Chiloscyllium plagiosum (whitespotted bambooshark): 122564435
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Entry
122564435 CDS
T08871
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04621
NOD-like receptor signaling pathway
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122564435 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122564435 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122564435 (nod1)
Pattern recognition receptors [BR:
cpla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122564435 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
LRR_4
NOD2_WH
HTH_MCM7
AAA_16
AAA_22
NPHP3_N
AAA_18
PIF1
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122564435
NCBI-ProteinID:
XP_043575221
LinkDB
All DBs
Position
29:complement(23412245..23471003)
Genome browser
AA seq
945 aa
AA seq
DB search
MDTVFQPGLHQVSIVSAHSFTKLLKLHREVLVGCIKNTECVLKNLIKHEYISTEEAELSQ
QHPTQAAKVRKILDLVESKGEETAEYFIHILHQANEIYTDLSPWLKEIEYQPSEHILGKS
VIITDAVCQYIQKIKHGLRQDTKFVTSYVQKEDILLDDAYTETLMELINGVNETKGTISN
LEDLFSDTGIINEDADTVFVTGDAGVGKTILLQRLQNLWSKGELCANVKFFFKFRCRIFN
SFREEDKISLRDLLFKYNCYPDKDTDEIFSYIRQHPDSVLFTLDGFDEISVDCDLSDIPD
VSSPFDPTHPITLLMNLLRGKLLKGSKKLLTARTGTNLPLRMVRKRVTLKGFTKDHLLQY
LKKFFKNQPHQTLVLTQLEANPHLCSLCSVPLFCWIIFKCYEHLQSECNSQQMLDYVTLT
DIYLLMLEVFLNHSSKTRLNKRNKSQSETFKAKKDSLMRLGKLAKEGIESNNFIFSQEQI
TAAGISEEDLQLGFIKSAGHYDGCGNQSTYEFLHLTLQSFFTAFFLVVNERIRAKEIITF
FSKCDHYLTGPQANIVFLRCLGYKSHHRKDPFETNEHLQFTTLFLCGLLCKAKRDLFKHL
SSTGSIQKKRSALKTYLADCVKSHLKNLPQAPFEEFCRVQALPRFVWLMRYIFETQSEAV
ASLAAKGICADYIKLTFCNAFSADCSAIANILRHRKKSIALELDNNNINDYGVKELIPCF
DKLTVVRLSVNQVTDDGAKVLAEELLKYKIIKILGLYRNQITDVGARFIAQIVEECPHLR
TLKIGLNKLTSEGGKLLAQAIQKSKAIKDVGMWGNQIGDVGAAAFAEAIRNHPSLKELSL
AANRISAEGGKSLAAALQDNRCLEIFWLTENQLNDEAAALFAEALRVNKSLLHLWLINNR
ITEVGANCFFKILKENTTIEEICLNGNNISAEGAKRLAEEQRILL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggatacagtgttccagcctgggttgcatcaagtgtcaatagtttcagcacactcattt
accaagttgctgaagttgcaccgagaggtcttagttggttgcatcaagaacacagagtgt
gtgctgaaaaacctgataaagcatgaatacatttccactgaagaggctgagctgtcccag
cagcatcctacgcaagcagcaaaggttcgaaaaatattggatctggttgagagcaaagga
gaagaaacagcagagtatttcatacacattctgcaccaggccaatgaaatttacacagac
cttagcccatggctgaaagaaatagagtatcaaccatcagaacacatactaggcaaatca
gtaattatcacagatgctgtctgccagtacattcaaaagattaaacatggcctacggcag
gacacaaagtttgtcacttcgtacgtccagaaagaagacatcttgctggatgatgcttac
accgagacacttatggaactaatcaatggagtcaatgaaacaaaaggaactatttccaac
ttggaggatttgttcagtgacactggaatcatcaatgaggatgcagacacagtgtttgta
actggtgatgctggggttggcaagaccatactgctccagagacttcagaacctgtggtcc
aaaggagagctctgtgctaatgttaaattcttcttcaaatttagatgccgaatattcaat
agctttagagaggaagataagatttctctcagagatttactgttcaaatacaactgttac
cctgacaaggacactgatgagatatttagttacatccgacaacacccagactctgtcctc
ttcacactggacgggtttgatgaaattagtgttgactgtgaccttagtgatatccctgat
gtctcttcaccctttgatcccacacatcctatcaccctgttgatgaaccttctccgagga
aagttgttaaaaggttccaaaaaattattgactgccagaactggtacaaatctaccattg
agaatggtgagaaaaagagtgacactgaagggctttacaaaggaccatttattgcaatat
ttaaagaagttcttcaaaaaccaaccccatcaaactttggttttgacccagttggaagca
aaccctcacctttgtagtttatgttcagtgccattgttttgctggattatatttaaatgt
tatgaacacttacagtcagaatgtaactctcagcaaatgttggattatgtaacgttgact
gacatctacctattgatgttagaggttttcttaaaccattcttccaaaacgaggttgaac
aaaagaaacaaaagtcaaagtgagacattcaaagcgaagaaagattctctgatgaggttg
ggaaaattagcaaaagagggaatcgaaagcaataacttcatctttagtcaggagcaaatc
acagcggctggtatctcagaggaggatttacagttgggctttatcaagagtgcaggccac
tacgatggatgtgggaaccaatcaacctatgagttccttcatctgaccctccagtcattt
ttcaccgcgtttttcctggttgttaacgaaagaattcgagcgaaggaaatcattacgttt
ttttcaaaatgtgaccactatttgactggacctcaagccaatattgtttttttgagatgt
ttgggttataagtcacatcacagaaaggacccatttgaaacaaatgaacacctgcagttc
accacacttttcctctgtggcctattgtgtaaagctaagagggacttattcaaacattta
tcttccacagggagtatccaaaaaaagcggtcagcactcaagacctaccttgccgactgc
gtaaagtcacacttaaaaaatctgcctcaagcaccatttgaagaattttgtagagtgcaa
gccttgccccgatttgtctggttaatgcgctacatttttgaaacccagagtgaagctgta
gccagtcttgcagcaaaggggatttgcgcagattatatcaagctcactttctgcaatgca
ttctctgctgactgcagtgcaattgcaaacatattacgtcatcgtaaaaaatcaattgca
cttgaactggacaacaataatatcaatgactatggagtgaaggaactaattccttgtttc
gataaactcactgtagttaggttgagtgtaaaccaggtcacggatgatggagctaaagta
cttgctgaggaactcctaaagtacaaaattattaagatccttggcctgtacagaaatcag
atcactgatgttggtgcccggtttattgcccaaattgttgaagaatgcccacatcttcga
acattaaaaattggactcaacaaacttacaagtgaaggagggaaattattagcacaagca
attcagaaaagtaaggccatcaaagatgtcgggatgtggggaaatcagattggagatgtg
ggtgcagctgcttttgctgaagctataagaaaccatccttcattaaaagagctcagcctg
gcagccaatagaatttcagcagagggtgggaaaagtttggcagcagctctgcaagacaac
agatgcttggagatattttggttgacagaaaaccaattgaatgatgaagcagctgcatta
ttcgcagaagcactcagggtcaacaaaagcctgcttcatttatggttaataaacaacaga
attacagaggtgggagcaaattgtttcttcaagatactcaaagaaaatacaacaatagaa
gagatttgcctgaatggtaataatatctctgctgaaggagctaagaggctcgctgaagaa
caaaggattttgctgtga
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