Chiloscyllium plagiosum (whitespotted bambooshark): 122565336
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Entry
122565336 CDS
T08871
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122565336
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpla03310
]
122565336
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122565336
Nuclear receptors [BR:
cpla03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122565336
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122565336
NCBI-ProteinID:
XP_043577137
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Position
31:complement(25659969..25736051)
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AA seq
469 aa
AA seq
DB search
MKNPSHSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDR
TNRNRCQHCRLQKCLTLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQHQEQLASKEDSEGL
ARVYTNSVSSGLGDLDDISSTFSDGLLFDFPLTPDGGNSFYNFDLSTSAEPSPDQSAIDM
NDIKHIKQESIYEIMLEPSLFSYPSPESGQLASEISMAEIDRIAQNVVESHSETCQYTTE
ELKQLAWQPYTQEEIRNFQNKSCEAMWQQCAIQVTNAIQYVVEFAKRISGFMELCQNDQI
ILLKAGCLEVLLVRMCRAYNPLNNTIFFEGKYGDTQIFKSLGCDDLINIVFDLAKSLCCL
HLTEEEIALFTAGILLSPDRPWLTEARKVKKLQDKIFEALQHVIHKNQLDDDKLSKLISK
LSMVKSVCNLHVDKLQLFKLLHPQTVHNFPPLYKEVFSTEMQYPDSSNS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatccatcccactcccaaattgaagtgataccgtgtaaaatctgtggagataaa
tcttcaggaatccactatggagtcatcacttgtgaaggatgtaaaggtttcttcaggaga
agccaacagaataatgctgcatactcctgtcctcgtcagaggaattgcttgattgatcgg
accaatcggaatcgttgccagcattgccgactgcagaagtgtcttactcttggaatgtca
cgtgatgctgtgaagtttggtcgcatgtccaaaaagcaacgtgacagcctctatgcagag
gtacaaaaacatcaacaacaccaggagcagttggcatcaaaggaagattctgagggacta
gcacgagtctacacaaacagtgtcagtagtggactgggagatctggatgacattagcagc
acattctcagacgggctcctgtttgactttccactgacccctgatggaggaaacagtttt
tataactttgatctttcaacctctgctgaaccatctccagaccagtctgctattgacatg
aatgacattaaacacattaaacaagagtccatatatgaaatcatgctggaacccagtttg
ttctcctatccttcaccagagagtggtcaactagcctcagaaatttcaatggcagagata
gatcggatagcgcagaatgtggtggaatcacattcagagacttgccagtacacaactgaa
gagttgaagcagcttgcctggcagccatatacacaagaagaaatcaggaactttcaaaat
aagtcctgtgaggccatgtggcagcagtgtgcaatccaggtgacaaatgcaatccagtac
gtagtggaatttgccaagcgaatcagtggattcatggaactgtgtcagaatgatcagatt
atactccttaaagcaggttgcctagaagtcttactggttcgaatgtgccgagcatataac
cctttgaacaatacaatattttttgaaggaaagtatggagacacacagatcttcaaatca
ttgggttgtgatgatttgatcaacattgtctttgacttggcaaaaagcttgtgctgcctg
catttgacggaggaagagattgcattattcacagctggcatcttattatcaccagatcga
ccatggttgacagaagctagaaaagtcaagaagctacaggacaagatttttgaggcattg
cagcatgtcattcacaaaaatcaactggatgatgacaagttatcaaagctgatctccaaa
ttgtccatggtgaagtccgtatgcaacctccacgtggataagctacagctatttaagttg
ctacatccacaaacagtgcacaactttcctccactctacaaggaagtattcagcacagag
atgcaatatccagactcctccaacagctaa
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