Chiloscyllium plagiosum (whitespotted bambooshark): 122565510
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Entry
122565510 CDS
T08871
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122565510 (sin3b)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122565510 (sin3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
122565510
NCBI-ProteinID:
XP_043577489
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Position
31:43390394..43449629
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AA seq
1193 aa
AA seq
DB search
MPGVTQGSDLEPPPSQIPQRGGVAMAKIQAHLQQMNHQVQAQSFAVQKQAQQQQFQRLKC
AFQVEDALSYLDQVKMQFGNNPAVYNEFLDIMKEFKSQSIDTPGVIDRVSRLFQGHPDLI
LGFNAFLPPGYRIEIQKNKAVSVHGPTQAETQLLAEAAHDHTSATPTSPAAAAITPVSRS
SPAQSQTPLMGHKDESAERRVIREEPTARVLDHHDDPSSNDPHPVEFDNAISYVNKIKNR
YLERPEVYKSFLEILHTYQKEQLIVKDTKGKPYCGMTEDEVFAKVANLFRGQEDLLTEFG
QFLPDAKRSLFTGNAASEKDECKVVDDDDGSKHSQSKKRLRPALLPQVPPPLKKKLKLSS
VKDRSLASAGKHGTLREFSFFDRVRRILKSQEVYENFLRCIALFNQEVVSGSELLQLVTP
FLGKFPELFARFKLFLGQRELSPTQPVQRDRPVDGIAREIDYASCKRLGSSYRALPKTYQ
QPKCSGRTAVCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETN
LATIRVLESVQKKLTRMSPEDQDKYRLDNCLGGTSEVIHRRAIYRIYGDKAPEIIDGLKK
NPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKSYLKSLDHQGVNFKQNDTKALRS
KSLLNEIESVYDERQEQNSEEGCPGVSGPHLMFVYEDKQIMEDAASLIIYHVKRQPTIQK
EDKDHIKRIIYHFVPDLFFTQRGELSESEDSTDDEMESVPRHSQSSNADTGQKGTASPQS
SLAEERLDLRDQVAEYQKNLDDVYNLFFVNNNWYFFLRLHQILCYRLLRIYRQAEKQLLE
YQMEKEKEKQLQDGRKEKASDPAVELRLKQQSEIELEEYYPAFLDMVRNLLDGNIEPTQY
EDALREMFTIHAYIGFTVDKLIQNIVRQLQHLVSDDVCVQATEVYLSERKRGAAGGSLSS
QCVRATLEAAYQLKTERIMPDENCFKIMFIQSKGRVSMTIELLDTEEAPSDDPLELQNLT
SYMEQYAGPEAMQFDQTDGFFYKPVFLPRNLRKFRKWQQKQFLSMRNESRNNKQCCVGVE
NSNNIDCKFKLNTHKLVYVMNSEDFMYRCGALHRARESQCQVTRHQHQQFLEWHNRWLED
HVTDEMGELVQDWLMGEDVEDLIPCKTICESDTIHEIPVNRYRVQYSRCPPSP
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggtgactcaaggctctgacctggaacctccaccatcccaaataccccagcgt
ggaggagtggccatggccaagattcaggcccatcttcagcagatgaaccatcaggttcag
gctcagagttttgcagtgcagaagcaggcccaacaacagcagttccagaggctcaagtgt
gcttttcaggtggaagatgccttgtcgtacctggaccaggttaagatgcaattcggaaac
aacccagctgtttacaatgagttccttgacatcatgaaggaatttaaatcacaaagcatt
gatacacctggtgtgattgacagggtttcacgcctgttccagggtcaccctgaccttatt
ttgggtttcaatgctttcctgccacccggttacaggatagagatccagaaaaacaaagca
gtgagcgtgcatggacccacacaggccgagactcagctgctagctgaagcagcccatgat
cacacgtctgccactcctaccagtcccgctgccgctgccatcactccagtgagccgatcc
agtcctgctcaatctcaaacgcccctaatgggccacaaggatgagagtgcggaacgccgg
gtgatccgggaggaaccgactgcacgggtcttggatcaccatgatgatccatcctccaac
gatccacatcctgtggagttcgacaacgcaatcagttacgtgaataaaatcaaaaacaga
tacctggaacgtcctgaggtctacaaatcctttctggagattctgcatacctatcagaag
gagcagctgatagtgaaggataccaagggaaagccttactgcggcatgaccgaggacgaa
gtctttgcgaaagttgccaacttgttcagaggccaggaggatctgctgactgagtttggc
