Chiloscyllium plagiosum (whitespotted bambooshark): 122565380
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Entry
122565380 CDS
T08871
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04310
Wnt signaling pathway
cpla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122565380
04330 Notch signaling pathway
122565380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122565380
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
122565380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_like
Beta-prop_IP5PC_F
Beta-prop_TEP1_C
HALZ
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122565380
NCBI-ProteinID:
XP_043577230
LinkDB
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Position
31:31000700..31162907
Genome browser
AA seq
770 aa
AA seq
DB search
MFPHNRSSVPPSATPAASSQPLKFTFPETLDRIKEEFQFLQAQYHSLKMECEKLASEKTE
MQRHYVMYYEMSYGLNLEMHKQTEIAKRLNVICAQLLPYLSQEHQQQVIQTIERAKQVTM
GELNAAIGVRGLPILPPPHHFQPQQLSHHASPFPLALHPSGLQLPTMSSIGASSGLLALS
NALAAHPPFALKEDKNHQDPEHRRDRDQGSSSVHSSNGDKPRNSTEYPNHLKKKKTEERD
SVNDYDSDEDKSDDNLVVDVSNEEPSSPHSSPSQATHENGLDKLHVRRKNQVNSPSSLVS
TSSTPPPPLKSKDPAVNEKSSTPSLKSNIPSSRGDSATPGTSGTSQLCSASSKTGADPLA
LGLKTPLSVQGAFPVPFGMVHTAVNGGIAGANAYAGLHFASPQLNGGASASTFGRSSVAG
FEPHSHKRGPGLPGSLSAATAGKPAYSFHVGADRQMQPVAFPTDALTGPGIPRHARQINN
LPHGEVVCAVAVSNFTKHVYTGGKGCVKVWDISQPGNRSPVSQLDCLNRENYIRTCKLFP
DGRSLIVGGEANTISIWDLAAPSPRIKAELTSSAPACYALAISPDAKVCFSCCSDGSIFV
WDLHNETLIRQFQGHSDGVSCTDISNDGTKLWTGALDNTVRCWDLREGRQVHQHDFASQI
FALGCCPTGGWLAVGTESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN
LLNAWRVPYGASIFQSKESSSVLCCDISVDDQYVVTGSGDKKATVYEVIY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcacaaccgatcatcggttccaccatctgcaactccagcagcatcatcccag
cccttaaagttcaccttcccagaaacattggatcgaattaaggaagaattccagtttctg
caggcacagtaccacagccttaagatggaatgtgagaaactggccagtgaaaagacagag
atgcagcgacattatgtgatgtactatgaaatgtcatatggcctcaatcttgagatgcat
aaacaaactgaaattgcaaagagactgaatgtgatctgtgcccagctccttccttactta
tcacaggaacatcagcaacaggtaatccagaccatagaacgtgcaaagcaagtgaccatg
ggtgaattaaacgctgccatcggggtccgaggacttcccattctaccacccccacaccac
tttcaaccccaacagctatcccatcatgcatctcccttcccacttgccctccacccatca
ggtctgcaacttcccaccatgtcatccatcggtgcgagctcaggtcttctggcgctgtcc
aacgcacttgcagctcatcccccgtttgcgctgaaagaagacaagaatcatcaagatccg
gagcatcgacgagacagagaccaaggctcaagctctgtacattcatccaatggagacaaa
ccaaggaactccactgaataccccaaccatctaaagaagaagaagacagaggaacgagat
tcggtgaatgattatgacagtgatgaagacaagagtgatgataatcttgtggttgatgtt
tctaacgaggaaccttcatcacctcacagcagtccttctcaagcaacacatgaaaatgga
ttagacaaactgcatgtgaggaggaagaaccaagtgaatagtcccagctctttagtttcc
actagtagcactcctcctccaccactaaagagtaaagacccagctgtgaatgagaaatcc
agtacacctagtctgaagtcgaatataccatcatcgcggggggattctgcaaccccaggc
acgagtgggacatcacaactctgctcagcctcgagcaaaactggggctgatcctttagca
ttggggttaaaaacacctctgtctgtacagggtgctttccctgttccattcggaatggtc
cacactgcagtcaatggggggattgctggtgccaatgcatacgcaggtttacacttcgct
tcccctcaactcaatggtggagcctcggcctccacatttggacgctcctctgtggctgga
tttgagcctcactctcacaaacgaggtcctggactccctgggagcctgtccgcagcgact
gcaggaaaacctgcctactcattccatgttggagcagacagacagatgcagcctgtcgct
ttcccgaccgatgctctcacaggcccaggcatcccgcggcacgcacgacagatcaacaac
cttccccacggagaggtggtgtgtgcagtggccgtcagtaacttcacaaagcacgtgtac
actgggggaaaaggctgcgtcaaagtgtgggatatcagtcagccaggaaacagaagccca
gtctcacagctggattgtctgaacagggaaaactatatccggacctgcaagctcttcccc
gatggccgaagtctgattgtgggtggcgaagccaacaccatttccatctgggatctcgca
gctccgagtccgcgaataaaagctgaattgacctcgtcagcccctgcttgctacgcactg
gctattagccctgatgctaaagtctgcttctcctgctgcagcgacggaagtatttttgtc
tgggatctgcataatgaaacactcattcggcagttccaaggccactctgacggcgtcagc
tgcactgatatttcaaatgatgggaccaagctatggactggagcactggacaacacagtc
aggtgctgggacctgagggaggggcgtcaggtgcatcagcatgattttgcctcacagatc
tttgcactgggctgttgcccaacagggggatggctggctgttggcacggagagcagcaat
gtagaggttttacatgtcaacaaaccggataaatatcagcttcaccttcatgagagttgt
gttctgtcactcaaatttgcttattgcggtaaatggtttgtaagcactggaaaagacaac
cttctcaatgcatggagagtaccgtatggagcaagtatattccagtccaaagaatcttca
tctgtactatgctgtgacatctcagttgatgaccaatatgttgttactggctcaggggac
aagaaggccacggtttatgaagtaatttactga
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