Chiloscyllium plagiosum (whitespotted bambooshark): 122564562
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Entry
122564562 CDS
T08871
Name
(RefSeq) cadherin-12-like isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122564562
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Major cadherins
122564562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Stevor
DUF443
ASFV_J13L
Orf78
RIFIN
Motif
Other DBs
NCBI-GeneID:
122564562
NCBI-ProteinID:
XP_043575571
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Position
29:43747118..44331509
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AA seq
798 aa
AA seq
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MLTVNCLSLFLWILLDEGLLTPLESLSPRSSAHTGSDNIIELSGDGIPKLQRVRRGWIWN
QFFVLEEYMGSEPQYVGKLHSDLDNGDGSVTYTLLGQGAGSIFTIDEITGDIHAIKSLDR
EEKSYYVLRAQAVDTETGRPVEPESEFIIKVQDINDNEPKFPDGPYVADVPEMSPAGSFV
VQITATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIRTALSNMDREVKEEYQVIIQA
KDMGGQMGGLAGTTMVNITLTDVNDNPPRFAKNVFHLKVPESTTVTSEIGRIKANDADIG
KNADIDYSIVPGDGLNVFGIISNKTTQEGIISLKKPLDYENKKSYVFKVDAVDPHPDEHF
QSMGPFKDTATVKITVLDVDEPPIFSRPFYIMDVYEDTNVGSIIGAVTAQDSDVSNSPVR
YSIDENTDQERYFTIDEIDGTIATNDVLDREDISQYNISVVARKVSNPDLVSKVPVTIQV
LDVNEYAPEFSVPYETMMCENTKTGQIIMTISAEDKDMPPTTPQFHFRLSPEAATNPNFT
IHDNGNNTAGILPKRNSYSRRQLELYFLPVVVSDSGYPVQSSTNTLTIRVCGCDVDGTIL
SCNVEAIFLPVGLSTEALIAILLCIIILLVIVVLFVALRRQRKKEICMTSKEDIRDNVIS
YDDEGGGEEDTQAFDISTLRKPDLIEDVQLRRDVKPESHHPQRQTIIIQNHTDIRDFIDQ
RVQENDADPSAPPYDSLVTYAYEGNCSIAESLSSLDSVPTDTDQDYDYLTNWGPRFKKLA
DLYSPEKTNSQQSNTERQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgtgaactgtttgtcgctgtttctttggattctgttagatgagggtctttta
acacctcttgaatcactgtcaccaaggagttcagcacacacaggcagtgacaacataatt
gagctgtctggagatggaattcctaaactccaacgtgttagacggggctggatctggaac
cagttctttgtactggaagaatacatggggtcagaacctcagtatgtgggaaagctacat
tcagacttggacaacggtgatggttctgtgacctatactctgttaggtcaaggagctggc
tcaatcttcaccatcgatgagattacaggagatattcatgcaataaagagcctggatcgt
gaagaaaagtcttattacgttctgcgtgcacaggctgtagatacagaaaccggaagacct
gtggaacctgaatcggaatttatcattaaggttcaggatatcaatgacaatgagccaaag
tttccggatggaccttacgttgctgatgtcccagaaatgtctcctgctggttcctttgtt
gttcaaataacagcgacagatgctgatgatccaacatatggaaacagtgccagggtggtg
tacagtatcctgcagggacagccatacttctctgtggatcccaaaacaggtgtcataaga
accgctttatcaaacatggaccgagaagtgaaagaagaataccaagttatcattcaggcc
aaagacatgggtggtcaaatgggaggcttagcagggacaacaatggtcaatatcactctc
actgatgttaatgacaatccaccaaggttcgccaaaaacgtctttcatctgaaagttcct
gagtcaaccacagttacttctgaaattggtagaataaaggccaatgatgctgatattggg
aagaatgcagacatcgactacagcatcgtgcctggagatggactaaatgtgtttgggatt
atctctaacaagaccacacaagaaggaattataagtctgaaaaagccattggattacgaa
aataaaaaatcctacgtcttcaaagtagatgcagtagacccccatccagatgaacatttc
caatcaatgggccctttcaaagacacagcgacagtgaagattacagtcttggatgtagat
gagcctcccatcttcagtagacccttttacataatggacgtttatgaagataccaatgtg
ggcagtatcatcggtgcagtgacagcacaggattctgatgttagcaacagtcctgtcagg
tactcaattgatgagaatactgaccaggagagatatttcacgattgatgagattgatgga
acaattgcgaccaatgatgtcctggacagagaagatatttctcagtacaacatctctgtt
gtagccagaaaagtcagcaaccctgatctggttagcaaagtccctgtgaccattcaagtt
ttagatgttaatgaatatgcaccagaattctcagtgccttacgagaccatgatgtgtgaa
aatacaaagactggtcagatcattatgacgatcagcgcagaggataaagatatgccacct
actacaccacaatttcatttcagattgtcacctgaggctgctaccaatcctaacttcaca
atccacgacaacggaaacaacacagctggaatcttacccaagagaaatagttacagtcgc
aggcagctagagctctatttccttccagtggtggtctcagacagtggttaccctgtacaa
agcagcacaaacacactgactattcgagtctgcggatgtgatgtggatggtactatctta
tcctgcaatgtagaagctatcttcctcccagtgggcttgagcacagaagcactgatagca
atcttgctctgcatcattatactccttgtgattgtggtgctgtttgtggcattgagaagg
caaaggaaaaaggagatctgtatgacatcgaaagaagatatcagagacaatgtaatcagt
tatgatgatgaaggaggtggtgaggaggacacccaggcttttgacatcagcaccctgagg
aaacctgacttgatagaggatgtgcagttgcgcagagacgtcaagccagaaagccaccat
ccgcagcggcagaccatcataatacaaaaccacacggacattagagacttcatcgatcag
agagtgcaggagaatgatgcagatcccagtgcacctccttatgattccctggtgacatac
gcttatgaaggaaactgctcgatagctgaatcactcagctccttggattcagttcccaca
gacacagatcaggattacgattacctcactaactgggggcctcgctttaaaaaacttgca
gatctttattctccagagaaaactaacagccaacaaagtaataccgaacgacagtaa
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