Chiloscyllium plagiosum (whitespotted bambooshark): 122565355
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Entry
122565355 CDS
T08871
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122565355
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122565355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122565355
NCBI-ProteinID:
XP_043577174
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All DBs
Position
31:complement(26828823..26991688)
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AA seq
1324 aa
AA seq
DB search
MLKVRCVMDGQNYQHIHQTDTAMYALPNIQTTFCSQATENQMLNPNIWNHIPYSYPTYPA
TVPLNDPRQIFRTPNQPFSDSLPINGQNYEESSLESIFQLRNGEHIQDFNCMDDNSLFSS
PDPSLSDIADTEDFNLDVLNPSIWDSRLDSSLEVCIERLAHPFPLNLPFSNHLQINNGPT
HSFQTPPQPEEEEDADDEETEELGHAETYAEYVPSKSKIGNSHPDKVVETSTLSSVPPPN
IRYTLCLPEATISNGSLSALQLEAIIYACQQHEILLENNHRAGFLIGDGAGVGKGRTVAG
IIYENYIKGRKKSLWFSVSNDLKYDAERDLRDIDASNIPVHALNKIKYGDTATSEGVLFA
TYSALIGESQAGGQHRTRLKQILDWCGEHFDGVIVFDECHKAKNVCVNGSTKSTKTGLAV
LELQNRLPFARVVYASATGASEPKNMAYMCRLGIWGEGTPFRQFEDFLHAIEKRGVGAME
IVAMDMKVSGMYIARQLSFAGVTFRIEEIPLDQSFQLVYNKAAVLWAEAMNVFQQSADLI
GLESRKSLWGQFWSAHQRFFKYLCIAAKVKRLVEIGKLELQKGKCIVIGLQSTGEARTRE
VLDENDGHLNQFVSAAEGVFKSLIQKHFPSIKRKKEKGTGMKRKRKPHVRNVKHLKTIPE
YVCLLKSSDDSSCDSDVDTDSDPNSSPSSAMEISEENDLIALDTPNDFRSTEKATLDYVE
KMKWDLLVKVELLGKELPLNTLDELIDLFGGPEQVAEMTGRKGRVVRKPDGSVCYESRAE
QNLSIDHVNLKEKERFMNGDKFVAIISEAASSGISLQADKRIKNQRRRVHMTLELPWSAD
RAVQQFGRTHRSNQVSAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDL
SKYNFDNKYGTKALDKIIKTILGQIENKVQPPKDYIGGPSCFIEDMRQGLMAVGIFCKEN
RYGCINVEKDCSITKFLNRILGLEVHKQNALFQYFTDTFDYLIEKDKKDGKYDMGILDLA
PGVEEIYEESQQIFLTPGHPQDGQVVLYNISVDRGMPWEEAYQKSLTLTGPNDGFYLSHR
LRGNEPFALLAEQITVKHYVLYKPNIGKQIQPESFDNLRKKYKRVEPEEAKEIWQNLYSF
SFRKCSHAAWNGKCKIVQQGKECVQGMRLRHYYMLCGALLRVWNKVGNIMSDVTSSSHLQ
IVRLKTKDQRKQVGIKIPEACVYAVVNELKKMDMAVKKKQEESRQLLANQVLQICQSEAQ
SSLSVEQAFTNNTQILTDTFDPVQVLQELLGHDYDAFGEQEQMLNQDRQSVIQYGQPSHL
WEAG
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaagtacgttgtgtcatggacggacagaattaccagcacatccatcaaactgat
actgcaatgtatgctctgccaaatatccaaaccacattctgctctcaagcaacagagaat
cagatgctgaatcccaatatatggaaccatattccatactcgtatccaacataccctgcc
acagtacctctaaatgatccccggcagatttttcgtacaccaaatcaaccattttcagat
agtttacccatcaatggtcaaaactatgaagagtcaagcttggaatcaatattccagctt
agaaatggagaacatatacaggatttcaattgtatggatgataattcccttttctcatca
cctgatccatcactatctgatattgctgatactgaggattttaatctggatgttcttaat
ccaagtatttgggattcaagactagattccagtttagaggtctgtattgaaaggcttgca
catccatttccactaaatctgccattttcaaatcatctacaaatcaataatgggccgact
cactcttttcagactccaccccaaccagaagaggaagaagatgctgatgatgaggagacg
gaagaattgggccacgcagaaacatatgcagaatatgtaccttccaaatctaaaattgga
aatagccatccagacaaagtagttgaaacaagtactttatcaagtgtgcctcctccgaat
atcagatacacactctgccttcctgaagctacaatttcaaatggctctttgtctgcacta
caactagaagcaatcatatatgcatgtcagcaacatgaaatcttgttggaaaataaccat
cgtgcagggttcctcattggtgatggagctggtgttggaaagggaagaactgtggctggt
attatttatgaaaattatataaagggcaggaaaaagtcattgtggtttagtgtctccaat
gacctgaaatatgatgctgaacgggatcttagagacattgatgcttcaaatattccagtg
catgctctcaacaagataaagtatggtgatacagctacttctgaaggtgtattgtttgca
