KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122565201
Entry
122565201         CDS       T08871                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpla03036]
    122565201 (kdm4b)
Enzymes [BR:cpla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122565201 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122565201 (kdm4b)
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122565201 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 DUF4537
Other DBs
NCBI-GeneID: 122565201
NCBI-ProteinID: XP_043576852
LinkDB
Position
31:7304192..7783503
AA seq 1100 aa
MATENPGPPNPNCKIMTFRPTLEEFKDFGKYIVYIESQGAHRAGLAKVIPPKEWKPRKSY
DDIDDMTIPAPIQQVVTGQSGLFTQYNIQKKSMTVGEYRKLANSEKYCTPRHMDFDDLER
KYWKNLTFVSPIYGADISGSLYDNNIEEWNIGNLNTLLDMVEQECGIVIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYSIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVQFLQPDRYELWKNGKDIVTIDHNKPTALSSPEMEDWLE
RKASLKAKSIRRSHRRRTQTRRQKTDDQRILSEPAAEETCGKDVTEDDTKIKDEHKRTMD
AEEHSKPSKVTILELDQGDFTDDLFNHHFSANGKPLKTYSRSSKSKNEKKKKRVETDTVA
AISADGIEPTEPSKAELSQADSPSASASMLSDSFTAEDEFKPRAKATMMYVLPKSKKVVF
DKEHMSCQQAFEQFATRNKLPMWKEAEMNNDGITMEEEASDHESVDVSFETTEVQVPPDY
PKLKKEITKSRRHPFSKPPARSPLSVVKLEASSDEEIPFFSGEEDQSEPEAWKSPLTHLW
QSRSYNFLAERKFNASAALTEPYCAICTLFYPYYQPERDTVQDTFTADGNPWKMTAKVGQ
KTKPIIPEMCFTSGGENTEPLPTNSYIGDDGTSLLISCSKCCLQVHASCYGIRPDLVKHG
WTCSRCTANAWTADCCLCNLRGGALKSTTDKRWVHVICAIAVPEVKFLNVLERNPVDVSG
IPEQRQKLKCVYCRKKVKSYSGACIQCSYEHCSTSFHVTCAHAAGVVMEPDDWPYVVSII
CFKHKTTNQNQNQDHWLISVGQMVIAKNRNGLYYKCKVIGTSAQTFYEINFEDGSYSDNV
YPENVVSRDCVQHGSPAEGEVIQVRWTDSLVYSAKFVGSQVRYNYQVEFEGGSQLTLKRE
DLYTLDEELPKRVKARLSPLMGSQHEDYISGEEAKDAKKVQPSNSRLLEDYSQKDYTQNP
EYLTFMENLFHSPYQQGYIN
NT seq 3303 nt   +upstreamnt  +downstreamnt
atggcaacggaaaatccaggtcctcctaatccaaactgcaagatcatgacgttccgtcca
acgctggaagagttcaaagatttcgggaagtatattgtgtacattgaatcccagggagcc
catagagcaggactggcgaaggttattccccccaaggagtggaaaccaagaaagtcctat
gacgatattgatgatatgaccatcccagctccaattcaacaggtagtgactggccaatct
gggcttttcacacagtacaacattcagaagaaatccatgactgttggagagtacaggaag
ctggccaacagtgaaaaatactgtacgccacggcatatggattttgatgaccttgagcgc
aaatactggaagaatctgacgtttgtctctcccatctatggagctgatatcagtggttct
ctgtatgataataatattgaagagtggaacattggaaacctcaatacgttactggatatg
gtggaacaggagtgtggaattgtgattgaaggtgtgaatactccatacttgtactttgga
atgtggaaaaccacatttgcctggcacactgaagatatggacctctacagcatcaactac
ttgcactttggggagcccaaatcctggtatgcaatacctccagaacatggtaagaggctg
gagcgactggcaaaaggcttcttcccaggcagttctcaaggatgtgatgcatttcttcgg
cacaaaatgactcttatatcgccttccatactgaagaagtacagcattccctttgatagg
attacgcaggaggctggagagttcatgatcacgtttccttatggctatcatgctggtttc
