Chiloscyllium plagiosum (whitespotted bambooshark): 122565247
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Entry
122565247 CDS
T08871
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla02010
ABC transporters
cpla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122565247
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122565247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122565247
Transporters [BR:
cpla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122565247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
122565247
NCBI-ProteinID:
XP_043576951
LinkDB
All DBs
Position
31:14632980..14806731
Genome browser
AA seq
2269 aa
AA seq
DB search
MSFWIQLGLLLWKNFTYRKRQIVQLVIEILWPLFLFFILVSVRQSHPSFEQNECHFPNHA
LPSAGTLPWIQGIICNIKNPCFQYATPGETPGNVGNFNQSILSRLLSDAQKVLLHANQDH
ILQSFNQLLNALKKLNENSLPLSGLPIKEYLQKNQTLSEFFLNNASLPTEVVNDLMAAKI
NLNQIPLAGSRENFKEIVCNKSHLSSFLATKNMKAFNRLHKNLCALPEGTLQNATTIFLS
EVNFSKLLAERVTFSAGNALDASNALNSFILRVGSLVQQFSNMTSFSEFWDAVQWLNSPN
ATRSPTMMFQTISKIVCGHLDGGGLQIPFMNWYEDDNYKAFFGRNSTDEKIITFNNLTSP
HCNDLLKTLESYSSIMWKSIKPLFVGKILYSPDTPATLKIMKEVNRTFEDLSLLQEVRGA
WNEAGPQIWKFMESSQEIRLLQKMLRNPAIATLIDLQLNSTSWTAESIANFLTSQTEGSE
NSNYTWKQAYEELDQVVNSFSQVFECISLNKLEAVPTEEKLVVRALQLLEERQFWAGVVF
LVDEPTGSEIHTLQPHIKYKIRMDIDYVAPTHKIKDRFWDPGPEALTIRDLQYIWGGFVY
IQDLVEQAIIRVQTNEHKKTGLYLQQMPYPCYVDDGFLRVLNRSLPLFMILSWIYSVAMI
VKRLVHEKEARLKETMKMMGLSNGILWVSWFISSFIPFLISAAFLTLILKKGEILPYSSP
SVVFVFLATFAVSTIMLCFLISTFFSGANLAAACGGIIYFSLYLPFVLCVAWRNSVTFPL
QIFVSLLSPVAFGFGCEYFSLYEEQGIGIQWFNLVSSPVEGDAYNFTTSIILMVFDALIY
GLAAWYIEAVFPGQYGVPKPWYFPVLRSYWCGEFYCKEDLFEFPGNSSTNKVHLEQEPTH
LKLGVSIQNLVKVYGNGKKVAINGLSVNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGRNIFTEMDTIRKSLGMCPQHNVLFDILTVEEHIWFYGRLKGLTEEEVNEEIKL
MIDDVDLVHKRREQTKNLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYSRRGIWELL
LKYRKGRTIILSTHYMDEADLLGDRIAIISHGKLCCCGSSLFLKNHLGTGYYLTLVKKEN
DKTTPASSSSTTIGLRKEDSDSERSYDTGLGSEQCSETGALDVSTVLALVQKYVSSARLV
EDFGHEMTFILPYVGAKDGAFVELFQELDSHLCELGISSYGISDTSLEEIFLKVAENTGV
DSDIADGNVPIKRVRCSRSSEHTLQPVSEEGDFELPDTEPVKRKGRRKEPKETDFMQCME
GRGSFQLRGWQLTRQQFHSLFIKRFLYARRSRRGLFAQIVLPALFVFIALFFSMIVPPFG
KYPPLELSPWMYGEQYTFISDDFPEDPITHDLISALLSDPGFGTKCMESGKNENMQCQDG
GTDWITPQVSESILKILYSGNWTMQNPSPACVCSSKETQRMLPLCGEGAGGLPPPQLQRN
TGDILQNLTGRNVSDYLVKTYPQIISKSLKTKKWVNEFRYGGFSLGARSSQVLPSLSEVN
ISTIEIRSRLNVTKGSSMDRLLGNIGNFIESLNTNNNVKVWFNNKGWHAMVSFVNVMSNA
VLRANLPPGKDPTRFGITAFNHPLNLTKEQFTEVALIGTSVDLLVSICVIFAMSFVPASF
VLFLIEERVSKAKHLQFVSGVKPGIYWLANFAWDMCNYAVSATLVVIIFICFQQRSYVSA
