Chiloscyllium plagiosum (whitespotted bambooshark): 122565009
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Entry
122565009 CDS
T08871
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122565009 (sec16a)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122565009 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DIM1
Motif
Other DBs
NCBI-GeneID:
122565009
NCBI-ProteinID:
XP_043576570
LinkDB
All DBs
Position
30:45222119..45299397
Genome browser
AA seq
2291 aa
AA seq
DB search
MQSPTMQPPPPRSSPGDGSTTGAPLSGGAHNVFRRNAPYRRPNTPLSGAPATLPLPPVTD
PFGLGQQMQVNSSPSLQNAVNGGLPNLNRLAGSQLPWPTDGMPCALGERREPYGAPAPLP
PAPRFGEAGQFSPAAPLQGAEAGQALPQEPSYFHTGLGSESSEMGQARPVARNPHGQEGG
QETHSFPPAPPTFLPQFQQSSSQWAVSHGSRPPSVQNYFQPSDPQTQGFGGYCAPQPVPL
QQSHAAGSHYQQHHSPSLESQVQFLGAEHQDIAQPSPFPQLPQHQQHFSGTGFVQSEDWQ
SGPPREVCQQQAIPHSGHQADCPAPRSDPPPGDSEPGTISMFFKGGEVENKETLVSEQSS
AVSASIGEAFQPSTGPFFSAQPLPELCTGNAEPRGLGPQPPVPCGVYSISSGEPGGAVDS
TQPHDGGLVLEDDENSEFVQNQEVLPTEPDRTPVAFQPMPGLVNQGLHAIRNVSGAGPPP
NLETPDPAHHPLRCDSISSNHSSASHSSGSSLRRSHAQTNTFIQQESGKPPTDSLNRFFE
QIDSSPLSRDPLHPGREADSAGRPLYYSQLSQSPALSSPKPMTTFQASANSSFEPVRSHG
QLPVKPVEVDQAKMVMELNQSTVTTVGQRHGAGTSDISPGNLEQPPDNLENIRMPQPHSN
LYAGVGTSKSVARPVPEESHKRPSSRVSGIWVKSESPAATLWAQSELPSFSAGIMLAPAA
PAVSAAAKLEVIQPPEDSSKGLSYPVPPGNMENPPQVAEDRAQKKQTAPSYATLLVPTPA
SPTPAVLLARPLQTSPHIPSPECPLRDRGDGQSAAFASPVPPNPELVTTVQGASHAQAPL
NLAANSRITPRMGSEGQSVDPAITTSPPPSQDPGVIVTSPTSNLQPSSDSGKDEMRNRAF
DQPNPSINCELLDFTLHSTVPNQPLTSMNPAVSLPLGSTSQQSVPCHTYTTGLYMNDKAG
FYLQVTADVQQQQPITTVSGQQAVPPLPPVTHDQRQPGSLPVSGQCPSVSFGYPGSGPTQ
PPAQEQHLPTQAAVTTAAAPQHPTHHDVMPQHPYPPGQPHAGYGYAYPYMCQDYGADPQQ
PYVMPYSSYPTLDPRVGQQMSYPLTDSRGNHSYYQDDPYRRYARYGRYDVNNMSYKESER
EKTSRPSSRASQSSNRPTSRQGCTEDLYGGRSGREGYPGYYPDYYNSQYQYRDSAHWDRY
DPAAYDPRYRDYREYEMPYWYYGPYRELYTDRRNGFENLWHYDPRYDVSFDEGSRQDLYP
DEFDGHSTHSEQSVHSALSSHSVRSRRSSFGSRSQQSQIYRSQQDLTVEAPAHAASTDYT
YGQYSQSTVHPGYSDYQYRYPTETDWQPLEKAPPRPVTPEKFTVPHLCVRFSPGGQLLKV
LPNLPSEGQPALVELHSLEMILQHMPEQEDLKKFPGPLVKEETHKVDVISFAQNKATECL
RNDELLDKESASLLWELIVLLCRQNGTVIGTDIAELLLREHRSVWLPGKSPNEANLIDFN
NDLVPRAEDESCLFTDSFLDGNTTENPAKDTERFRELLLFGRKKDALESAMKHGLWGHAL
LLASKMDSRTHAKVMTRFANSLPINDPLQTVYQLMSGRMPAAATCCGDERWGDWRPHLAM
VLSNLSNGPDLDRKTITTMGDTLATKGLLDASHFCYLMAQVGFGVYTRKTTKLVLIGSNH
SWSFLKFASNGAIQRTEAYEYAQALGNQVCFLPNFQVFKFIYACRLAEMGLAAQAFHYCE
VIARTVLKNPVYYSAVFLSQLIQISTRLRFFDPQLKERSEQELHVEPDWIKHLRQIENQL
KDGALVCRSGRTTPQPFCSSTPSSEYDQVSQSDGQVAGSHEEALGMDNPLMTSFTADTGM
PGMAGVQLMPPAPPHAVLDGRPTAAPPLQPMMDSGIPMYSPTQASPGFPGQSPHSAFKQT
