Chiloscyllium plagiosum (whitespotted bambooshark): 122564558
Help
Entry
122564558 CDS
T08871
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122564558 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122564558 (drosha)
03009 Ribosome biogenesis [BR:
cpla03009
]
122564558 (drosha)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122564558 (drosha)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
122564558 (drosha)
Messenger RNA biogenesis [BR:
cpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122564558 (drosha)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
RNase
122564558 (drosha)
Prokaryotic type
rRNA processing factors
122564558 (drosha)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
122564558 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
122564558
NCBI-ProteinID:
XP_043575559
LinkDB
All DBs
Position
29:40812399..40994645
Genome browser
AA seq
1383 aa
AA seq
DB search
MSFHPCRGAAAHTGHGVMPKVGGARGRVTPGGRAPQQSFEAGAGGGGFRPVHPPPPLFPP
EQQQLAPPMPPPPPPPPPPPRFPSPQSPAYPGPGFLAYPPHIPQASEPRPGPAAQQLRPR
PPYPGPPVPRSGFPCFTPAPNVGGAERGAGYQPLMAQAQAPLLPPQQATFQPPYPLPYPQ
AYPLQHFGGTGYPQAAGAGGYPPGAGAVIHPGPGPGGYHNVPSPQQPPPGLGSGPPAEHF
RDKPQRAPPARASGGRHEAERDNRHKDRAYRNREQRRSPPQARPERRDSRDRPRERDRDR
RVDCGRRRISHDRERTPGRHRGRGHSRDRHKHHDNYRSPSYERSHRRDRKRTHSRSSSRE
RKRPRWENERDRRSAGHSSSKEKSQSTTRSKEVEANPFSENIEEEKEEEELLNTKPVWIR
CTHSENYYSSDPMDQVGDSTVVGTSKLRQLYAKFDEELGQRQEKARAARPPWEPPKTKLD
EEPDDSSSDSGCDSDDNSSGSSTCSSDSEIIDVIEEIKRRKAHPDRLHEELWYNDPGQMN
DGPLCKCSAKAKRTGIRHSIYPGEEPNEACRPMTNNAGKLFHYRITVSPPTNFLTDRPTV
IEYDDHEYIFEGFSLFSHTPLNNIPLCRVIRFNIDYTIHFIEEMMPENFCVKGLEMFASF
LFKDILELYDWNIHGPVFENGVPSCPRFHFLPRFVRSIPDSGKEVLSMHQVLLYLLRSSK
PLVPEEEIANMLQWEELEWQKYAEECKGMIVTHPGMKPSSVRIDQLDREQFNPEVITFPI
IVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLAQREEALQKIRQK
NTMRREVTVELSSQGFWKTGVRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYMFKERC
LLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSR
LGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYFLFPNLEEGGLATYRTAIVQNQHLAM
LAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLEEGKHLFGRLLFNG
SDLRDVWLNYPLHPLQLQESNTDRPLIATSPVLKKLTDFEETIGVNFIHIRLLARAFTLR
TVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVA
EELGMQDFAITNDKTKRPVALRTKTLADLLESFIAALYIDQDLDYVRTFMNVCFFPRLKE
FILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKILQTVGPSHARTYTVAVYFKGERIGC
GTGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELREMRREREQQEKDPSETEE
SRK
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcatccgtgccgaggggccgctgcgcacactggccacggggtgatgccgaag
gttggcggtgcccggggcagggtaaccccgggaggtcgggccccccagcagtccttcgag
gccggtgctggagggggtggctttcggcctgtccacccgccgcctccattattccccccc
gagcagcagcagctcgctccgccgatgccccctcccccaccgccacctccccctcctccc
cgcttccccagcccgcagagcccggcttacccaggcccaggcttcttggcctacccgcca
cacatccctcaggcctcagagcctcgcccggggccggccgcccagcagctgaggcctagg
cctccctaccccgggcctccggtaccacgctcgggattcccatgcttcacgccggcgccg
aatgtgggaggcgcggagcgtggggcgggttaccagccgctgatggcccaggcccaggct
ccgctcctacccccacagcaggcgactttccaaccgccgtacccgctgccttacccccag
gcctacccgctccagcatttcggcggcaccggttatcctcaggccgcgggagcgggcggt
tatcctccgggagcgggagctgtcatccatccgggcccaggccctgggggttaccacaat
gtcccgtcgccacagcaaccgccgccaggcctggggtcagggccacccgccgagcacttc
cgggacaagccgcagcgcgcgccgcctgccagagcgtccggagggcggcacgaggctgag
cgcgataaccgccacaaggacagggcctaccgtaaccgggagcaacggcggagcccgcct
caggccaggcctgaacgccgagacagcagggacaggcccagggagagagacagggacagg