aaccatggattcaattgtgcagaatctactaacttcgccacgcttcgctggattgattat
ggcaaaatggctacccagtgtacttgtagaaaggatatggtgaagatatcaatggatgtg
tttgtgcagttccttcagcctgatcgctatgagctatggaaaaacggcaaagacattgtc
actattgatcacaacaagccaaccgctctatcaagtcctgaaatggaggactggctggaa
cggaaagcgtcattaaaggcaaaaagtattagaagatcccatcggcgaagaacacagacc
aggagacagaaaactgatgatcaaagaatactgagtgaaccagcagctgaagaaacttgt
ggaaaagatgtgacagaagatgacaccaaaatcaaggatgaacacaaaagaacaatggac
gcagaagaacacagcaaacccagcaaggttacaatcttggagctagaccaaggtgacttc
acagatgatttatttaatcaccatttttcagctaatggcaagccactgaaaacatattca
cgttcctcaaaatccaaaaatgaaaagaaaaagaaacgtgtggaaacagacaccgtagca
gctatctcagctgatggcattgaacctactgaaccatccaaagcagaattatcccaggca
gattctccatctgcatcagcaagtatgctttcagatagttttactgctgaagatgaattt
aaacccagagctaaagctaccatgatgtacgtgctacctaaatcaaagaaggtggtgttc
gacaaggagcacatgtcctgtcagcaggcttttgagcagtttgccaccaggaacaaacta
ccaatgtggaaggaagcagaaatgaacaatgatggaataacaatggaggaggaggcgagt
gaccatgaaagcgtggatgtcagttttgaaactactgaagtgcaggtgccaccagattat
ccaaagttgaagaaggagatcacaaagagtcggcgccatcccttcagcaagcccccagct
cgatctccattgtccgttgtcaaactggaagcatccagcgatgaagaaataccctttttc
tccggtgaagaagatcagagtgaaccagaggcctggaagtcaccactcacccacttgtgg
caaagtcggtcatacaattttttagccgaaaggaaatttaatgcatctgctgcattaact
gagccctactgtgcaatctgtacactcttttatccctactaccagcctgaaagagatact
gtacaggacactttcacagctgatggaaatccctggaaaatgactgccaaggttgggcaa
aagacaaagccaatcatcccagaaatgtgtttcacatcaggtggagaaaacacagagcct
ttaccaacaaattcatatattggtgatgatgggaccagcttgctcatttcctgttcaaaa
tgctgtcttcaggtgcatgctagttgttatggcattcgaccagatttggtcaaacatggt
tggacttgctcacgatgtacagccaatgcctggacagcggattgctgtttgtgcaatttg
agaggtggggcactgaaaagcaccacggataaaaggtgggtccatgtcatctgcgcaata
gcagtccctgaggtgaagtttttgaacgtgttggaacggaatccagttgatgtctctggg
attccagagcagagacaaaagttgaaatgtgtgtactgcagaaaaaaggtgaagagctac
tcaggggcctgtatccagtgttcatatgaacattgttctacatcatttcatgtgacatgt
gctcatgctgcaggggttgtaatggaaccagatgactggccgtatgttgtgtctatcatc
tgcttcaagcacaaaacaaccaatcagaatcaaaaccaagatcattggctcatctcagta
ggtcagatggtcatcgcaaaaaatcgaaatggactttactacaaatgcaaagtgattggg
acttctgcacagaccttttatgaaatcaattttgaagatggatcttacagtgacaatgtg
tacccagaaaatgttgttagcagggactgtgtacagcatggttcacccgctgagggtgag
gtcatccaggtgcgatggactgacagtctggtgtacagtgcgaagtttgttggttcccag
gtcaggtacaactaccaggtggagtttgagggaggctctcagctgaccttgaaaagagaa
gacctttacacactggatgaggagctacccaagcgtgtgaaagcacggctgtcaccactg
atgggctcccagcatgaagattacatctcaggagaggaagctaaggatgcgaagaaggtt
cagccatctaactccaggttgttagaagactacagccagaaagattacactcagaatcct
gaataccttacatttatggaaaacctctttcattcaccttaccagcagggatatattaat
tag

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