acgtactctgcattgattggtgaaagtcaggctggtggtcaacacagaacaaggctaaaa
cagattctggattggtgtggggagcactttgatggtgttattgtatttgatgaatgtcac
aaagcaaaaaatgtctgtgtgaatggcagtaccaaatccaccaaaacaggcctggctgtc
ttagagctgcaaaacagattgccatttgcacgagttgtttatgcaagtgccacaggtgcc
tcggaaccaaaaaacatggcttacatgtgccgcttgggtatttggggagagggcacgccc
ttccgccagtttgaggattttcttcatgctattgagaaacgtggtgtgggtgctatggaa
attgttgccatggatatgaaagttagtggcatgtatattgcacggcaactgagctttgct
ggagtgacattcagaatagaagaaatacctctggatcaaagtttccaacttgtatacaac
aaagcagctgtgctgtgggctgaagcaatgaatgttttccaacaatcagcagacctaatt
ggtttggaatccagaaaatctctttgggggcagttttggtcagcacatcaacgcttcttc
aagtatctgtgtattgctgccaaagtcaaacgtttagtagaaataggcaagctagaatta
cagaagggcaagtgcattgttattggactgcaatccacaggtgaggctcggacacgagaa
gtacttgatgagaatgatggccaccttaaccaatttgtatctgctgcagaaggtgtcttt
aagtcactcattcagaagcactttccttcaataaagagaaagaaagaaaaaggaacaggg
atgaaaagaaaacgaaaaccacacgttcgcaatgtaaaacacttgaaaactataccagaa
tatgtatgtttgttgaaaagcagtgatgacagtagctgtgattcggacgttgatactgac
agtgacccgaactcgtcaccttcatctgccatggagatatctgaagagaatgatctcatt
gctttggatactccaaatgattttcgatcgacagagaaagcaacactagattatgtagag
aaaatgaaatgggatctgttagtaaaggttgaactactaggaaaagaactacctctgaat
acactggatgaactgattgacttgttcggtggtcctgagcaagtcgctgagatgactgga
agaaagggacgtgttgttcgcaaaccagatggctcagtttgttatgagtcaagagcagaa
caaaatttgtccatcgaccatgtgaatttaaaggaaaaggagcggttcatgaatggggat
aagtttgtagctattatctctgaagcagccagttcgggaatttcactgcaggctgataaa
agaataaaaaaccaacgaagaagagtgcacatgaccctagaattgccttggagtgcagat
cgcgcagttcaacaatttggtcgtactcatagatcaaaccaggtgtcagctccagaatat
atattcctcatttctgaacttgcaggcgaaagacgttttgcctccattgttgctaagcgt
ctggaaagtctgggtgctttgactcatggtgaccgaagagcaacagaatccagagacctc
agcaaatacaactttgataacaagtatggaactaaagcactggataagataattaaaacc
atcttgggtcaaattgaaaacaaagtacaaccaccaaaagattacattggaggtcccagt
tgttttatagaagacatgagacagggactgatggctgttgggatattttgcaaagaaaat
cgttatggatgtatcaatgtggaaaaagactgcagcatcacaaaattcctgaatcgaatt
cttggactcgaggttcataaacaaaatgcactttttcagtattttacagacacatttgat
tatctcattgagaaggacaaaaaagatggaaaatatgacatgggaattctagatctagct
ccaggagtagaagagatatacgaggaaagtcagcagatcttccttacaccaggacatcca
caggatggacaagtcgttctttataatataagtgtggacagaggcatgccctgggaagag
gcttatcagaagtcactcactttaacgggacctaatgatggtttctacctttcgcaccgg
cttagaggaaatgagccttttgcacttttggctgagcaaatcactgtgaagcattatgtg
ttgtataaaccaaatattggcaaacaaatacaaccagaaagttttgataacttaaggaag
aaatacaaaagagttgaaccagaagaagccaaagaaatttggcaaaacctgtatagtttc
tcattcagaaaatgcagtcacgcagcttggaatgggaagtgtaaaatagtgcaacaaggg
aaggagtgtgtccaaggaatgcggttgcgccattactacatgttgtgcggggctcttcta
agggtttggaacaaagttggaaacattatgtctgatgttacaagttctagtcacttgcaa
attgtgcgtctaaaaaccaaggaccagagaaagcaagttggtataaagattcctgaagcc
tgtgtttatgctgttgttaatgagctgaagaaaatggacatggcagtaaagaagaagcag
gaggagagtcggcagctgctggcaaaccaagtactacaaatatgtcaaagtgaagcacag
agtagtttatctgtagaacaagcattcactaacaacactcagattttaacagatactttc
gaccctgttcaagttttacaagagctgttaggacatgattatgatgcgtttggagagcag
gagcaaatgctaaatcaagatcggcaaagtgttattcagtatggccaaccatcgcacctc
tgggaagctggctga
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