Chiloscyllium plagiosum (whitespotted bambooshark): 122564701
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Entry
122564701 CDS
T08871
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2 isoform X1
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122564701 (trub2)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122564701 (trub2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
122564701
NCBI-ProteinID:
XP_043575749
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Position
30:complement(2879959..2893224)
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AA seq
335 aa
AA seq
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MAGGSRSALLRLHGVFAVYKPPGIHWKRTRDTVESKLLNELNTLEQPVIQQQIRFVPSLI
NNENGNETQLTVTQVPVLASHPRVTGPRFVGLKVGAGHRLDWQSSGVLVLGVGNGNKQLN
GLHHCHLTKEYIVKGSFGTATEDFSNTGRVIERTTYDHITQDRLERIIAVVQGSHQRALL
TYSDVDLKSQEAYELASRGLLRPMNKSPPIITAIRCVHFSPPSFTLEIQCLHETQQYLRK
LVHEIGLELRSSAVCTHVRRTRDGIFTVDNTLIRTQWDLPSILAAVQASRLKVKGKLREN
SWRLSASSEEGTCTGVKARGLEKGTHCLGPTAVRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggttcccgctccgccctgctcaggctgcacggtgtgttcgccgtttacaaa
ccgcccggaattcactggaaacggactcgagacaccgtggaaagcaaactactgaatgaa
ctcaacaccttggagcagccagttattcagcagcaaatccggtttgtgccaagtttaatc
aacaatgagaatggaaatgaaacccaactgactgtaacccaagtcccagtactggccagt
cacccacgagtgacaggtccgagatttgttggtctgaaggtgggggctggtcaccgcctg
gactggcaatcctctggtgtgctggtgctgggtgttggaaatggaaacaagcagctaaac
ggtctccaccactgccacctgaccaaggaatacattgtgaaaggcagctttggaacagca
actgaggacttctcaaacacaggcagagtgattgagagaacaacttatgatcacatcaca
caggacaggctggagcgtatcatcgccgtggtccagggcagccaccagcgagcactgcta
acgtattcagatgttgatttgaaaagccaggaggcctatgagcttgcgtcccgggggctg
ttacggcccatgaataaatcccctccaatcattaccgctattcggtgtgtacacttctcc
cctccaagcttcacgctagagatccagtgtctccatgagacccagcagtacctgcggaag
cttgtccatgagatcggtttggagctgaggtcatcagcagtgtgtacccacgttcgccgc
acgcgggatgggattttcacagtggacaatacgttaatcaggacgcagtgggacctgccg
agtatactggctgctgtccaggccagccgactgaaagtgaaaggcaagctgcgagagaac
agctggaggctctcggcctcctctgaggaaggcacgtgcacaggggtcaaagccaggggc
ctagagaaaggaactcactgtctgggacccacagcagtgagggactga
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