KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122565352
Entry
122565352         CDS       T08871                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03020  RNA polymerase
cpla03420  Nucleotide excision repair
cpla04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122565352
  09124 Replication and repair
   03420 Nucleotide excision repair
    122565352
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    122565352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122565352
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122565352
Transcription machinery [BR:cpla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122565352
  RNA polymerase III system
   RNA polymerase III
     122565352
  RNA polymerase I system
   RNA polymerase I
     122565352
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122565352
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 122565352
NCBI-ProteinID: XP_043577166
LinkDB
Position
31:complement(26770425..26782473)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRGQFGDKPSEGRPRRSDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgatgaagaggagacttatcgcttgtggaagatccgcaaaaccatcatgcagctt
tgccatgatcgtggatatttggtgacacaagatgaattggatcagacactggaagaattt
aggggtcaatttggagataagccaagtgaagggcggccacgacgttcagaccttactgtg
cttgttgctcacaatgatgatcccactgatcagatgttcgttttctttccagaggagcca
aaagttgggatcaaaaccattaaaatgtattgtcaacgcatgcaggaagaaaatattacc
agagccatcattgtggtacaacaagggatgaccccatcagcaaagcagtctcttgttgac
atggctcctaagtatatccttgagcaattccttcaacaggaactcctaattaacattaca
gaacacgagcttgttccagagcacatagtcatgaccaaggaggaagttacagagctactg
gcacgatataagttaaaggagagccaattgccaagaatacaagcaggtgatccagtggca
cgatactttggattgaaaagaggacaggtggttaagattataagacctagtgagactgca
ggaagatacattacctacagacttgtgcagtga

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