agggtggactgcggccgcaggaggatcagtcacgaccgggagaggacaccgggccggcac
cggggccgcgggcacagcagagacaggcataagcaccatgacaattaccgatcaccatcc
tatgaaagatcacacagacgagatcggaaaaggacgcacagccggtcaagcagcagagaa
aggaagcgccctcgctgggagaatgagagagatcgaaggtcagcaggtcacagttcaagt
aaggagaaatctcaatccaccactcgaagcaaggaggttgaagcaaatcccttctctgaa
aatattgaagaggagaaggaggaagaagagctgctgaatacaaagcctgtgtggatccgc
tgtactcactcagagaattactattccagtgatcccatggatcaggtgggtgactccact
gttgttggcacaagtaaactacgacagctttacgcaaagtttgatgaggagcttgggcag
aggcaggaaaaggcaagagctgccagaccaccctgggaaccaccaaaaaccaaattggat
gaagaaccagatgacagctccagtgattcgggctgtgactcggatgataacagcagcggg
agtagcacctgcagctcagactctgaaatcatcgacgtcattgaggaaatcaaacgtcga
aaggcacaccctgatcgactacatgaggagctttggtacaatgacccaggccagatgaat
gatggtccattgtgtaaatgtagtgccaaggctaaacgaactgggattcgacatagcata
taccctggtgaagagccaaatgaggcatgtcgtccaatgactaataatgcagggaaatta
ttccactacagaatcacagtgtccccacccacaaactttctgactgatagaccaaccgtg
atagagtacgatgaccatgaatatatcttcgaaggattttcgttgttttctcacactcct
cttaataacattccattgtgcagggtcattcgtttcaatatcgactataccatccacttc
attgaagaaatgatgccagagaacttctgtgtgaaaggattggaaatgtttgcctcattc
ttatttaaggatattttagagctttacgactggaatattcatggtcctgtatttgaaaat
ggtgttccatcttgtccaaggtttcatttcctgccccgctttgttagatcaatacctgat
agtgggaaagaagtcctgtcaatgcatcaggtgctgctttatctgttgcgcagcagtaaa
cccctggttcctgaggaggagattgcgaatatgctgcagtgggaggagttggaatggcag
aagtatgcggaagaatgtaaaggcatgatagtaacccacccaggaatgaaacccagttct
gttcgtattgaccaattagaccgggagcagtttaaccctgaggtcataactttcccgatt
atagttcatttcggcattcggcctgctcagctaagttatgctggagacccacagtatcag
aagctgtggaagagttatgtcaaactgcgtcacctgctagcaaacagccccaaggtcaaa
caagcagacaaacagaaactggctcagcgagaggaagctttgcagaagatccgtcagaaa
aatacaatgcgacgtgaggtaacagtcgaactgagcagtcaaggtttctggaagactggt
gtccgctcagatgtctgtcaacatgccatgatgttgccagtgttaacccaccatatccga
taccatcagtgtctgatgcacttggataagctgataggctatatgtttaaagaacgctgc
ctcctccagcttgcaatgacccacccaagccaccacctgaatttcggaatgaacccagat
cacgcacgcaactctttgtcaaactgtggcatccgacagcctaagtatggagataggaag
gttcatcacatgtatatgaggaagaaaggtataaatactttaatcaacattatgtcacgc
cttggtcaagatgacccagcaccatcaagaattaaccacaatgaacgactggagttcttg
ggagatgctgtggttgagtttttaacaagcgtacacttatactttctgtttccaaatctg
gaggagggtgggttagctacctaccgcactgcaattgtgcagaaccaacaccttgctatg
ttggccaagaaactggaattggaccgtttcatgctgtacgcccacggacctgatctctgc
agggaatctgatttacgtcatgcgatggctaattgttttgaagctctgataggtgctgtc
tacttggaaggtggccttgaagaaggcaagcacttgtttggtcgactgctgttcaatggc
tcggatctgcgggatgtatggcttaattatccacttcatcctttacaactacaggaatca
aatacagacaggcctctcattgccacttctcctgttctaaagaagctgactgattttgaa
gaaacaattggagtgaattttattcacatacgtcttctggctcgagccttcactttacga
accgttggatttaatcatctaacactgggtcacaatcagaggatggaattccttggtgat
tctataatgcagttggtagccactgagtacttattcatccatttccctgaccatcatgaa
ggccatttaacgcttttgcgaagttccctggtcaataatcgtactcaagccaaagtggca
gaagagctgggcatgcaggactttgccatcacaaatgataaaaccaaacgacctgtggct
ctacgtaccaaaacccttgctgaccttttagaatcgttcatagctgcactttacattgac
caggatttggactatgttcgcactttcatgaatgtatgcttcttcccacgattgaaggag
tttatcctgaaccaggattggaatgaccctaaatctcagcttcaacagtgctgcctgact
cttcggacagaaggcaaagagccagacatccctttgtacaagattcttcagacagtgggg
ccatcccatgccaggacatacactgtggctgtatatttcaaaggagagaggattggttgc
ggtacaggtccaagcattcaacaagcagaaatgggagctgctatggatgcattggaaaaa
tataactttccccagatggctcatcagaagcgcttcattgagcggaaatacagacaggag
ttgagagaaatgaggcgggaaagagagcaacaggagaaggatcccagtgagaccgaggag
agcagaaaataa
DBGET
integrated database retrieval system
