Chiloscyllium plagiosum (whitespotted bambooshark): 122565366
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Entry
122565366 CDS
T08871
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122565366 (rnf126)
04121 Ubiquitin system [BR:
cpla04121
]
122565366 (rnf126)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122565366 (rnf126)
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122565366 (rnf126)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122565366 (rnf126)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
PI4KB-PIK1_PIK
DUF8608
C1_2
DZR_2
Motif
Other DBs
NCBI-GeneID:
122565366
NCBI-ProteinID:
XP_043577205
LinkDB
All DBs
Position
31
Genome browser
AA seq
338 aa
AA seq
DB search
MFDTPEHPYCTSLWRLYVNMAEASSLSRYFCHRCSAEILPRLPEYTCPRCDSGFIEELLD
HVPRNTENGSSSTASTSDQTRQLFEGLDQHLLSLPQGSYGQFTFGILDDPFDPFSFGTNQ
TSEENRDSENRRDREHQSRPRYSSRQPRAPRFPSRRPTARNEGVPTLEGIIQQLVNGIIA
PTAVPNLGLGPWGVLHSNPMDYAWGANGLDTIITQVVNLLLNQFENTGPPPADKEKIKTL
PTVEITDEHVGSGVECPVCKEDYSIGESVRQLPCNHLFHNDCIIPWLEMHDTCPVCRKSL
SGQNTATNPPDLSRMNFSSSSSSSASSSPSNENSTNNS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacacgccggagcacccgtattgtacgtcactgtggcggctttacgtgaatatg
gcggaggcttcctcactctctcgctatttctgtcaccgctgttcggccgagattctcccc
aggctacctgaatatacatgtccaagatgtgattctggcttcatagaagaactactcgat
cacgtaccaagaaatactgaaaatggctccagttcaacagcttccacaagtgaccagact
cgacagttattcgagggtttggaccagcacttgctatccttaccacaaggtagttatgga
cagtttacattcggcattctggatgatccctttgaccccttttcctttggaactaaccag
acctcagaagagaatagagattctgagaataggagggatcgcgaacaccagtcacggcca
cgatatagctctaggcaacccagagcacccaggtttccatcacggcgtcctacagcacga
aatgaaggagtgccaactctagagggaattattcaacaattggttaatggaatcattgca
cctacagcagtgccaaacttgggattaggtccatggggtgtcttacattcaaatccaatg
gattatgcatggggagccaatggcttggacacaatcattacacaggtagttaatctgctt
ctgaaccagtttgaaaatactggcccacctccggcagacaaagagaaaatcaagacactt
cctacggtagaaataacagatgagcatgtaggttctggtgtagaatgccctgtgtgtaaa
gaagattacagcattggagaatctgttaggcaacttccatgcaaccatttattccataat
gattgtataataccttggctagaaatgcatgatacctgtccagtgtgtcggaaaagctta
agtgggcaaaacacagcaacgaatcctcctgatttatcaagaatgaacttctcctcttct
tcatcctcctctgcttcaagttcaccgagtaatgagaattcaacaaacaattcctga
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