Chlamydia pecorum E58: G5S_0439
Help
Entry
G5S_0439 CDS
T01466
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpm
Chlamydia pecorum E58
Pathway
cpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S_0439 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpm03021
]
G5S_0439 (rho)
03019 Messenger RNA biogenesis [BR:
cpm03019
]
G5S_0439 (rho)
Transcription machinery [BR:
cpm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G5S_0439 (rho)
Messenger RNA biogenesis [BR:
cpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5S_0439 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
S1CSD-TOTE-2
Mor
AAA
OB_RNB
NACHT
AAA_16
DUF5855
Motif
Other DBs
NCBI-ProteinID:
AEB41433
UniProt:
A0AA34WHU1
LinkDB
All DBs
Position
439326..440717
Genome browser
AA seq
463 aa
AA seq
DB search
MKEERSSEVLPKVKENKKYASSAQEKPFVGESSVVVSEPEEALPVTTTKIAKLQRMGIEE
LNVLARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIGEGVLEVLPDGFGFLRSPTYNY
LPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERVL
FENLTPLYPNERIVMEMGKDKLVERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHAI
AVNNPDIVLIVLLIDERPEEVTDMIRQVCGEVVASTFDEQPERHIQVAEMVIEKARRLVE
HGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLTI
LATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRIYPAIDLIKSGTRKEELLYHPC
ELEKVYLFRQAIADLTATDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgcctaaggtgaaagaaaacaaaaagtatgca
agctctgcacaagaaaaaccttttgtaggagagagttctgttgttgtcagcgaacctgaa
gaagccttgcctgtgacaactacaaaaattgcgaagttgcaaaggatgggcatagaggaa
ctcaatgttttggctcgtcaatatggggtgaaaaacattggttccctaacaaaatctcaa
gtggtttttgagattgttaaggcgaagtctgagcgtccagatgagctcttaattggcgag
ggggtgttagaagtccttcctgatggttttgggtttttacgctcccctacatataattat
ttgccttctgctgaagatatttatgtttctcctgcacagatccgccgttttgatttgaaa
aagggcgatacgatcattgggactatacgttctccaaaggaaaaggaaaagtattttgcc
ttattgaaagtggataaaattaatgggtcgacgccagataaagcaaaagagcgcgttctt
tttgagaacttaacacctctatatcctaacgaaaggatcgttatggagatggggaaagac
aaacttgttgagcgtgttttggatttaacggctcctattgggaaagggcagcgagggttg
attgtagcgcctccacgttctgggaaaacggtgatattacaaagcatagcacatgcgatc
gctgtgaataatcctgacattgtgttgattgtattgctgattgatgagcgccctgaggaa
gttacggacatgattcgacaggtatgcggagaggtcgtggcttcaacatttgatgagcag
ccagaaaggcatattcaagtggcagagatggtcatagaaaaggctcgccgtttagtagag
catggtaaggatgttgtgatccttttggattcaattacgcgtttagcacgtgcgtacaat
acagtacagcctcactctgggaagattttgactggaggagtggatgcgagtgcgttacat
aaacccaagcgcttttttggtgctgccaggaatatcgaaggtgggggatccttaacgatc
ttagcgactgcattaatagatacaggctcgagaatggacgaggtaatctttgaagaattc
aaaggtactgggaatatggagttagtattagaccgtcgtttatcagataggagaatctat
cctgcaatagatttgattaagagcggcactagaaaagaggaacttctatatcatccttgt
gagttagaaaaggtgtatctcttccgtcaagcgatagcagatttgacagctacagatgcg
atgcatctgcttttgggtcggctgaagaagacgaatagtaacgctgaatttctgctttct
ttgaaagaataa
DBGET
integrated database retrieval system
