Chlamydia pecorum E58: G5S_0379
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Entry
G5S_0379 CDS
T01466
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpm
Chlamydia pecorum E58
Pathway
cpm03030
DNA replication
cpm03430
Mismatch repair
cpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S_0379 (dnaE)
03430 Mismatch repair
G5S_0379 (dnaE)
03440 Homologous recombination
G5S_0379 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpm03032
]
G5S_0379 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpm03400
]
G5S_0379 (dnaE)
Enzymes [BR:
cpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S_0379 (dnaE)
DNA replication proteins [BR:
cpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S_0379 (dnaE)
DNA repair and recombination proteins [BR:
cpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S_0379 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEB41379
UniProt:
A0AA34RCV1
LinkDB
All DBs
Position
complement(391587..395312)
Genome browser
AA seq
1241 aa
AA seq
DB search
MSWIPLHCHSQYSILDATCPIKDLVAQAKAYDIPAIALTDHGNLFGAIDFYKTCVQQEIK
PILGCECYIAPGSRFDKKKEKRSRVAHHLILLCKNEQGYRNLCLLSSLAFIEGFYYVPRI
DKELLKKHSEGLVCLSACLSSSVSEAALESEEALEKELRWYQELFKENYFSEVQLHKMSE
EKIASLPEEWLKQEYYNFIDKQTRVNTAVLEVSKRLGIPSVATNDIHYLHPEDWQAHEIL
LNIQSGETIRTAKQNTYIPNPKRKTYSSREFYFKSPQQMLELFADVPEVIANTLEVAKLC
DVHFDFSKKHYPIYLPETLKTKEHYTEQDRYEASALFLRQLCEKGLSKYTPEVLAHIAKK
FPNQDPLELVKQRMEMEMSIIIPKGMCDYLLIVWDIIHWAKAHNIPVGPGRGSGAGSVML
FLLGITEIEPIRFDLFFERFINPERLSYPDIDIDICMEGREEVINYAIEKHGKDNVAQII
TFGTMKAKMAIKDVGRTLDMPLSKVNTIAKHIPELNATLAKSLETDPDLHQLYIDDVEAA
QVIDMAMRLEGSIRNTGVHAAGVIICGEPLTNHIPVCISKDSSMITTQFSMKPAESVGML
KVDLLGLKTLTSIHLAMSAIYQKTQKRLHMETLPLDDKMTFSLLHQGKTMGVFQMESKGM
QELAKNLRPDSFEEIIAICALYRPGPMDMIPSFINRKHGKENIDYDHPLMESILKETYGI
MVYQEQVMQIAGALANYSLGEGDVLRRAMGKKDHQQMVQERSKFCERAANNGIDPDIATI
IFDKMEKFASYGFNKSHAAAYGLITYTTAYLKANYPQEWLAALLTCDSDDVEKVGKLIRE
AQSMNIPILPPHINISSNHFVATNEGIRFALGAIKGVGKSFIEHLVKERELHGPYRSIQD
FIQRSNFTKISKKNMESLVDAGCFDCFEPNRDLALASLDALYNTVSKEKKEAATGVMTFF
SLDSMHEQNPLPVAAPKDVVFRTKKELLKKEKELLGIYLTEHPMDAFRETFPRLSVVPFG
EFENLSHGAVIRTVFIIDKITTKFSSKGQKKFAILRVSDGMDSYELPVWPEIYLQYQELL
EEDRLIYAILVIDKRSDSLRLTCRWMTDLASVNDQVLQECENTFDKIKVQTQKTSYINSN
LQKDSAIKTKPKGATSEEGTRSISPLTLSLDMDKLKHSHLCILKAILRKYPGSRALSLVF
TKGHKRIASISPDTEYFVSEEISALRLELDTEGLPIRVITV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttggatcccactacactgccattcgcagtattccatacttgatgcaacatgtcct
attaaagaccttgttgctcaagctaaggcatatgatatccccgcaatagcactcacagat
cacggaaatctctttggagccatagacttctataaaacatgtgtgcagcaagagatcaag
ccgattcttggttgtgagtgttatattgctccaggctctcggtttgataaaaaaaaagaa
aaacgcagccgtgttgctcatcatctcattcttttatgtaaaaatgagcaggggtaccgt
aatctttgcctattatcttctttagcatttattgaaggattttactacgtcccaaggatc
gacaaggaactactgaagaagcactctgaaggtcttgtgtgtttatctgcgtgtctttct
agttctgtatctgaagctgctttagaatctgaagaggcccttgaaaaggagcttcgctgg
tatcaagagcttttcaaggagaactatttttctgaagtacagcttcataaaatgtctgag
gaaaaaatagctagcttacctgaggaatggttaaagcaggagtattataacttcatagac
aagcaaacacgtgtcaacacggcagtactggaagtcagtaagcgcttgggcatcccttct
gtcgcgacaaatgacattcactatctacatcctgaagattggcaagcgcacgagattctt
