Coprothermobacter proteolyticus: COPRO5265_0516
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Entry
COPRO5265_0516 CDS
T00773
Name
(GenBank) DNA double-strand break repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpo
Coprothermobacter proteolyticus
Brite
KEGG Orthology (KO) [BR:
cpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpo03400
]
COPRO5265_0516
DNA repair and recombination proteins [BR:
cpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COPRO5265_0516
Archaeal homologous recombinant proteins
COPRO5265_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
AAA_27
ABC_tran
ABC_ATPase
CENP-F_leu_zip
AAA_16
DNA_ligase_ZBD
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACI16988
UniProt:
B5Y7X7
LinkDB
All DBs
Position
469384..472302
Genome browser
AA seq
972 aa
AA seq
DB search
MKPKKLEVTNFLGLKNLSLEFPEQGVFVITGPNGSGKSSILEAMYFALYGKTMRLPGDVK
NTAVINRNAQHSSDNPARAVVSFTFVQQGKEYLVRRELVRGVHKKDDVSHNAWLYDLSGH
AGLVPETGVVKVNNKVEDILGLTPEVFAATVFLGQGKITELVEAKPDKRRKIFDAILETD
HLVKMQELVRGDLRELQTKVKALLERKEILEQGPSAKDLEKELQDVEENMKQVIERVQVF
EQAAKELEEVQRIKGDMENTEADIAALRSEIEKLKEAAERDTRIRLIKELRSKYAELEQW
QIQLEELTKNKDKLGKDLSNWSERINELKLRVVQIEGQLNSLEDDVHLSKEKEILAQSLE
DLKALRSYLEEAWNAIVQCRLTSEEVLQLVLEERKLKSEINKLEHFVEVVSSSDGLINSY
FSAKQNMEKVEKEKQEVEKELFILEQSQATLKERISILSQDYPNLEQDFLVSRLAEPLHV
GDTCPVCGSEITKLREIPLPEDVLMEFSQLEMERYHLEQQQRIINERKAKLDKEEIELRE
VIKECESRLDLAVLEKMGSVKSFDAFQMWLSAQREALLERNQRVSQLEEQIQSKRDRLKS
TYCSTLKRLCNQKEIKEALLKGSVEEQLSQADQGIAEMERRKKELEAFSQQVREQRQDLM
LALAETNVELRKTQEREEDIRNTLQETIHRMKQLSGQVSTLLSELKEELSRAHISYEDYE
LLKSEQESGAADQLRALKGKLDVLEKRLEEQRKKYLSLLENRDVASEELPVQLEQAKSEY
EVLLGERGRLQASIEQALQKEAELNQVEVQLDALEKELNILSRLSDDLKADRFPDFYRGE
MMNEIVSSASSLLWEMSGGQFNLTFDSDSFRFDVVFDDGLSSDISSLSGGEKVLVALSLA
FAISQHFAGSLESIFLDEGLAWLDKENNTKLAQYLQNLEDGAILVGIVTHSEEFAINFQR
RLYVNGGKAQWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaaaaagctcgaagttactaattttctgggcctgaaaaatctttcactagag
tttccagagcagggtgtatttgtcataacaggacctaacggctctgggaaatcatccatt
ttggaagccatgtattttgcgctttatggtaagacaatgaggcttcctggtgatgtcaaa
aacaccgctgtcataaacaggaatgctcagcacagttccgataatccggccagggctgtt
gtgagtttcacctttgtgcagcaaggcaaagaatatctggtacgtcgcgagctggtgaga
ggcgttcataagaaagatgatgtaagtcataatgcttggttatacgaccttagcggccat
gccgggcttgttcctgaaacaggtgtagttaaggtaaacaacaaggttgaagatattctg
ggcttgacgccagaggtttttgcggcaacggtgttcttgggtcaaggtaaaataacagaa
cttgtagaggcaaaaccagataaaagacgtaagatctttgatgccattttggaaaccgat
catttagttaaaatgcaagaacttgtgcgcggagatcttagggaactgcaaactaaagta
