Coprothermobacter proteolyticus: COPRO5265_1148
Help
Entry
COPRO5265_1148 CDS
T00773
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpo
Coprothermobacter proteolyticus
Pathway
cpo03030
DNA replication
cpo03430
Mismatch repair
cpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COPRO5265_1148
03430 Mismatch repair
COPRO5265_1148
03440 Homologous recombination
COPRO5265_1148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpo03032
]
COPRO5265_1148
03400 DNA repair and recombination proteins [BR:
cpo03400
]
COPRO5265_1148
Enzymes [BR:
cpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COPRO5265_1148
DNA replication proteins [BR:
cpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COPRO5265_1148
DNA repair and recombination proteins [BR:
cpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COPRO5265_1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
ACI17219
UniProt:
B5Y9K9
LinkDB
All DBs
Position
complement(1021205..1024591)
Genome browser
AA seq
1128 aa
AA seq
DB search
MANQFVHLHVHSAYSLLDGVTLPKKLVQRAKDLGMPAIAITDHGVTYGLVEFVSEAQRLG
IKPIVGVEGYQAQRDRKKREGNKDKEPFHLVLLVKNALGFRNLNILLTKAYLEGFYYRPR
FDWELLEQYHEGLIASSACLAGAIPRALLEGDEKKALELAGRYQDIFGKGNFYLEIMDHN
LADQQRVNKAIVELSKRTGIPLLVTNDVHYGRPEEYSIQDVLMAIATGATLNDPNRFKYE
TDQMYLKSADEMWERFSETPEALLNSLAIAEMVDFMLPLGEQHLPKFSVPEGYTENSYLR
KLTQDGLLKRYGDNPSKEVLDRMEYELSVIEKMGFAGYFLIVQDYINWAKSQGIPVGPGR
GSAAGSLVAYLTGITDVDPLQYGLLFERFLNPERISMPDIDVDFCARRRDEVLRYVRNKY
GEENVAQIATFGTLAARAAIRDVGRVLGVPLALVDRLSKSIPQNMELAHAEKLDDVKNLI
SQNPDLARVLEIAKQVEGLPRHASTHAAGVVIADKPLYEYVALQASSDEAGINVTTQLAK
DDVEKLGLLKMDFLGLRNMTVISDALRWIKERYGIDVDLNKLSKDDSKVYEMLSAGETVA
VFQLESSGFRSFLKDLKPTRFEEIIAAEALYRPGTLGSGGVKSYVDRKHGREPVDYFHDD
LKPILEETYGIIVYQEQIMQIASVIAGYSLGEADVLRRAISKKKEEEILKLREDFVSRGV
QRGYARETVEKIYETIVHFAEYGFNKSHSAAYAHVTYYTAWLKSYYPTEYFAALLASFVD
NTEKLKVYISEARRLGIKILPPDVNKSEHYFIPEGENEIRFGLLGIKNVGLAAVEEILKT
RATGGPFSSFQDFLLRVNDRVVNKKVTESLIRAGAFDSLGDRKSLLRQLSTGITTQTLFQ
IEDTSNDDLSLDPMEDEREYLGLYITTHPLERYMAILSNQNLTALDSVGEIDGLVQVGGF
VSSTRVRKSRNNNQYMTFTLEDLTSQVEVTVLPQKFDAFKPIISKPGIITLSARVESEDE
KSRLIAESLISFSPLSELDDKLKELDGKGVLRIVLRSEQVSVEKLKKLKVLLKQHKGPTP
VEFTVHLDGSIYRVLLPNSYWVSFTAELQEALFSLFNPMNVSFRSFGG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcagtttgtacacttgcatgttcacagtgcttattctcttctggatggtgtt
actctgcctaaaaagttagtgcagagggctaaagatcttggcatgccagcgatagccata
actgaccatggagttacttatgggttggtagagttcgtcagtgaagctcaaaggttggga
ataaagccgatcgttggggttgaaggttatcaagcgcaacgggatagaaagaaacgagaa
ggcaataaggataaagaaccatttcacctcgttttacttgttaaaaacgcccttggcttt
agaaacttgaacatattgcttacgaaagcctatttagaaggcttttactacagacccaga
tttgattgggagcttttagagcaataccatgaaggtcttatagcttcctctgcttgttta
gctggagcaataccccgtgctctacttgagggtgacgagaaaaaagctctggagctagcg
gggcgctaccaagacattttcggcaaaggcaacttttatttggaaataatggaccacaat
ttggcagatcagcagcgagttaacaaggccattgtcgagctttcaaagcgaaccggtatt
ccgctcctggttacaaatgatgtgcactatggtagacctgaagagtactccatacaagat
