Chiloscyllium plagiosum (whitespotted bambooshark): 122564536
Help
Entry
122564536 CDS
T08871
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3A-like isoform X1
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122564536
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122564536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Holin_9
Motif
Other DBs
NCBI-GeneID:
122564536
NCBI-ProteinID:
XP_043575523
LinkDB
All DBs
Position
29:complement(38137407..38184711)
Genome browser
AA seq
589 aa
AA seq
DB search
MEEVRPSWDNPLQFVFACISFAVGLGNVWRFPYLCQMHGGGGFLIPYMIMLVVEGLPLFY
LELTLGQLMRQGSIGAWKTVNPYLVGVGIGSLVISFLVCVYYNAIVSWSLWYLFHSFENP
LPWAHCPLNANNTAILEECAKSSPTEFFWYRKTLNISPTIDDTGTLHWGLLLCLILSWLI
VYLCIIRGTESTGKVVYVTACFPYFVLIIFLIRGVTLHGAGNGLVYMFTPKVEQLMNPKS
WIDAATQIFFSLGLGFGSLIAFASYNQKNNNCEKQAVIIALINSLTSVFASVVTFAIYGF
KATYNYESCLERMLLLLTNTFDLEETAVQTDTLDDWINFLNSTQPNKFATIASQIEKCDL
QSHLDTAAEGTGLSFIVFTEAIVNMPGPSQIWSILYFLMLLMLGIGSMLGNAAGVITPLS
DMKIISKYLPREVMIGIVCLVACVIGLVFNIGSGNYWFSIFNDYAATLALLVIVLVEVIG
ICYVYGLRRFRKDIEKMMGRKPNWYWVVTWVFVSPVLIIGLVIFYIVDYSITGTLTYTAW
NAAEGHSVKLEYPPYALAVIGLLVSVSTVCIPLAALVTYIKKKLQREKY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgagaccatcgtgggacaatcctttacagtttgtatttgcctgcatctcc
tttgcagtgggactaggcaatgtgtggcgctttccttacttgtgtcaaatgcatggagga
ggtggatttttaattccttacatgataatgttagttgtggaagggctgcctttgttttac
ctggaattgactttgggccaattgatgaggcaaggaagtataggagcatggaagactgtt
aatccatatttggttggcgttggaataggaagtctggtgatatcatttctggtgtgtgtc
tactacaatgcaattgtgtcgtggagtctttggtatctgttccattcgtttgagaaccct
ctgccgtgggcacactgtccattaaatgcaaacaacactgcaatcctggaagaatgtgca
aagagttcacccactgaattcttctggtacagaaagacattaaatatttcgcccaccatc
gatgacacagggacattgcactgggggcttttgctgtgtctgatcctctcctggcttata
gtttacctctgtatcattagaggaacagaatcaactggcaaggtggtctatgtaacagct
tgctttccatatttcgtgttgataatttttctcattcgaggggtaacactacatggagca
ggaaatggcctcgtttacatgttcactccaaaggtggagcagctgatgaacccgaaatct
tggattgatgcggctacccagattttcttctcgctcggcctgggctttgggagtctgatt
gcgtttgccagttacaaccagaaaaacaacaactgtgagaaacaagcagttatcattgct
ttaattaacagtctgacatccgtgtttgccagcgttgtcacttttgccatatatggtttc
aaagctacatataattatgaaagctgtcttgaaagaatgctgttacttctaacaaacact
tttgacctggaagaaacagcagtacaaacggacactcttgatgactggataaatttcctg
aattcaacacaaccgaacaaatttgcaacaattgcatcacagattgaaaaatgtgacctt
cagtcccacttggacacggctgcagaaggaactgggctctcatttatagtcttcactgaa
gcaattgtgaacatgcctgggccatctcagatctggtcgatattgtattttctgatgctc
ctgatgttgggcatcggtagtatgctggggaacgccgctggtgtcatcactccgctcagc
gacatgaagatcatttccaaatatctgccaagagaggtcatgatagggattgtgtgtctc
gtagcttgtgttattgggcttgtgtttaacattggatcggggaattattggttctccata
ttcaatgactatgcagcgaccttggccctgctggtgatcgttttggtggaagtcattggg
atctgctacgtctacgggctaagaagatttcggaaagacattgaaaagatgatgggacgc
aaaccaaactggtactgggtggtcacctgggttttcgtaagccctgttttaatcataggt
ctcgtgattttttacattgttgactacagcataacaggaacactaacgtacactgcctgg
aatgcagctgaggggcattcggtgaagctggaatatcctccttacgctctggctgttatt
ggactcctggtgtccgtttccacagtttgcattcctctggctgcattagttacatacata
aagaagaagctccaaagggagaaatattag
DBGET
integrated database retrieval system