cagtttctcccagatgcaaagcgatctctgttcactggaaacgctgcatctgagaaggat
gagtgtaaagtggtcgatgatgatgatggatcaaaacactctcaaagcaagaaacgcttg
agaccagcacttctgccccaggtgccccctccgctcaagaaaaagctcaagttgtcaagc
gtgaaggatcggtccctagcctctgcaggcaagcatggcaccctgcgagagttcagcttc
tttgacagagtccgcaggattctgaaaagccaagaagtttacgagaatttcttgcgttgc
attgccctgttcaaccaggaggtggtatcaggttctgagctccttcaattggtcactcct
ttcctggggaagttccctgagctttttgcacgtttcaagttgttcttgggccagcgggag
ctctcgcccacgcaacctgtacagagagaccggccggtggatggaattgcccgggagatt
gactatgcttcgtgtaagaggctgggctccagttacagagctttacccaaaacataccag
caaccaaagtgcagtgggcggactgcagtctgcaaggaggttctgaatgacacttgggtc
tcatttccatcttggtcagaagactccacctttgtcagctcaaagaaaactccatacgaa
gagcagcttcatcgctgtgaggatgagaggtttgagcttgatgttgtcctggaaaccaac
ctcgctacaattcgtgtgcttgaaagtgtccagaaaaaactaacacggatgtctccagag
gatcaggataaatatcgtctggataattgtttgggagggacatcggaggtcatccaccgc
agagccatctatcgtatttatggagataaagcacccgaaataatcgatggacttaagaaa
aatccggccacagctgtccctgttgtgctgaaaagattgaaagccaaggaagaggaatgg
cgggaggcccagcaaggattcaacaagatctggcgggagcagtatgagaaatcctacctg
aagtcgctggatcaccagggggttaactttaagcaaaatgacaccaaggcactgcgctcc
aagagtttgttgaatgagattgagagtgtttatgatgagcgccaagaacagaactctgag
gaaggctgcccgggtgtcagcggcccccacctgatgttcgtctatgaggataaacagata
atggaggatgctgcgtctctgattatttatcatgtaaagcgacagccaaccattcagaag
gaggacaaggatcacatcaaacgcatcatctaccattttgtgcccgacctgttctttacc
cagcgcggtgaactgagtgaatctgaggattcaacagatgatgagatggagagtgttccc
cgacacagtcagagcagcaatgctgacactgggcagaaaggaacagcttctcctcagagc
agcttggctgaggagcggcttgacctgcgagaccaagtggcagaatatcagaagaacctg
gatgacgtctacaatctcttctttgtaaataacaattggtactttttcctaaggctgcat
cagattctgtgctaccggctgctgcgtatttacagacaggctgagaaacagctgctggaa
tatcaaatggagaaggagaaggagaaacaattacaggatgggagaaaagagaaagcaagt
gatcctgccgtggagctcaggctcaaacaacaaagtgagattgagttggaggagtattac
ccagcctttctggacatggtgaggaatttgctggatgggaacattgagcccacacaatat
gaagacgcactgcgtgaaatgttcaccattcatgcctacattggcttcacagtcgataaa
ctgattcaaaacattgtacggcagctgcagcatctggtgagtgatgatgtgtgtgtgcag
gcgactgaggtttatctgagtgagaggaagcgaggagcagctggagggagtttgtcctcc
cagtgtgtcagagcaaccctggaagcagcctatcagctgaagactgaacgcatcatgcct
gatgaaaattgcttcaagattatgtttatccagagcaaaggacgtgtttccatgactatt
gaattgttggatacagaggaggccccttctgatgaccccctggagctgcagaatttaaca
agctatatggagcagtatgcaggccccgaggcaatgcagtttgatcagacagacggattc
ttttacaagccagtatttttaccgagaaaccttcgaaaatttcgaaaatggcaacagaag
cagtttctgtcaatgcgaaatgagagtaggaacaacaagcaatgctgtgtcggggtggag
aactcaaacaacattgactgcaagtttaagctgaacactcacaaacttgtgtacgtcatg
aattctgaagacttcatgtatcgctgtggggcattgcacagggctcgcgagtctcagtgc
caggttacccgacaccagcaccagcagtttctggaatggcataaccgctggctggaggat
catgtgactgacgaaatgggcgagcttgtccaggattggctgatgggcgaggatgttgaa
gacctgatcccttgcaaaaccatttgtgaatctgacaccattcatgagattccagtcaat
agataccgcgtgcagtacagtcgctgccctccgtcaccgtga
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