FEPAKGPLSTAPPGSPLGLPSEILQTVPEQQVPENTECNSVNHQMSPKRSSFGESGHQDF
YDHMVKMASGRRSRSTSQSSLHMPYGRRSRTTSESSVHSMGRERHPSAANQSTLPPPSET
IANTAPETKKEPRRKEPETKKGGWLSWLRPSKKTEAHLPDDKNKSIVWDEKKQRWVNLNE
PEEESKPLPPPPSFPVTAPTPASSSTPSAAPAPSGGPPPRNRFSMKAGTKGRYVDVLNPS
GSRPGGVLMPPVDLFAPLAPMPIPTNLFVPMPGEGSQPPEGNPAEISQPVEQANLEATAQ
PQIFNPIPNADSSPSEPVSLQHGETAAQPVHGGPASGAVPFYNPAQFPQPSAGTSGSRPG
RFGQRKYPTLN
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtccaacaatgcagcctccaccaccccgatcatcaccgggcgatggcagcacc
actggagcccccctgagtgggggggcccacaatgttttccgacggaatgctccctacaga
cggcccaatacccccctgtcaggggcccctgctacattgcctctgccaccagtcactgat
ccatttggacttggccagcagatgcaggtcaacagttcaccgtcactgcaaaacgctgta
aatggagggctgccaaacctgaaccgactagctgggagtcagctcccttggcccacagat
ggaatgccttgtgcgttgggggagcgacgtgaaccctatggtgcaccagctcccctcccc
cctgcaccccgatttggtgaagctggccagttctcacctgcagcccctcttcaaggagct
gaagctggacaggccctaccccaagagccctcatactttcatacggggctaggctcagag
agtagtgagatggggcaggcacggccagtggcgcgaaacccccatgggcaggaggggggc
caggagacccattcctttcctcccgctccacccactttcctaccacaattccagcagagc
tcctcacagtgggcagttagtcatggcagtcgacctccgtccgtccagaactactttcag
cctagtgacccccagacccaaggttttggtggttactgcgcccctcagcctgtccccctt
cagcaaagccatgcagcaggtagccactaccagcagcatcactccccatcactggaatcc
caggtgcaatttcttggagccgagcaccaagacattgcccaaccatctccattcccccaa
ctgccccaacaccagcagcatttctctggcactggctttgtccagtcggaggattggcaa
tctggtccccctcgagaagtgtgccagcagcaggctatacctcactctggacaccaggct
gactgtcctgccccacggtcagacccaccgcctggggactctgaacccggaaccatctcc
atgtttttcaaagggggtgaagtggagaacaaagaaaccctggtgtctgagcagtcgagt
gcagtcagtgccagtatcggggaggccttccagcccagcaccggacccttcttcagcgca
cagccactgccagagctgtgcactggaaatgccgaaccacggggcttaggcccgcaacca
cctgttccttgtggtgtttacagcatcagtagcggagaacctggtggggcagttgattcc
actcaaccccatgatggagggttggtgttagaagatgatgagaattctgaatttgtccag
aatcaggaggtcctgcccactgagcctgatagaactcctgtggcattccagcccatgcca
ggattggtgaaccaagggctgcacgccatcagaaatgtgagtggggcaggaccaccacca
aatctcgagaccccagaccctgcacatcatcctctgcgatgtgacagtatctcttcaaat
cacagcagtgccagtcacagcagtggttccagtctgcggagatcccacgcccagacaaat
acattcatccaacaagagagcgggaaacctcccaccgattccctgaaccgtttctttgag
cagattgactcctccccgctgagtcgagaccctttgcaccctggcagggaggcagatagt
gcagggcggccattgtactacagccagctttctcagtctcctgccctcagctccccaaag
cctatgactaccttccaagccagtgccaacagctcatttgagccagtcagatcgcatggc
caactcccagtcaaacctgttgaagtggaccaagcaaagatggtgatggagttgaaccag
tcaacagtgaccactgtggggcagaggcatggtgctggcacatcggacatctccccaggc
aacttggaacagccaccggataacctggaaaacatccgcatgccccagcctcattcaaac
ctctatgctggcgttggaacgtcgaagagcgtggcacggcctgtaccagaagagtcccac
