Chiloscyllium plagiosum (whitespotted bambooshark): 122564926
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Entry
122564926 CDS
T08871
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122564926
03041 Spliceosome [BR:
cpla03041
]
122564926
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122564926
Spliceosome [BR:
cpla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122564926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
122564926
NCBI-ProteinID:
XP_043576349
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All DBs
Position
30:complement(37668597..37756032)
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AA seq
599 aa
AA seq
DB search
MAEYGSILTPAALGLNAGHSPGPKVEAFADALQRARQIAAKIDAGSHLNNSTPVVDPAVY
GYGTQKRTLDDGVVNQLGGMVHQRTIMSEEYKVPDKMVGFIIGRGGEQISRIQMESGCKI
QIAPDSGGLPERSCTLTGSPESIEEAKRLLGQIVDRCRNGPGFHNDIDSSNSAIQEIQIP
ASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPYKVQQAKEMVME
IIRDKDQGDFRRNEYGSRIGGNSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD
DGIMTDRIAQVMGPPDRCQHASHMINELIHTAQERDGQSGFGGPGRGRGRGRSDWNMGPP
GGMQEITYTIPADKCGLVIGRGGETIKSINQQTGAHVELQRNPPPNSDPNIRIFIIRGAL
QQIEHARQLIEEKINGGPGPGGPGGFNTSPYSQGPPGHHQNGPPQAFMTQGWGSTYQPWQ
QQGQQDPSKAAQHLGTAAWSAYISQFYQQPNQQQQPTMGQNSQQNSDQNGGQTGQMDYSK
AWEDYYKILVAHCVLKLYLIAEEGLMPATPILLFLGCCLTCCAFPATHFQLYLIAVQFT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatatggcagcattctcaccccggcggcgctcggcctgaacgccggacattcg
cccggacccaaagtagaagctttcgcggacgcgctgcagagggcgcggcagattgctgct
aaaatagatgctggttcacatctgaacaattctactcctgtggtagatcctgcagtctac
ggctatgggactcagaaacggacactcgatgatggggtagtgaaccagcttgggggaatg
gtgcatcaaaggactataatgtctgaagagtacaaagtgcctgataaaatggttggattt
ataattggcagaggaggagaacagatatctcggatacagatggaatctggctgcaaaatt
cagattgcacctgatagtggaggtctcccagaacggtcctgcacgttgacaggttcgcca
gagagcatagaagaagcaaaaagactcctagggcagattgtggatcggtgtcggaatgga
cctggctttcacaatgatattgatagttccaatagcgctatacaggaaatccaaatcccg
gccagcaaagttgggcttgtcattggcaaaggaggggaaaccattaaacaactgcaggag
agaactggtgtaaaaatgataatgattcaggatggaccactccccacaggtgctgacaaa
ccactgaggattacaggagatccttacaaagtacagcaagcgaaagagatggtcatggaa
ataatcagagataaagatcaaggtgatttcaggcggaatgaatatggttccagaattgga
ggaaatagtatagatgttgctgtacctaggtttgctgttggtattgtaataggaagaaat
ggtgaaatgataaaaaagattcaaaatgacgctggtgttagaattcagtttaaaccagat
gatggtataatgacagacagaattgctcaggtgatgggacctccagataggtgtcaacat
gcttctcatatgattaatgaacttattcatactgcgcaggaaagagatggtcagtctgga
tttggcggtcctggaagaggacggggtaggggtcgtagtgactggaatatgggacctcca
ggtggcatgcaggagataacatatacaatacccgctgataaatgtggcttagttattgga
agagggggagagacgatcaaaagcatcaaccagcaaacaggagcacatgtagaactacag
agaaatccaccaccaaattctgatcctaatattcgaatattcattatccgtggagctcta
caacagattgagcatgctcgacagttaatagaagaaaaaatcaatgggggtccaggacct
ggtggccctggagggtttaacacaagcccttatagtcaaggaccacctggacaccatcaa
aatggcccaccacaagcttttatgacacagggatggggaagtacgtaccaaccttggcag
caacaaggacagcaggatccaagtaaagctgcacagcatttgggtacagcagcctggtca
gcttacatctcccagttttaccagcagcctaaccaacaacagcaaccaacaatggggcaa
aactcgcaacaaaattcagatcagaatggtggccaaactggtcagatggattattccaaa
gcctgggaggattactacaaaatacttgtggcacattgtgttctgaagctctacctgata
gcagaagaagggcttatgcccgcaacgccgattctcctgttccttggatgctgcctgacc
tgctgcgcttttccagcaacacattttcagctctacctgatagcagtccagttcacctaa
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