Coprothermobacter proteolyticus: COPRO5265_0373
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Entry
COPRO5265_0373 CDS
T00773
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cpo
Coprothermobacter proteolyticus
Brite
KEGG Orthology (KO) [BR:
cpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpo03019
]
COPRO5265_0373
Messenger RNA biogenesis [BR:
cpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
COPRO5265_0373
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GFIT
Motif
Pfam:
HD
Cas3_HD
tRNA_anti-codon
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ACI16818
UniProt:
B5Y7J2
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All DBs
Position
complement(347397..348365)
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AA seq
322 aa
AA seq
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MEYVKRIFSIELKPGMTNVKELFVLQQKTYGSKKKDGSHYANLVLSDAKGSIRGFMELND
NGMINIENGQLVCCTGNIGEFNSEVTMYVSHIEQVDLSVIDEKTLALLYPSVENLEQLKA
ELRSLVESVENTEMKLLLEYVLFEKLWDQFIKKPAAKSIHHARIGGLLEHSVHVAEMVSD
LSRFYPDVNRDLALTGALLHDIGKVEEMSIPGGDYTDNGKLLGHVVHGSLMLAKFMDDLG
LDESLKQALLHIVLSHHGEKEWGSPVKPKTLEALLVAMADRTDAYLDHAQKIYRETKAKG
LKWSHYSEPLDAAIFVLDEDSN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgtaaagaggatcttttcaattgagttgaaaccgggaatgaccaacgtcaaa
gaactctttgtcctgcaacaaaaaacttacggctcaaaaaagaaagacggcagccactac
gcaaacttggtgctttctgatgctaaaggaagcattaggggcttcatggagctcaatgac
aacggcatgataaacattgagaacggccaactagtctgctgcacaggtaatattggcgaa
ttcaactctgaagtcaccatgtatgtctctcacatagaacaagtggatctatctgttatc
gacgagaagactttggcactactctatcccagcgtggaaaacctagaacaattaaaagca
gaactaagaagcttagttgaaagcgtagaaaacactgaaatgaaactactgttggagtac
gtactgtttgagaaactttgggaccaatttataaagaaaccagcagccaagagtattcac
cacgcgcgcattggtggacttttggagcactctgttcacgtagctgaaatggttagtgat
ctttcaaggttttatcctgacgtaaacagagacctggctctcacaggagcacttttgcac
gatattggcaaagtggaagaaatgagtataccagggggcgattacaccgacaacggcaaa
ctgctggggcatgtggttcacggctcgcttatgttggcaaaattcatggatgacttaggc
ttagatgaatccttgaaacaagcactgcttcacattgtgctaagccaccacggagagaaa
gaatggggttcaccagttaagccaaaaacattggaagctttgctggtagccatggcggat
cgcacagatgcatatttagaccatgctcagaagatttaccgtgaaaccaaggctaaaggg
ctaaaatggtcgcactacagcgaacccttagatgcagccatatttgttttggacgaggat
tctaactga
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