Chiloscyllium plagiosum (whitespotted bambooshark): 122564461
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Entry
122564461 CDS
T08871
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122564461
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122564461
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
122564461
NCBI-ProteinID:
XP_043575314
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All DBs
Position
29:28973123..28988762
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AA seq
448 aa
AA seq
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MPDMNMDSDCNMAPVTSGNGKLRQWLIDQIDSGKYPGLVWENEDKTIFRIPWKHAGKQDY
NREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVDRSQLDISDPY
KVYKIIPEGAKKAGSKQMSMEGPQISINHHSYPTYPSMPPQIPNYIVQHERGWRDYEQPH
PELSYQCPTVPFPPRNHHWQGPGCDNGYQVTGSFYACAPTESQAPGISIEPTMRSAEALA
LSDCRLHIFLYYRETLVREVTTTSPEGCRIAHGQDDKLFAASNIDQVLFPYPDSNSQRKG
IEKLLSHLEKGVLLWMTPDGLYAKRLCQSRIYWEGPLAPYSDRPNKLERDQVTKLFDTQQ
FLAELQSYAHHGRSLMPRFQVVLCFGEEFPDPQRSRKLITAHIEPVFARQLFYFTQQNSG
HLLRGFEIPDHVNSPEDYHRTIRHSIQD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccagacatgaatatggattcagactgcaacatggctccagtaacttccggaaacggc
aaacttcgccagtggttgattgatcagattgacagtgggaaatatcccgggctggtctgg
gagaatgaagacaagacgattttccgcattccttggaaacacgccgggaaacaggattac
aaccgagaggaggatgcggcacttttcaaggcttgggcacttttcaaaggcaaatttcgt
gagggaattgacaagccagaccccccaacttggaagaccagactgagatgtgccttaaac
aagagcaatgattttgaggaattggttgaccgcagtcaactcgacatctcagatccatac
aaagtgtacaaaattattccagaaggagcaaaaaaagcaggatcaaagcaaatgagcatg
gaaggtccacagatatcaattaaccaccattcatatcctacatatccatcaatgccaccc
cagatacccaactatattgtacaacatgaacgtggctggagagattatgaacagccgcat
ccagaactctcctatcagtgcccaactgtgccatttcctccacgaaaccaccattggcaa
ggccctggttgtgataatggttatcaagtgactggatcattttatgcttgtgcaccaact
gaatcgcaagcacctggtatttcaatagaacctactatgagatctgctgaagcactggcc
ctttcagactgtcgactacacatttttttgtattatcgagaaaccctggtgagagaagtg
acaacaacaagccctgaaggttgtagaatagcccatggccaagatgataagctatttgca
gctagcaacatagatcaggtgctgttcccttatccagacagcaattcacaacgcaagggt
attgaaaaactactcagtcacttggagaagggagtcctgctgtggatgacacctgatggt
ctctatgccaaacgattgtgccagagcagaatctactgggaaggacctttagcaccatac
agcgacaggcctaacaagctggagagagaccaagtcacaaaactttttgacacacaacag
tttttagcagaactacaaagctatgcacaccatggtcgatcacttatgcccaggttccaa
gttgtgctctgttttggtgaggaatttccagatccacagagatcaagaaaacttatcaca
gcacatatcgagccagtgtttgccaggcagcttttttacttcactcaacagaacagtgga
cacttgcttagagggtttgaaatacctgatcatgtgaacagcccagaggattatcacaga
accattcgacattcaatccaagactaa
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