Chlamydia pecorum E58: G5S_0034
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Entry
G5S_0034 CDS
T01466
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpm
Chlamydia pecorum E58
Pathway
cpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S_0034 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpm03019
]
G5S_0034 (pnp)
03016 Transfer RNA biogenesis [BR:
cpm03016
]
G5S_0034 (pnp)
Enzymes [BR:
cpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G5S_0034 (pnp)
Messenger RNA biogenesis [BR:
cpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5S_0034 (pnp)
Transfer RNA biogenesis [BR:
cpm03016
]
Prokaryotic type
tRNA degradation factors
G5S_0034 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
AphA_like
Motif
Other DBs
NCBI-ProteinID:
AEB41069
UniProt:
A0AA34WHG6
LinkDB
All DBs
Position
28190..30271
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AA seq
693 aa
AA seq
DB search
MTFSTISITLEEGRVLIFETGKIARQAGGSVVVRSQDTLVFTSVCAADLSETSDFLPFRV
DYQEKFSSTGKTLGGFIKREGRPTEKEILVSRLIDRSLRPSLPNRLMQDIQILSYVWSYD
GQTLPDPLAICGAGAALALSNIPQNNIVSGVRIGYIDGQWIVNPTKTELDNSPFDLVLAG
TENAILMIEGHCAFFTEEQVLEAIDYGHKHIITICKGLKDWQQRVGKEKNFDAVLPLPKE
VFTAVENRIAQPLPSLFDIEGKQALEAASQKMEEELIQELEKDDKIFSAFNIKSAFKALK
SDSMRTLIRERKIRADKRALTTIRPISIEVALLPRTHGSCLFTRGETQTVAVCTLGNETM
AQRYENLNGEGSSKFYLQYSFPPFSVGEVGRIGSPGRREIGHGKLAEKALAHALPDATQF
PYTIRIESNITESNGSSSMASVCGGCLALMDAGVPIKTPIAGIAMGLILDAEEAIILSDI
SGLEDHLGDMDFKVAGNLEGITAFQMDIKIEGITLDIMKQALAQAKEGRQEILRIMHENL
AAPKSDLSQYAPRIETMQIKPSKIATVIGPGGKQIRQIIEETGVQIDINDFGTVSISAVS
SEAINKAKKIIEGLVGEVEVGKVYRGRIVSIVPFGAFIEILPGKEGLCHISEFSKQRIEQ
VSDLFKEGDMIDVKLISINEKGQLKLSHKATLT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcaacaatttctatcactttagaagaaggtagagtgctgatatttgaaaca
gggaaaatcgccaggcaagcaggaggctctgttgttgtacgctcccaggatactttggta
tttacctctgtgtgtgcagctgatcttagtgaaacatcagacttcctccctttccgagta
gactatcaagaaaagttttcctctacaggaaaaactttaggtgggtttattaaaagagaa
ggccggcccacagagaaagaaatccttgtttctcgtcttatagaccgttctctgcgtcct
tccttgcctaaccgactcatgcaagatattcaaatattatcttacgtatggtcttatgat
ggacaaactcttcccgatcctttagctatttgtggggcaggagcggccctggctctttcc
aatatccctcagaataacattgtctctggggttcgtatcgggtatatcgatggtcagtgg
attgtcaatcccactaaaacagagcttgataattctccctttgatttagtcttagccgga
actgaaaatgcaattttaatgatagagggacactgtgctttcttcacagaagaacaggtg
ctagaggctatagattatggtcataagcatatcattacaatctgtaaggggttaaaagat
tggcagcaacgcgttggtaaagagaagaattttgatgctgttttgcctcttcccaaagaa
gtcttcacagctgttgaaaatcgcatagcacagccactcccttccttatttgatattgaa
ggcaagcaagctttagaagctgcatcacagaaaatggaggaagagcttatccaagaacta
gaaaaggatgataaaattttctcagcctttaatatcaaatctgccttcaaagctcttaaa
tctgattctatgcgtacacttatccgagaacgcaagattcgtgcagataagcgtgcttta
acaacaattcgccccataagcattgaagtagctctgctaccaagaactcatggaagctgt
ttatttactcgaggagagacacaaactgtcgctgtctgtaccttaggcaacgagaccatg
gcccaacgttatgagaacttaaatggcgaaggctcttctaaattttatttgcaatattct
ttccctcccttttctgttggagaagtaggaagaattggttccccaggaagacgagagata
gggcatgggaagcttgctgagaaagctttagctcatgcgcttcctgatgcaacacaattc
ccctatacaattcgtatagaatctaacattacggagtccaatggttcttcttctatggct
tctgtatgcggtggctgtttagcattaatggatgctggtgttcctattaaaacacctatt
gcaggaattgccatggggttaattttggacgcagaagaagctattatcctttctgacatc
tccggcttagaagaccatcttggagatatggactttaaagttgcagggaacctggaaggg
attacggcgttccagatggacattaagatcgaggggattaccttagatattatgaaacag
gctttggcacaagcaaaagagggccgccaagaaattttacggattatgcacgagaacctt
gctgcgcctaaatcagatttatctcagtatgctccacgtatagaaactatgcaaattaag
ccttcaaaaattgctacagtgattggccctggaggtaagcaaatccgtcagattattgaa
gaaactggcgttcagatagacattaatgattttggaacagtcagtatttctgcagtctct
tcagaagctataaataaggcaaagaagattatagaaggtttagttggtgaggttgaggtt
ggcaaggtatatagggggcggattgtttctattgttccctttggagcctttatagaaatt
cttccagggaaggaaggtctctgccacatttctgaattttctaaacaacgcatcgagcaa
gtctctgatctctttaaggaaggagatatgatagacgtaaaactcatcagcattaacgaa
aaaggtcagctcaagctgagccacaaagcgactcttacttag
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