Chlamydia pneumoniae CWL029: CPn_0540
Help
Entry
CPn_0540 CDS
T00021
Symbol
pmp_20
Name
(GenBank) polymorphic membrane protein B Family
Organism
cpn
Chlamydia pneumoniae CWL029
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chlam_PMP
ChlamPMP_M
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AAD18680
UniProt:
Q9Z812
LinkDB
All DBs
Position
621694..626865
Genome browser
AA seq
1723 aa
AA seq
DB search
MKWLPATAVFAAVLPALTAFGDPASVEISTSHTGSGDPTSDAALTGFTQSSTETDGTTYT
IVGDITFSTFTNIPVPVVTPDANDSSSNSSKGGSSSSGATSLIRSSNLHSDFDFTKDSVL
DLYHLFFPSASNTLNPALLSSSSSGGSSSSSSSSSSGSASAVVAADPKGGAAFYSNEANG
TLTFTTDSGNPGSLTLQNLKMTGDGAAIYSKGPLVFTGLKNLTFTGNESQKSGGAAYTEG
ALTTQAIVEAVTFTGNTSAGQGGAIYVKEATLFNALDSLKFEKNTSGQAGGGIYTESTLT
ISNITKSIEFISNKASVPAPAPEPTSPAPSSLINSTTIDTSTLQTRAASATPAVAPVAAV
TPTPISTQETAGNGGAIYAKQGISISTFKDLTFKSNSASVDATLTVDSSTIGESGGAIFA
ADSIQIQQCTGTTLFSGNTANKSGGGIYAVGQVTLEDIANLKMTNNTCKGEGGAIYTKKA
LTINNGAILTTFSGNTSTDNGGAIFAVGGITLSDLVEVRFSKNKTGNYSAPITKAASNTA
PVVSSSTTAASPAVPAAAAAPVTNAAKGGALYSTEGLTVSGITSILSFENNECQNQGGGA
YVTKTFQCSDSHRLQFTSNKAADEGGGLYCGDDVTLTNLTGKTLFQENSSEKHGGGLSLA
SGKSLTMTSLESFCLNANTAKENGGGANVPENIVLTFTYTPTPNEPAPVQQPVYGEALVT
GNTATKSGGGIYTKNAAFSNLSSVTFDQNTSSENGGALLTQKAADKTDCSFTYITNVNIT
NNTATGNGGGIAGGKAHFDRIDNLTVQSNQAKKGGGVYLEDALILEKVITGSVSQNTATE
SGGGIYAKDIQLQALPGSFTITDNKVETSLTTSTNLYGGGIYSSGAVTLTNISGTFGITG
NSVINTATSQDADIQGGGIYATTSLSINQCNTPILFSNNSAATKKTSTTKQIAGGAIFSA
AVTIENNSQPIIFLNNSAKSEATTAATAGNKDSCGGAIAANSVTLTNNPEITFKGNYAET
GGAIGCIDLTNGSPPRKVSIADNGSVLFQDNSALNRGGAIYGETIDISRTGATFIGNSSK
HDGSAICCSTALTLAPNSQLIFENNKVTETTATTKASINNLGAAIYGNNETSDVTISLSA
ENGSIFFKNNLCTATNKYCSIAGNVKFTAIEASAGKAISFYDAVNVSTKETNAQELKLNE
KATSTGTILFSGELHENKSYIPQKVTFAHGNLILGKNAELSVVSFTQSPGTTITMGPGSV
LSNHSKEAGGIAINNVIIDFSEIVPTKDNATVAPPTLKLVSRTNADSKDKIDITGTVTLL
DPNGNLYQNSYLGEDRDITLFNIDNSASGAVTATNVTLQGNLGAKKGYLGTWNLDPNSSG
SKIILKWTFDKYLRWPYIPRDNHFYINSIWGAQNSLVTVKQGILGNMLNNARFEDPAFNN
FWASAIGSFLRKEVSRNSDSFTYHGRGYTAAVDAKPRQEFILGAAFSQVFGHAESEYHLD
NYKHKGSGHSTQASLYAGNIFYFPAIRSRPILFQGVATYGYMQHDTTTYYPSIEEKNMAN
WDSIAWLFDLRFSVDLKEPQPHSTARLTFYTEAEYTRIRQEKFTELDYDPRSFSACSYGN
LAIPTGFSVDGALAWREIILYNKVSAAYLPVILRNNPKATYEVLSTKEKGNVVNVLPTRN
AARAEVSSQIYLGSYWTLYGTYTIDASMNTLVQMANGGIRFVF
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctaccagctacagctgtttttgctgccgtactccccgcactaacagccttc
ggagatcccgcgtctgttgaaataagtaccagccatacaggatccggggatcctacaagc
gacgctgccttaacaggatttacacaaagttccacagaaactgacggtactacctatacc
attgtcggtgatatcaccttctctacttttacgaatattcctgttcccgtagtaactcca
gacgccaacgatagttccagcaatagctctaaaggaggaagtagcagtagtggagctaca