cttaacatccaatctggagagaccattaggacggcaaagcaaaacacctatatccccaac
cctaaaagaaaaacctatagcagtagagaattttattttaagtctcctcagcagatgttg
gagctgtttgcagatgtccctgaggtgattgcaaatactttggaggtcgcgaagctttgt
gatgtgcactttgacttttcaaaaaagcactatcctatttatcttcccgaaacactaaag
accaaagaacattacaccgaacaagaccgctatgaagcctctgcgctctttttaagacag
ctttgtgaaaaaggcctctcgaagtacactcctgaagtccttgcgcacattgccaagaag
ttcccgaatcaagatcctttggagttggtcaagcaaagaatggaaatggagatgtccatt
atcattcctaaggggatgtgtgactacctcttgatcgtttgggacattatccattgggca
aaggcacataatattcctgtaggtcctggacgaggttctggagctgggtctgtaatgtta
ttcctcctaggcattacagaaattgagcccatacgctttgatttattctttgagaggttt
attaaccctgagaggctctcctatcctgatatcgatatcgatatatgcatggaaggccgc
gaggaagtgatcaactatgccatagaaaaacacgggaaagataacgtcgcgcagatcatt
acgttcggcacaatgaaagccaaaatggccattaaggatgtagggagaactttagatatg
cctttatctaaagtgaatactattgcgaagcacattcctgagctgaacgcgaccctagca
aaaagcctcgaaacagatcccgacttacatcaactctatattgatgatgtagaggctgct
caagtaattgacatggcaatgcgtcttgaaggttctattcgcaatacaggagtacatgct
gctggtgtgatcatttgtggagagcctctcacgaatcatattcctgtgtgcatttctaaa
gactcttctatgatcactacccaattctctatgaagcctgcggagagcgttggaatgcta
aaagtggatctcctagggttaaagaccctaacgagtatccacttggcgatgtctgcaatc
tatcagaaaacgcagaaacggcttcatatggagaccctccctttggatgacaaaatgacc
ttttctcttttgcatcaaggcaagactatgggagtgtttcagatggaatctaaggggatg
caggagcttgcaaaaaacctccggccagattcctttgaagagatcattgcgatttgtgct
ttgtatcgtcctgggcctatggatatgatcccttcgttcattaaccgaaagcatgggaag
gaaaatatcgattatgaccatcctctgatggaatcgattcttaaagagacttatggaatt
atggtctatcaagagcaagtcatgcagattgcaggagctcttgcgaattattctcttggg
gaaggtgatgttctccgtcgtgctatggggaagaaggaccatcaacagatggttcaggag
cgttcgaagttttgtgagcgtgcggcaaacaatgggatagaccctgatattgctacgata
atttttgacaaaatggagaagtttgcttcctatggcttcaataaatcccatgcagcagcg
tatggactaatcacatacactacggcatatcttaaggcgaactatccccaagaatggctt
gcagccctactcacctgcgactctgacgatgtagaaaaagttgggaagctcatccgcgaa
gcgcaaagtatgaacattcctatcttacctccgcatattaacatctccagcaaccacttt
gtcgcgacaaatgaggggattcgttttgctttgggagcgattaaaggcgttgggaagagc
tttatagaacatctcgttaaggagcgcgagcttcatggtccttatcggagcattcaagat
ttcatccaacgttcgaactttacgaaaatctctaagaaaaatatggaaagtcttgtagat
gcgggatgtttcgattgttttgaacccaaccgcgatcttgctttagcttctttagatgca
ttatataacacggtttctaaagaaaagaaagaagctgccacaggcgtgatgaccttcttt
tctttagactctatgcatgaacagaatcctcttccagttgcggcccctaaagatgttgtt
tttaggacaaaaaaagagctcttaaaaaaagaaaaggagctcctagggatttaccttact
gagcaccctatggatgccttccgggaaactttcccgaggctttctgttgttccctttggg
gagtttgaaaatctttctcatggagcagtaatccgcacggtgtttatcatcgataaaata
acgacgaagttctcctctaaagggcagaaaaagttcgcaattcttagggtaagtgatggg
atggattcttatgagcttcctgtctggcctgagatctatttacaatatcaagaattgtta
gaagaagatcgacttatttatgcgattcttgtaattgacaaacgtagtgattccttgcga
ctcacgtgccgttggatgacagacctcgcctccgtgaacgaccaggttctgcaggaatgc
gaaaatacatttgacaaaatcaaagtgcaaacacagaaaacttcctacatcaattcaaat
cttcaaaaagattctgcaatcaaaacaaagcccaaaggggcgacctcggaagaaggcaca
cggtctatttctccacttacgctatctttagatatggacaagcttaaacatagtcatcta
tgtatcttaaaggcgatcttaagaaaatatcctggttctagagcactatctttagtattt
accaaaggccataagcgcatcgcgtctatttcccccgatacggaatattttgtctctgag
gagatctcggcattacgtcttgagcttgatacagaaggacttcctattcgggtcattacg
gtttga
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