Chlamydia pneumoniae CWL029: CPn_0563
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Entry
CPn_0563 CDS
T00021
Symbol
recJ
Name
(GenBank) ssDNA Exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cpn
Chlamydia pneumoniae CWL029
Pathway
cpn03410
Base excision repair
cpn03430
Mismatch repair
cpn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPn_0563 (recJ)
03430 Mismatch repair
CPn_0563 (recJ)
03440 Homologous recombination
CPn_0563 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpn03400
]
CPn_0563 (recJ)
DNA repair and recombination proteins [BR:
cpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CPn_0563 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPn_0563 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPn_0563 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAD18703
UniProt:
Q9Z7Z0
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All DBs
Position
complement(648290..650056)
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AA seq
588 aa
AA seq
DB search
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQEIHKFLYSHL
SSLYDPGLFLDMSKAVERLLLARDRKEHVMIYGDSDVDGMTGVALLVEFLRDIDVHVSYF
FLGAILKQHGETSTLIAKLKEEGITLLITVDCGITAGKEVSDITRQGIDVIITDHHMPTG
KIPHCVATLNPKLRDHTYPNRELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLV
TLGTITDVGVLLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPK
LNSLGRLDDPAKGVELLLTQDDERVDALIMELDNINRERQRIEAEVFQDVQEILNSNPEI
LKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQRGIGKGSARTIGSFPLLGVLK
KCSSLLLSYGGHDFAAGVIMKEDKVEDFKKKFVHLVNSSLKKGDTLPHLEIDAYADFDAI
DYDLLASMELFEPFGKGNLMPIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLG
RHADALKASWHYPLEIAYTPRLSQTSGSGVIHLLVRDFRISSEPRFSD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcagataatgcttctgcagcaggattgctctgggctcatcccaaggaagat
cctgcgtttcttggaatgattatcaaagaatttcacttgcctcccacagtggctcagatt
tttatctcaagaggattccaaacgattcaggaaatccataagttcttatacagccatctg
tcgagcctttatgatcctggactcttcctagatatgtcaaaggctgtagaacgcctgctc
ctggctagagatcgtaaagaacacgtcatgatttatggagatagcgatgtcgatggcatg
acaggcgtcgctctcctggtcgaatttttaagagatattgatgtccacgttagctacttc
tttcttggtgcgatactcaagcaacatggagagacctccacactcattgcaaagttgaaa
gaggaaggaattacactcctcatcaccgtagattgcggaattactgcaggaaaagaggtg
agtgatattacaagacaaggcattgatgtgatcattacagatcaccacatgccgacagga
aaaattccccactgcgtagctacattaaatcctaaattacgggatcatacctacccgaat
cgagaactcacaggcgtaggcgttgcttttaagctcgcaagaggagtactgaacgcactg
atatccagaaatcttgtccccaagagtcaaggtagcctgaaaaaattactcgatttagtc
acattaggaaccatcacggatgtcggtgttttgctaggggaaaaccgtgttatggtgcgc
tatgggattaaagaaattgccagaggcgcgcgacccggattgaataaactctgcgcatta
tgtggagtagaaaaaagcgaagtcacttcgacagatattgtcttgaagatcgcaccaaaa
ctcaatagcttgggacggttggacgaccctgcaaaaggtgttgaacttttactcacccaa
gatgatgaacgtgtagatgctctaattatggagctagataatataaatagagaaaggcaa
agaatagaagctgaggtatttcaagatgtccaagagatattaaatagtaatcctgagatt
ttaaagcaggctgctatagttctttcatccacggcatggcatgctcgtgtcatccctatt
atctcagcgcgtcttgctaagacttataacaaacctgtggtaatcatcgctatccaacga
ggaattggaaagggatcagcaagaactatagggtcatttcctctactcggagtcttaaag
aaatgctcctcgctccttttatcttacggcggacacgactttgcagcaggcgtgattatg
aaggaagataaagtcgaagattttaaaaaaaaattcgttcatctcgtgaactcttctctt
aaaaagggtgacacacttcctcatctcgaaattgatgcttatgcggattttgatgctata
gattatgatctcctagcttctatggaactattcgagccttttgggaaggggaatctgatg
cctatcttctattcaaaagtgcgccaggtacgctatccaaaagtattgcctggaaaccat
ctcaaactctacttaagccaaaaagaaagaaatcttgagggtgtcgccttcggtctggga
agacacgctgatgcattaaaagcaagttggcattaccctcttgagattgcttacacaccc
cgcttgtcccaaacttctggatcgggagtcatccacctgctggtccgggatttccgtatt
tcctcagaacctagattttcagactaa
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