tctctaatccgatcctcaaacctacactccgattttgattttacaaaagatagcgtgtta
gacctctatcaccttttctttccttcagcttcaaatactctcaatcctgcactcctttct
tccagtagcagcggtggatcctcgagcagcagtagctcctcatcatctggaagtgcatct
gctgttgttgctgcggacccaaaaggaggcgctgccttttatagtaacgaggctaacgga
actttaaccttcactacagactctggaaatcccggctccctgactcttcagaatcttaaa
atgaccggagatggagccgccatctactcgaagggtcctctagtatttactggtttaaaa
aatctaacctttacaggaaatgaatctcagaaatctggaggtgctgcctatactgaaggc
gcactcacaacacaagcaatcgttgaagccgtaacttttactggcaacacctcggcaggg
caaggaggcgctatctatgttaaagaagctaccctattcaatgctctagacagcctcaaa
tttgaaaaaaacacttctgggcaagctggtggtggaatctatacagagtctacgctcaca
atctcgaacatcacaaaatctattgaatttatctctaataaagcttctgtccctgccccc
gctcctgagcccacctctccggctccaagtagcttaataaattctacaacgatcgatacc
tcgactctccaaacccgagcagcatccgcaactccagcagtggctcctgttgctgccgta
actccaacaccaatctctactcaagagaccgcaggaaatggaggcgctatctatgctaaa
caaggtatttcgatatccacgtttaaagatctgaccttcaagtctaactctgcatcggta
gatgccacccttactgtcgattctagcactattggagaatctggaggtgctatctttgca
gcagactctatacaaatccaacagtgcacgggaaccaccttattcagtggcaatactgcc
aataagtctggtgggggtatttacgctgtaggacaagtcaccctagaagatatagcgaat
ctgaagatgaccaacaacacctgtaaaggtgaaggtggagccatctacactaaaaaggct
ttaactatcaacaacggtgccattctcactacattttctggaaatacatcgacagataat
ggtggggctatttttgctgtaggtggcatcactctctctgatcttgtagaagtccgcttt
agtaaaaataagaccggaaattattccgctcctattaccaaagcggctagcaacacagct
cctgtagtttctagctctacaactgctgcatctcctgcggtccctgctgccgctgcagca
cctgttacaaacgcagcaaaaggaggggctttatatagtacagaaggactgactgtatct
ggaatcacatcgatattgtcgtttgaaaacaacgaatgccagaatcaaggaggtggggct
tacgttactaaaaccttccagtgttccgattctcatcgcctccagtttactagtaataaa
gcagcagatgaaggcgggggcctgtattgtggtgacgatgtcacgctaacgaacctgaca
gggaaaacactatttcaagagaatagcagtgagaaacatggaggtgggctctctctcgcc
tcaggaaaatctctgactatgacatcgttagagagcttctgcttaaatgcaaatacagca
aaggaaaacggaggcggtgcgaatgtccctgaaaatattgtactcaccttcacctatact
cccactccaaatgaacctgcgcctgtgcagcagcccgtgtatggagaagctcttgttact
ggaaatacagccacaaaaagtggtgggggcatttacacgaaaaatgcggccttctcaaat
ttatcttctgtaacttttgatcaaaatacctcttcagaaaatggtggtgccttacttacc
caaaaagctgcagataaaacggactgttctttcacctatattacaaatgtcaatatcacc
aacaatacagctacaggaaatggtgggggcattgctgggggaaaagcacatttcgatcgc
attgataatcttacagtccaaagcaaccaagcaaagaaaggtggtggggtttatcttgaa
gatgccctcatcctggaaaaggttattacaggttctgtctcacaaaatacagctacagaa
agtggtgggggtatctacgctaaggatattcaactacaagctctacctggaagcttcaca
attaccgataataaagtcgaaactagtcttactactagcactaatttatatggtgggggc
atctattccagtggagctgtcacgctaaccaatatatctggaacctttggcattacagga
aactctgttatcaatacagcgacatcccaggatgcagatatacaaggtgggggcatttat