aaggcccttctggaacgtaaggagattttggaacaaggcccttctgccaaggatttggaa
aaggaacttcaagacgtggaagagaacatgaagcaggttattgaaagggtgcaggttttt
gaacaggctgcaaaagaactagaagaagtgcagagaatcaaaggagatatggaaaacacc
gaggccgacatagcggctttaagaagtgaaatagaaaagcttaaggaagcagctgaacga
gatacgagaataagacttataaaagagctcaggtcaaaatatgctgagctggagcagtgg
caaatccagcttgaggaattaacgaagaacaaggataagctgggaaaggacttgtcgaac
tggtccgaaaggataaatgagcttaaactaagagttgtgcagatcgaaggacagttaaac
agtcttgaagatgatgtgcatttatctaaagagaaggaaatcctggctcaaagcttggag
gatttgaaagcactccgcagttatttagaagaagcttggaatgcaattgttcaatgccgc
ttgactagcgaagaagttctccagctagtcctcgaggaaagaaaactcaagtctgaaatc
aacaaattggagcattttgttgaagtggtttcttcgtctgatgggctaataaacagttat
ttcagtgcgaagcagaatatggaaaaggtggagaaagagaaacaggaagttgaaaaagag
ctattcatactggaacagtcccaagcgaccctaaaagagcgtatatccattctaagtcag
gattatcccaacttggaacaggactttttggtgagccgtctagctgaacctcttcatgtt
ggtgatacgtgcccagtctgtggcagcgaaattaccaagcttagggagattcccttgcct
gaggacgtgcttatggaatttagccagctggagatggagcggtatcacctggagcagcag
cagagaattatcaatgaaagaaaagccaaacttgacaaagaggagattgagctccgtgag
gtcattaaagaatgtgaatcgcggctcgatctggcagttttggaaaagatgggaagcgtg
aaatcgtttgatgcttttcagatgtggttgtctgctcagcgtgaagcgttactggaacgt
aatcagcgcgtgagccaacttgaggagcagatacagtctaagagagacaggttaaagagt
acatattgcagtactttgaagcggctttgcaatcagaaggaaataaaagaagccttacta
aaaggaagcgtggaagaacaactttcacaagctgatcaaggcatcgcggagatggaaaga
cgtaagaaagagcttgaagccttttctcagcaggtaagggagcagcgacaggatctcatg
cttgctttggctgaaaccaatgttgaacttagaaaaactcaggagagagaagaagatatc
agaaatactttgcaggagactatccaccgcatgaaacagctttctggccaagtcagcacc
ttattaagtgagctgaaagaagaactttctagagctcatattagctatgaggactatgag
cttctgaaaagcgagcaggagagcggagctgctgatcagctaagggccttaaaaggtaaa
ttggacgtacttgaaaagaggttggaagaacagcggaagaagtacttgtctttgctggag
aaccgcgacgtagctagtgaagagctgccagttcagctcgaacaagctaagagtgaatac
gaagttcttctcggtgagcgaggtcgcctacaagcttccattgaacaagctttgcagaaa
gaggccgagttgaaccaagtagaagtgcagcttgatgcgttggagaaggaattaaacata
ctcagccgtctctcggatgatttgaaagcggaccgctttcctgatttttaccgtggggaa
atgatgaatgaaattgtctcctcagcttccagccttttgtgggaaatgagcggtggtcag
tttaatctgacctttgactcagattctttccgtttcgacgtagtgtttgatgatggactt
agctctgacataagcagtttaagcggtggtgaaaaggttttggtagctctgtctctggcg
tttgcaataagtcaacattttgctgggtctctggaatccatttttctggacgaaggctta
gcttggcttgataaggagaacaatacaaagctggcacagtatcttcagaatttggaagac
ggtgccattttggttggtatcgtcactcattctgaggaatttgctataaacttccaaagg
cggctttacgtgaatggggggaaagcccagtggctttaa
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