PNLPALILLLFLYGWSITPLMYPASFLFSIPSSAYVALTCVNLFIGINGSVATFVLELFH
DKKLDDVNQILKKVFLIFPHFCLGRGMIDMVKNQAMADAYERIGEKVFTSPLSWDLVGKN
LFAMAVQGIVFFLFTILLQYRFFFKMRSLSLKLPPLETEDEDVARERQRVMYGGSDGDIL
VIKDLTKVYRRKKKPAVDRLCVGIPPGECFGLLGINGAGKTSTFKMLTGDTEVSSGEAFL
DGYSILSNIQDVHQNMGYCPQFDAINKLLTGREHVEFYSRLRGIPEHEVAKVTEWAVKKL
GLSRYADRPSGTYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWNCILSVIR
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKSRFGDGYTIILRMDCTTLDL
SNVEEFMVSTFPGCVLKEKHHSMLQYQIPTGCCSLAKIFSALMTNKEKLKIEDYSVSQTT
LDQVFVNFAKDQSEDYCLKDIFTHGPQHKDTMKRITNFLADENMRESSV
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctggatacagcttgggctcctcctttggaagaatttcacctatcggaaaaga
cagattgttcagctggttattgagattctgtggcctctcttcctcttctttatattggtc
tccgtgcgtcagtcccatccatcatttgagcagaatgaatgtcactttccaaaccatgca
ttaccatcagcagggacactgccatggatacaggggatcatctgtaatattaaaaatcct
tgcttccagtatgctaccccaggagaaactccaggaaatgtggggaatttcaatcaatcc
attctttcacgtttgctatctgatgcacagaaggtgctacttcatgctaatcaggaccac
atcctgcaaagcttcaatcaactcctgaacgctttgaaaaagctcaatgaaaacagcctt
ccattatctggtttaccaatcaaagaatacctgcagaagaatcagaccctatctgagttt
ttcctgaacaatgcatcacttcccacagaggtggtcaacgatttgatggcagcaaaaata
aatctcaatcagataccccttgctggatcaagggaaaattttaaagagattgtttgcaac
aagtctcatctctccagtttcttggctacaaagaatatgaaggcattcaaccgtttgcac
aagaatttgtgtgccttaccagagggaacactgcaaaacgcaacaactattttcctttct
gaagtcaacttctccaaactcttggcggagagggttacatttagtgctggaaatgcactt
gatgcatctaatgctcttaacagttttatactcagagtgggatctcttgtgcagcagttt
tccaatatgaccagcttttctgaattctgggatgcagttcagtggttaaatagtccaaac
gctactagatcaccaaccatgatgtttcaaacaatatcgaagattgtttgtgggcatttg
gatggaggtgggctgcaaatacctttcatgaactggtatgaagatgataactacaaggcc
ttctttggcaggaatagcacagatgagaaaattatcacttttaacaatttaacatcacct
cactgtaatgatctacttaagactcttgaatcttactcttcgatcatgtggaaaagtatc
aagccactatttgtagggaagatactgtacagtccagatactccagctacattgaagata
atgaaagaggtgaacagaacgtttgaggatctaagcttgttacaagaggtgcgaggagcc
tggaatgaagctggaccccagatctggaagtttatggaaagtagtcaggaaatccgtctc
ctgcaaaaaatgctaaggaaccctgctatcgctacccttattgatctacaacttaattct
acctcttggactgcagaaagtattgccaactttctgacgagccaaactgaagggagtgag
aattccaattacacctggaaacaagcttatgaagaattagatcaagtggtcaactctttc
tcccaggtctttgagtgcatatctctgaataaactagaagctgttccgaccgaagagaag
ttagtggtccgtgcgttgcagcttctggaggagagacagttctgggctggagttgtgttt
ttggttgatgagccaacaggtagtgagattcacactcttcagccccacatcaaatacaag
attaggatggacattgattatgtagctccaacccacaaaatcaaggacaggttttgggac
ccaggacctgaagccctcacaattcgggaccttcagtacatctggggaggatttgtttac
atccaggatttggtggaacaggcaattattcgagtacagaccaatgaacacaagaagact
ggactttatttacaacagatgccatatccatgctatgtggatgatggtttcttgcgagtt
