Chiloscyllium plagiosum (whitespotted bambooshark): 122564736
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Entry
122564736 CDS
T08871
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122564736 (lrsam1)
04121 Ubiquitin system [BR:
cpla04121
]
122564736 (lrsam1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122564736 (lrsam1)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
122564736 (lrsam1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122564736 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
zf-C3HC4_3
LRR_4
LRR_1
Prok-RING_4
SAM_1
SAM_2
zf-RING_2
ZnF_RZ-type
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122564736
NCBI-ProteinID:
XP_043575811
LinkDB
All DBs
Position
30:complement(5823680..5915441)
Genome browser
AA seq
726 aa
AA seq
DB search
MMLFTRKKKQSEEARKRLEYQICLAREAGADDILDISKCELYGIPVSVFSMCRVLQKKVL
IVHTNHLSTLLPKSCNIQDLSMLKILDLHDNDLSSLPEDMGQLLSLQVLNVEQNLLKSLP
NSLATLAQLQTLNLKGNRIRKVPESLSGLRSLRTLDISQNRIQILPQDLAHIRTLESLSL
DAEAMTYPPASVCSNGTEAIKQFLCKELGIEYMPPSQYLLPVLESDRNITESDGADGVFR
QQMQEAEQWQSKFMDYEKRKEQKQQEKLDFERRLNEEQRERTQLILLNNSHKEQVLMSVK
QEQGKLDQDLRDQQRHLEVERQRLQEELKRGEHGATNLIRSLLEDSERRKQNSMLLESLE
KERLRMDQLMAISQEENERLRKREVAAAMREMLSESSMNKILQMVYETRRRQLVNEASSS
MTEMDGKLQQIQAWQQLDQNKTISQILSEAEMQKVAFEVLQMKKDSKHSRIRDQIKLIEN
ELMQLTQIELDRRENDTENLQETLMGERQALSDLLQQLLKEKKQRETELRDLLAEMETKH
ETSQENYWLIQYQRLMDQKPLSLRAREEGVEKALVDILAELSADQYLPLFAHHRVTLKML
RYMTAEDLQQIGVRESRLQRAILRRVQESGPEEDQELVPTKETAADVGESQPSAPSEDKA
TPSSPAAVSEEVLAQLECVVCLEQESQMIFLPCGHVCCCQTCGTELSTCPLCRKDIEQKI
RIYRTS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcttcactcggaagaagaagcagagcgaagaggcgcggaaacgactggaatat
cagatatgcctggcccgagaggcaggtgcagatgatattctggacatctcaaaatgcgag
ctgtatgggattccagtcagtgtgttctccatgtgcagagtcttacagaagaaggtttta
attgttcacaccaatcacttgtcaacattgctgccaaagtcatgtaacatccaggatttg
tcaatgctgaagattctggatctccatgacaatgacctcagctcgctccccgaggatatg
ggtcagctgttatcccttcaggtgctcaatgtggaacaaaatcttttgaaatctctccca
aactctcttgcaaccttggcgcaacttcaaacattaaacctaaaagggaaccggatccgg
aaagtgccagaatctctgagtggactgaggagtctacgaacattggacatcagtcaaaat
cggattcagattctcccacaagacctggctcatatcaggacactcgagtcccttagcctc
gatgcagaagctatgacctatcctccagccagtgtgtgcagcaatgggacagaagccatc
aaacagtttctgtgcaaagagcttggaatcgagtatatgcctccctctcagtacctgctc
ccggtgctggagagtgataggaatataaccgagagcgacggagctgatggcgtgttccga
caacagatgcaggaggccgagcagtggcagagcaaattcatggactatgaaaagaggaag
gaacaaaagcagcaggaaaagctggactttgaacggcgactgaatgaggaacagcgggag
cggacacagctcatcctgctcaataatagtcacaaagagcaagtcctgatgtcggtgaag
caggagcaggggaagctggatcaggatctcagagaccagcagcgtcacctggaggtggag
cgccagcgactgcaggaggagttgaaacggggagaacatggagcaacgaacctcatacgc
agtttgctggaggacagtgagagaaggaagcagaactcaatgttgctggaatcgctggaa
aaagagaggctgaggatggaccagctgatggccatttcacaggaggagaacgagaggctg
cgaaaaagggaagtggcagctgcgatgcgggaaatgctgtctgagagctcgatgaacaag
atcctgcagatggtttatgagacgagacggcgtcagctggtgaatgaggccagttcaagt
atgactgaaatggatggtaaactccagcagattcaagcctggcagcagctggaccaaaac
aagaccatttcacagatcctgtcggaggcagagatgcaaaaggtggcatttgaggtactc
cagatgaagaaggacagcaagcacagccgcattcgagaccagatcaaattgattgagaat
gagttaatgcagctgacacagatcgagttagacagaagagagaatgacacggagaatcta
caggaaactctgatgggagagaggcaggccctgagtgacctcctccagcagctactgaag
gagaagaaacagcgggagaccgagcttcgggacctgctggcagaaatggagaccaaacac
gagaccagccaggagaattactggttgattcagtaccagcgtctgatggaccagaaaccc
ctgtctctccgagcacgggaggagggtgtggagaaggcactggtggatatattggctgag
ctatcagcagatcagtacctgccacttttcgcccaccatagagtcaccctgaagatgctg
cgttacatgacagcagaggatctccaacagattggagtccgagaaagcagactgcaacgt
gccattctgcgacgagtccaggagagtgggcctgaggaagatcaggagctcgtcccaaca
aaggaaactgctgcagatgtgggtgagagccagcccagtgctccctcggaggataaagca
acaccttccagtcctgctgcagtctctgaggaggtcctggctcagttggaatgtgttgtc
tgtctggagcaagagagtcagatgattttcctgccatgtggtcatgtttgttgctgtcag
acatgtggaactgagttgtccacctgtcccctctgccggaaggatattgagcaaaagatt
cgcatctatcgtacctcctga
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