gtgctcatggcaattgccactggtgccactttaaacgatcctaacagattcaagtatgag
actgaccaaatgtacttaaagtcagccgacgagatgtgggaacgtttttctgaaactcct
gaagcactgcttaattcgcttgccattgctgagatggtggatttcatgttgccgctaggc
gagcaacatttaccaaaattctccgtgcctgaaggttatacggagaattcctatttaaga
aagcttactcaagatggactgctcaagaggtacggcgataaccccagtaaagaagttttg
gatcggatggaatatgagctttcagttattgaaaaaatgggatttgctggctatttcctc
atcgtgcaggattacataaactgggcaaaatcccaaggtattccagtggggcctggacga
ggcagtgctgcaggttccttagtagcttacctgaccggtataactgatgtggatcccctg
cagtatggtcttctttttgaaagattcttgaacccagagcgcatctccatgcctgatatt
gacgtagacttctgcgctcgcaggcgcgatgaagtccttaggtatgtcaggaataaatac
ggtgaggagaacgtggcacagatagcgacgtttggtaccttggctgcccgtgccgccata
agagatgtggggagagttcttggtgtgcctctagcattggtggaccggctttcaaaaagt
attcctcaaaacatggaattggcgcacgcagagaaactagacgatgttaaaaatctcata
agtcaaaacccagacctagcaagagttttagagattgcaaaacaggtagaaggtcttcca
agacatgcttccactcatgctgctggtgtggtgatcgctgacaagcccctttacgaatac
gtggctttgcaggcttcctcagatgaagctggcatcaatgtgaccactcaactagcaaaa
gacgatgtggagaaactgggcttgcttaagatggatttccttggtcttaggaacatgact
gtgattagcgacgcacttaggtggataaaggagcgctatggcatagatgtagaccttaat
aaactttccaaagatgattcgaaagtttacgagatgctttcagctggagaaacagtggca
gtgtttcagctggaaagttctggattccgttccttcctaaaagatcttaaacccacgaga
tttgaagagatcatagctgctgaggctttatacaggccaggtacattgggcagtggtggg
gttaagtcttatgtggataggaaacacggcagggaacccgtggactactttcacgacgac
ctgaagcccattttggaagagacatacggtattatcgtctatcaggaacaaataatgcaa
attgcttcagtcatagcaggttattctttaggcgaagctgacgtcctgcgtagagctatt
agtaagaaaaaagaagaagaaatacttaagttacgagaagatttcgtaagccgcggtgtg
caacgaggatatgccagagaaactgttgaaaagatttacgagaccatagtacattttgcc
gaatacggattcaataagtcccattcagcagcctatgcccatgtgacttactacacagct
tggttaaagtcttactatcctacagagtactttgcagctcttctggcaagttttgtggac
aacacggaaaagctcaaagtttacatatctgaagcacggaggttaggcataaaaatacta
cctcctgatgtgaacaaatcggagcattacttcattccggaaggtgaaaacgaaatacgt
tttggtttgcttggtattaaaaacgtgggcttagcagcggtggaagaaattctgaagacc
agagcaacaggaggaccatttagctcttttcaagattttttgctccgtgtgaatgatcgt
gtggtaaataagaaggtaaccgaaagccttattagggctggggcttttgatagtttgggc
gatcggaaaagtttactgcgtcagctttctaccgggataactactcaaactcttttccaa
attgaggacacttcgaacgacgacttatccttagatcccatggaagacgagcgtgaatat
ttggggctttatatcactacgcatcctttagagcggtacatggctattctgagtaatcaa
aacttgactgctctggattcagtgggagaaatagatggcttggtacaagttggaggcttc
gtttccagcaccagggtgagaaagagtagaaacaacaatcaatacatgacattcaccctg
gaggacttaacgtcgcaagtagaagtaacagtgttgccacaaaaattcgatgcttttaag
ccaatcatttcaaaacctggcattattacattaagtgcccgcgtagaatctgaagacgag
aagagtcgcctcatcgctgagtcactgatctcgttttctccgcttagtgaactagatgat
aaactcaaagagctcgatggtaaaggtgttttgcgcattgtcctgaggtcggaacaagtg
tcggtggaaaaacttaagaaactaaaggttcttttgaagcagcataaaggaccgaccccc
gttgaatttacagtccatttggatggatccatttaccgtgttttgttaccaaacagctat
tgggtttctttcactgctgaacttcaagaagcactttttagccttttcaaccccatgaat
gtatcgttccggagctttggtggatga
DBGET
integrated database retrieval system