aagagaccgtcctcgagggtgtctggtatctgggtgaaatctgagagccctgcagccact
ctgtgggcacagagtgagctgccaagcttctccgctggcattatgttggcaccagctgct
ccggcagtgtcagcagccgccaagttggaagtgatacaaccacccgaagatagcagtaag
ggtttgagctaccctgtgcctcctggaaatatggaaaatcctccccaggtggcagaggac
agagcccaaaaaaaacagacagctcccagctatgccacgctcctggtccctactccggcc
tcacctaccccagctgtgctgcttgctcggccacttcagacctccccccatatccccagc
cctgaatgtcctctccgagatcggggcgatggccaaagtgctgcctttgcgagtccagtc
cctcccaatcctgagctggtcacaacagtccaaggagcatcacatgcacaggctccactg
aacctggccgcaaacagtcgcatcacccctagaatgggcagcgaagggcagtcagtggat
cctgctatcaccaccagccctcctcctagccaagaccctggtgtgattgtaacctcccca
acttccaatcttcagccgtccagtgacagtggcaaggatgaaatgagaaacagagcattt
gatcagcccaacccgtccatcaattgtgagctgcttgatttcacgctgcacagtactgtg
cctaatcaacccttaactagcatgaatccggctgtttctctgccacttggcagcacctca
cagcagtcagttccttgccacacatacaccacagggctctacatgaatgacaaagcaggt
ttctacctgcaggtcactgcagatgtccaacagcaacagccaatcaccactgtgagtgga
cagcaggcagtgccaccactgccaccagtgactcatgaccagcgccaaccagggtcattg
ccagtcagtgggcagtgcccgtcggtcagttttgggtacccaggatctggtcccactcag
cctccagcacaggagcagcatctgccaactcaagcagcagtaacaacagcagctgccccc
caacaccccacccaccatgatgtgatgccacaacacccgtatccaccagggcagccacat
gcaggttatggttatgcctatccatatatgtgccaggactatggtgcagaccctcagcag
ccttatgtcatgccttactcatcgtaccctacactggacccgagagttggccagcagatg
tcttacccattgacggactccagaggcaaccattcgtattaccaggatgatccatatcgc
cgttatgcccgatatggcagatacgacgttaataacatgagttacaaggaatcagagagg
gagaagaccagccggcccagctcacgagcaagtcagtcttccaatcgaccaacttccagg
caagggtgcaccgaagatctgtatggtggaagaagtggacgagagggatatcctggttat
tatccagattattacaacagccaatatcagtacagagactcagctcattgggatagatat
gacccagctgcctatgatcctcgatacagagactacagggaatatgaaatgccatactgg
tactatggaccttaccgggagctctacaccgataggaggaatggatttgagaacctctgg
cactacgaccctcgctatgatgtgagcttcgatgaaggtagtcggcaggacctgtaccct
gatgagtttgatgggcacagcacacacagtgaacagtctgttcacagcgcactgagctcg
cacagcgtaaggagcaggcggagtagctttggctcccgctctcagcagagtcagatttac
aggagtcagcaggacttgactgttgaagcaccagctcacgcagccagcacagattacact
tatgggcagtattctcaaagcacagtacatccaggctactcggattatcagtacagatat
ccaacagaaacagattggcagccattggagaaagctccaccaagaccagtgacccctgag
aagttcacagttcctcatctttgtgtccggttcagtcccggtggacagttgctgaaagtg
ttgcccaacctcccttcagaaggacaacctgctttggtggagctgcacagtctggagatg
atactgcagcacatgcctgaacaagaggatctgaagaagttcccagggccactggtgaag
gaagagactcataaagttgacgttatcagttttgctcaaaacaaagccacggaatgcctg
aggaatgacgaacttctggataaagagtctgccagcctgttgtgggaactgattgtgctg
ctgtgcaggcagaatgggacagtgattggtacggatattgctgaactcctactgcgggaa
catcggtcggtttggcttcctggcaaatcgcccaatgaagcaaaccttattgacttcaac