gcaaccacgtctctctcaataaatcaatgtaatacacccattctatttagcaacaactct
gctgccactaaaaaaacatcaacaacaaagcaaattgctggtggggctatcttctccgct
gcagtaactatcgagaataactctcagcccattattttcttaaataattccgcaaagtcg
gaagcaactacagcagcaactgcaggaaataaagatagctgtggaggagccattgcagct
aactctgttactttaacaaataaccctgaaataacctttaaaggaaattatgcagaaact
ggaggagcgattggctgtattgatcttactaatggctcacctccccgtaaagtctctatt
gcagacaacggttctgtcctttttcaagacaactctgcgttaaatcgcggaggcgctatc
tatggagagactatcgatatctccaggacaggtgcgactttcatcggtaactcttcaaaa
catgatggaagtgcaatttgctgttcaacagccctaactcttgcgccaaactcccaactt
atctttgaaaacaataaggttacggaaaccacagccactacaaaagcttccataaataat
ttaggagctgcaatttatggaaataatgagactagtgacgtcactatctctttatcagct
gagaatggaagtattttctttaaaaacaatctatgcacagcaacaaacaaatactgcagt
attgctggaaacgtaaaatttacagcaatagaagcttcagcagggaaagctatatctttc
tatgatgcagttaacgtttccaccaaagaaacaaatgctcaagagctaaaattaaatgaa
aaagcgacaagtacaggaacgattctattttctggggaacttcacgaaaataaatcctat
attccacagaaagtcactttcgcacatgggaatctcattctaggtaaaaatgcagaactt
agcgtagtttcctttacccaatctccaggcaccacaatcactatgggcccaggatcggtt
ctttccaaccatagcaaagaagcaggaggaatcgctataaacaatgtcatcattgatttt
agtgaaatcgttcctactaaagataatgcaacagtagctccacccactcttaaattagta
tcgagaactaatgcagatagtaaagataagattgatattacaggaactgtgactcttcta
gatcctaatggcaacttatatcaaaattcttatcttggtgaagaccgcgatatcactctt
ttcaatatagacaattctgcaagtggggcagttacagccacgaatgtcacccttcaaggg
aatttaggagctaaaaaaggatatttaggaacctggaatttggatccaaattcctcgggt
tcaaaaattattctaaaatggacctttgacaaatacctgcgctggccctacatccctaga
gacaaccacttctacatcaactctatttggggagcacaaaactctttagtgactgtgaaa
caagggatcttagggaacatgttgaacaatgcaaggtttgaagatcctgctttcaacaac
ttctgggcttcggctataggatctttccttaggaaagaagtatctcgaaattctgactca
ttcacctatcatggcagaggctataccgctgctgtggatgccaaacctcgccaagaattt
attttaggagctgccttcagtcaggtttttggtcacgccgagtctgaatatcaccttgac
aactataagcataaaggctcaggtcactctacacaagcatctctttatgctggcaatatc
ttctattttcctgcgatacggtctcggcctattctattccaaggtgtggcgacctatggt
tatatgcaacatgacaccacaacctactatccttctattgaagaaaaaaatatggcaaac
tgggatagcattgcttggttatttgatctgcgtttcagtgtggatcttaaagaacctcaa
cctcactctacagcaaggcttaccttctatacagaagctgagtataccagaattcgccag
gagaaattcacagagctagactatgatcctagatctttctctgcatgctcttatggaaac
ttagcaattcctactggattctctgtagacggagcattagcttggcgtgagattattcta
tataataaagtatcagctgcgtacctccctgtgattctcaggaataatccaaaagcgacc
tatgaagttctctctacaaaagaaaagggcaacgtagtcaacgttctccctacaagaaac
gcagctcgtgcagaggtgagctctcaaatttatcttggaagttactggacactctacggc
acgtatactattgatgcttcaatgaatactttagtgcaaatggccaacggagggatccgg
tttgtattctag
DBGET
integrated database retrieval system
