcctgaagacactctggctcacagcaaacaaactg
gacgatgaagcaatgaagtggttcggagatgtgctgaaagtaaataggagcctacaaacc
ttatggttgattgagaataacattacattgactggagtaaaacatctcattgatgcactg
aaaataaacagtacaatccaagagatttgcctgaagagcaataaaatatccattgaagaa
accaaagcccttattggagagcaacgcattgtgttctga
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