KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122564570
Entry
122564570         CDS       T08871                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082  ATP-dependent chromatin remodeling
cpla03083  Polycomb repressive complex
cpla04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122564570
   03083 Polycomb repressive complex
    122564570
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122564570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpla03036]
    122564570
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     122564570
  Histone modification proteins
   HAT complexes
    HATB complex
     122564570
   HDAC complexes
    Sin3A-HDAC complex
     122564570
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     122564570
    PRC2.2
     122564570
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     122564570
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122564570
  Chromatin remodeling factors
   NuRD complex
    122564570
   NuRF complex
    122564570
   NuRF complex (fruit fly)
    122564570
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122564570
NCBI-ProteinID: XP_043575596
LinkDB
Position
29:48193046..48274858
AA seq 484 aa
MTDKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGLPKMHQFQTGH
FQLT
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaccgacaaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcacctgtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgccgtggaa
gaacgtgtcattaatgaagaatacaagatctggaagaaaaatactccctttttgtatgac
ctggttatgacgcatgctctggaatggccaagcctgactgcacagtggttgcctgacgtt
tctagacctgagggaaaggactacagtgttcacaggctggtgctgggaacccacacatct
gatgagcaaaaccatttggtcatagccagtgttcaactgccaaatgatgatgcgcagttt
gatgcttcacattacgatagtgagaaaggagaatttggtggatttggttctgttagtgga
aagatagagattgaaataaaaataaatcacgaaggggaagtaaatcgtgctcgttacatg
cctcagaatccttgcattattgctactaagactccctccagtgatgtgttggtctttgat
tatacgaaacatccttccaaaccagatccctctggtgagtgcagtccagatcttcggtta
cgtgggcaccagaaagaaggctatgggctctcgtggaatccgaatctaagtggccattta
cttagtgcttcagatgatcatactatctgcttatgggatattagtgctgtacctaaagaa
ggaaaaatagttgatgcaaagactatctttactggtcatacagcagtagtagaagatgtg
tcatggcacttgctgcatgagtcactgtttggttcagtagcagatgatcagaaactaatg
atctgggatacaagatctaacaatacatctaagccaagtcactccgttgatgcacataca
gcagaagtgaactgcctctcattcaatccttacagtgaatttatcttagcaactggttct
gctgataagactgtagcattgtgggatttaagaaacctgaaactaaagttacattccttt
gagtcacacaaggatgaaattttccaggttcagtggtctcctcataatgaaacaatcctg
gcatcaagtggaacagatcgcagactaaatgtgtgggatttgagtaaaattggagaagaa
cagtcacctgaagatgccgaagatggtcctccagaactgttgtttattcatggtggtcac
acagctaagatctcagacttttcttggaatccaaatgaaccatgggtaatttgctctgta
tctgaagacaatatcatgcaagtttggcagatggctgaaaatatttacaatgatgaagat
cctgagggagctcctgatccggaaggcctaccaaagatgcatcaatttcagactgggcat
tttcaattaacttga

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