aatgacttggttccacgtgcggaggatgagtcttgcctcttcacagacagcttcctcgat
ggtaacaccacagaaaaccctgccaaggacacagagcgcttccgcgaactgctgctcttc
ggccgcaagaaggatgccttggagtcagccatgaagcatggcctgtggggtcatgctttg
ttactggccagcaaaatggacagtcggacccatgcaaaggttatgaccaggtttgccaac
agtctgcccatcaatgaccctctgcagacagtataccagctgatgtctgggcgcatgcca
gctgcagccacgtgttgtggagatgagaggtggggggattggcgacctcacctagccatg
gtgctgtccaacctttccaatgggcctgacctggacaggaaaaccatcacgactatgggc
gacacactcgctaccaaggggctgttggatgcctctcatttctgctatctaatggcacaa
gttggatttggagtgtacaccagaaagaccaccaaactagttctgattggctcaaaccac
agctggtcctttctgaagtttgcttcaaatggggccatccagcgcacagaggcatacgag
tacgcacaggcgctaggcaaccaagtctgcttcctccctaacttccaggtatttaagttt
atttatgcctgcagactggctgagatgggtttagcagcacaagcatttcactactgcgag
gtcattgcaaggactgttctcaagaatccagtgtattactcagcagtgtttttgagccag
cttattcagatttccacccggttgcgattctttgaccctcagttgaaggagcggtcagag
caggagttgcatgtggagccagattggattaaacacctccgacaaattgaaaatcagttg
aaggacggtgcacttgtttgtaggtcgggcagaactacacctcagcctttctgttccagc
actcccagttcagagtatgaccaggtcagccagtcagatgggcaagtcgcaggctctcat
gaggaggccttgggcatggacaatccactgatgacatctttcactgcagacacagggatg
ccaggaatggccggagtgcagctcatgccaccagcccctcctcacgccgtattggatggc
aggccaacagcagcccctcccctccagccgatgatggacagtggaatccccatgtactca
cccacccaagcctcgcctggcttcccaggacagtctccccactctgccttcaagcagact
tttgagccagctaaaggccccctttctacagccccacctggatcgcccctggggctcccc
tcagagattctgcagactgtgccggagcaacaggtgcctgagaacacagaatgtaattcc
gtcaatcatcagatgtctcctaaaagatccagctttggggaaagtggacatcaggatttc
tatgatcacatggtcaaaatggcttctggaagaagatcgaggtcaacgtctcagtcgtct
ttgcacatgccctatgggagacgctcgcgaactacctctgagtcatctgtccacagcatg
ggccgagagaggcatccctctgcagctaaccagtcaacgcttccacctccatcagagacc
attgccaacacagctccggaaacaaaaaaagaacccagacggaaggaaccagagaccaaa
aagggtggttggttgagctggctgcggcccagcaagaagactgaagcccatttaccagat
gacaaaaataaatcgattgtgtgggatgagaagaagcaacgatgggtgaatctgaatgaa
cctgaggaggagagcaagcctcttcctcctccgccaagtttcccagtgacagcccctaca
cctgcctcaagttccactccttcagccgcaccagcaccctcaggtggccctccacctcgg
aacaggttctccatgaaagcaggcacaaaaggtcgatatgtggatgtcctgaatcccagt
ggatcacggcctggtggagttctgatgcccccagtggacctgtttgcccccttggcacca
atgccaatccctaccaacctctttgtgccgatgccaggtgagggatctcaacctcctgaa
ggaaacccagcagagatctctcagcctgtggaacaggcaaatcttgaggcaactgcacag
ccccagatatttaacccgataccaaatgctgattcttcaccatccgagcctgtcagtttg
cagcatggagagactgctgctcagcctgtgcatggcggccctgcatcaggagccgttcca
ttttacaaccctgcacagttcccccaaccctcggcaggaacgtccggctctcgaccagga
aggttcgggcaaaggaaatatccaacattaaactga
DBGET
integrated database retrieval system