ttgaaccgttcgttgcccctcttcatgatcctgtcttggatttactcagtagcgatgata
gtcaagaggctggttcatgagaaggaggcacggctaaaggagacaatgaagatgatggga
ctgtctaatggaattttgtgggtcagctggttcatcagtagctttatccctttcctcatc
agtgctgcttttctcacattaatcctgaagaaaggagagattctcccgtacagcagtccc
tctgttgtatttgtattccttgcaacctttgctgtttccaccatcatgctgtgtttcctg
atcagcacgttcttctctggtgcaaacctagcagccgcttgtggcggaatcatttacttc
tccctctaccttccatttgtcctgtgtgtggcatggagaaactcggtaactttcccactc
caaatatttgtgagtctgttatctccagttgcgtttggttttggatgtgaatatttctct
ctctacgaggagcaaggaattggtatccagtggtttaacctggtctccagccctgtagag
ggcgatgcatacaattttacaacttcaatcatcctcatggtgtttgatgctctcatatat
ggccttgcagcatggtatattgaagcagtgtttccaggtcaatatggagttcccaaaccc
tggtatttccccgtcctcaggagttactggtgtggagagttctattgtaaagaggatttg
tttgaattccctggtaacagcagcactaataaagtccatctggagcaggaaccaactcac
ctcaaattgggggtgtccatccagaacctggtgaaggtttatggaaatgggaagaaggtg
gctattaatggacttagcgttaatttctatgagggccaaatcacctcatttttggggcat
aatggagctggaaaaacgactaccatgtccatcctgactggattgttcccacccacctct
gggacagcatacattctgggcagaaatatcttcacagagatggatacaatcagaaagtca
ctagggatgtgtccacagcacaatgtactttttgacatactgactgtggaggagcacatc
tggttttatggaaggctgaaggggctgactgaggaggaggtaaatgaagaaattaagttg
atgattgatgatgtggatttggtgcacaaacgtagagaacaaacaaaaaatctctcaggt
ggcatgcaacgaaagctttcagtcgccattgcatttgttggcggatcaaaggttgttatt
ttagatgaaccaactgctggcgttgacccttactcccgccgaggaatatgggagctcttg
cttaaatacagaaaaggccgcactataatattatcaacccattacatggatgaggcggac
ctcctcggggacagaattgccatcatctcccatggaaagctctgctgctgtggctcttca
ctgttccttaaaaaccatttaggaactggctattacctgactttagtgaaaaaagagaat
gacaagacaacgccagccagctccagcagcaccactattggtctgaggaaggaggacagt
gattccgagaggagctatgatactgggcttggcagtgaacagtgcagtgaaactggcgca
ttggatgtatcaaccgtcctagcactagtccagaaatatgtatccagtgcacgtctggtg
gaggattttgggcatgaaatgacttttattttaccctatgttggtgcaaaagatggtgct
tttgtagaactcttccaggaattggacagccatctctgtgaacttggaatttccagctat
ggcatctcagacactagcctggaagagatttttcttaaagtggctgaaaacactggagtg
gacagtgatattgcagatggaaatgttcccattaaaagagtcagatgttcacgatccagt
gagcacacactgcagccagtcagtgaggaaggggattttgagctacctgacacggaacct
gtaaaaaggaaaggtcgaaggaaagaacccaaggagactgactttatgcaatgtatggaa
ggcagaggttcattccagttacgtggctggcagctcacccgacaacagttccattccttg
ttcatcaagcgcttcctgtatgctcgccgaagtcgcagaggactttttgctcagattgtg
ctgcctgcattgtttgtgtttattgctctgttcttcagtatgattgtgcctccatttggg
aaatatccaccattagaactgagtccctggatgtatggagaacagtacactttcatcagt
gatgacttcccagaggatccaatcacacatgatctgatcagtgcactcctcagtgaccct
ggatttggcaccaaatgtatggagagtggaaagaatgagaatatgcagtgccaagatggt
ggaactgattggataactccccaagtttcagaatccatcctgaagatcttgtacagtggt
