Chiloscyllium plagiosum (whitespotted bambooshark): 122565290
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Entry
122565290 CDS
T08871
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122565290 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122565290 (slc1a6)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
122565290 (slc1a6)
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
122565290
NCBI-ProteinID:
XP_043577026
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Position
31:18508512..18605513
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AA seq
558 aa
AA seq
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MSERQTNVNSLFLNEESGKRSAADSRVQRLQKAVRSRAGRAKKSLSNISRQSVLSFLKKN
AFVLLTIFAVILGIILGFTLRPYKLSYREIKYFSFPGELLMRMLQMLVLPLIVSSLVSGM
AALDSKASGKMGIRAVVFYMVTTIIAVFIGIVMVMIIHPGKGSKVDLHREGKIEKVQAAD
AFMDLIRNMFPPNLVEACFKQYKTNYGTRKILRPTSSSINFTTTTEPSMIENITEAFKNL
EELMFVEEVIPVAGSSNAVNALGLVVFSIAFGLVIGNMKQQGRALKEFFDCLNEAIMRLV
AIIIWYAPIGILFLIAGKIMEMKDLTVMGGQLGMYTVTVIIGLLIHALVVLPLLYFIVTH
KNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKHVTRFVLPVGATINMDGT
ALYEALAAIFIAQVNNYDLNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPT
EDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELHRTDAEVGNSVIEENEKPYQ
LICQEHENQKHLDSETMM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcggcagaccaacgtgaacagcctgttcctgaacgaggagtcgggaaagcgg
agcgccgcggacagccgagtgcagcgcttacagaaggcggtgcgcagccgagctggaaga
gcaaagaagagcttgagcaacatcagccgccaaagtgtgctcagcttcctcaagaaaaat
gcctttgtccttttaactatctttgcggtcattctgggtataattctagggtttaccctc
cgtccctacaagctgtcctatcgtgagattaagtatttctctttcccgggtgagttgctg
atgagaatgctgcagatgctggtgctcccactcattgtttccagtctggtttcaggaatg
gcagctctggacagcaaagcatctggtaaaatgggaatccgagctgttgttttctacatg
gtaaccactatcatcgctgtgtttattggaattgtcatggtaatgatcatccatcctggc
aaaggatcaaaagttgacctacatcgggaaggaaagattgagaaggtgcaggctgcggat
gctttcatggacctaatcaggaatatgttcccacccaatctagttgaggcttgtttcaaa
cagtacaaaacaaattatggcacacgaaaaatcttgagaccgacatcatcatctatcaat
tttacaaccaccactgaaccatccatgatagaaaacataactgaagcattcaaaaattta
gaggagttgatgtttgttgaggaggttattccagttgctggttcttccaatgcagtgaat
gcattgggcctcgttgtcttctccattgctttcggtttggtaatcggcaatatgaaacag
caaggccgggcactgaaggagttttttgactgccttaatgaagccatcatgagactggtt
gcaattataatctggtatgcccctataggtatcctcttcctgattgcaggcaaaatcatg
gaaatgaaagaccttactgtgatgggtggacaactgggaatgtatactgtgacagtgata
attgggctgctcattcacgcactcgttgtcctgccacttctttatttcatagtcacccac
aagaatccttgggtttttattggcgggttgttgcaagctttgattactgcccttggcact
tcatccagctcagcaactctcccaatcaccttcaagtgtttggaagaaaataacggtgta
gacaagcatgttactcgctttgtccttcctgttggagctactattaatatggacggcaca
gcactttatgaagccctggctgccatttttattgcacaagtcaacaattatgatctaaac
ttcggacaaatcataactatcagtatcactgcaacagcagccagcattggagctgcagga
ataccacaggctggccttgttaccatggtgatagtgttgacatccgttggacttcccacg
gaggacatcaccctgatcatcgcggtggactggttcctggatcgtttgcgaaccaccaca
aatgtactcggcgattcactgggagcaggcattgtggagcacctgtcaaggcatgaactg
catagaacagatgcagaagttggaaattctgtcattgaagaaaatgagaaaccttatcag
ctcatctgccaagagcatgaaaaccagaaacatttggatagcgagaccatgatgtga
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