aactggactatgcaaaacccatcccctgcgtgtgtgtgcagctcaaaggagacccagagg
atgttgcctttatgtggagaaggagcaggagggctcccaccccctcagttgcagcgaaat
actggggacattcttcagaatctaactggcaggaatgtatctgactacctcgtgaaaacc
tacccccagatcattagtaaaagtctgaaaactaagaagtgggtgaacgagttcaggtat
ggaggattctcattgggagcacgaagttcccaggttttaccttccttgagtgaagttaat
atctccactattgagatcaggtcacgattgaatgtcacaaagggtagttccatggaccga
ctgctgggaaacatcggaaactttatcgagagcttgaacacaaataataatgtgaaagtc
tggttcaacaacaaaggctggcatgccatggtgagttttgtgaacgttatgagcaatgca
gtgctgagagcaaatcttccaccagggaaagatcccacaaggtttgggattactgcattc
aaccacccactgaatctgaccaaagaacagttcactgaagtcgcgctgataggtacctct
gttgatttgctcgtctccatttgtgtcatctttgccatgtcctttgtgccagccagcttt
gttctcttcctcattgaagaacgtgtcagcaaagccaagcaccttcaatttgttagtggt
gtgaaacctggcatttattggcttgcaaactttgcatgggatatgtgtaattacgcggtg
tcagcaacactggtagtgatcatcttcatctgctttcaacaaagatcttacgtatctgcc
cccaatttgccagcactgatcctcctgctgttcctttatggctggtccatcactcccctc
atgtatccagcatcctttttgttcagtatccccagttccgcctatgtggcactaacctgt
gtaaatctattcatcggtatcaatggcagtgtggccacctttgtcctagagctcttccat
gacaagaaattggatgatgtcaatcaaatcctgaaaaaggttttcctcattttcccacat
ttctgcctgggccgaggcatgatcgacatggtgaagaatcaagctatggcagatgcatat
gagaggattggggagaaggtgttcacatctccactctcctgggacctggtgggaaagaac
ctgtttgccatggctgtccagggaatcgtcttctttctgttcacaattctactgcagtac
agattcttcttcaaaatgagatctctgtctttaaaacttccaccattggaaacagaggat
gaggatgtagccagagagaggcaaagggttatgtatggtggaagtgatggtgatattcta
gtcatcaaggatctcaccaaagtttacagaaggaaaaagaaaccagctgtggaccgactg
tgtgtgggaattcctcctggagagtgctttggactgctggggatcaatggagctgggaaa
acatccacgtttaagatgcttacaggtgacactgaggtcagcagtggtgaggccttcctt
gatggatatagcattctgtctaacatccaggacgtgcatcagaacatgggatactgccct
cagtttgatgccatcaacaaactgctgacagggcgggaacatgttgaattctactcacga
ctacgtggcattcctgagcacgaggttgctaaggtcactgaatgggctgtgaagaaacta
ggactctcacgctatgcagacagaccttctgggacgtatagcggtggaaacaaacggaaa
ttgtcgactgccatcgcactgattggatgcccaccagtcatctttctggatgaacctacg
acaggaatggatcccaaggccaggcggttcctctggaattgcatcctgagtgtgatcaga
gaagggagatcagtggtactcacctcacacagcatggaggaatgtgaggctctgtgcaca
aggatggccatcatggtgaatggacgattccgttgccttggcagtgtacagcacttgaag
agcaggtttggagacggttacaccatcatcctgaggatggattgtactacgctggacttg
tctaatgttgaagaattcatggtatccacgttcccaggctgtgtgttgaaggaaaagcac
cacagcatgttgcaatatcagataccaacagggtgctgctccctggccaaaatcttcagc
gccctcatgaccaacaaagaaaaactgaagattgaagactattcagtgtctcaaactaca
ttagatcaagtatttgtcaattttgccaaggaccaaagtgaagactactgtttgaaggac
attttcacacacggaccccaacacaaggacactatgaagcgcatcacaaattttttagca
gacgagaacatgagagagagttcagtatga
DBGET
integrated database retrieval system
