Cavia porcellus (domestic guinea pig): 100526649
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Entry
100526649 CDS
T07777
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100526649 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100526649 (Trpa1)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100526649 (Trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100526649
NCBI-ProteinID:
NP_001185699
Ensembl:
ENSCPOG00000011519
UniProt:
E3VTL3
LinkDB
All DBs
AA seq
1111 aa
AA seq
DB search
MKRSLRKLLRSGETEPQGAVYQGVDDSMPDSKDFKVVFEGNECRLQHIIKNRWKLNKYEE
ENVSALHHAAGEGQLELMKMIISGSSCEVLNLMDNYGNTPMHWAAENNQVESVKFLLIHG
ANPNLRNNNMMAPLHIAVQGMHNEMAKVLIEHSSTNINLEGENGNTAVMITCTKDNSEIL
EILLKKGAKLCKSNKWGDFPVHQAAFSGAKKCMELILKFGEEDGYSRQCHINFVNNKQVS
PLHLAVQSGNLEMIKMCLDNGAHIEKIENGKCMALHFAATQGATEIVKLMLSSYSGNSNI
INAVDGNHETLLHRASLFDHHELADYLISVGADINITDSEGRTPLVLATASASWNIVNLL
LSKGARVDIKDYLGRNFLHFTVQQPYGLKNLRPEFMQMQEIKALVMDEDNDGCTPLHYAC
KQGVHVSVNNLLGFNVSIYSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLH
GMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNMKCT
DRLDEEGNTALHFAAREGHAKAVALLLNHDADIVLNKQQASFLHIALHNKRKEVVITTIR
NKRWDECLKVFTHCSPSNRCPITEMIEYLPECMKILLDFCMIPSTEDKSCQDYHIEYNFR
YLQCPLQFTRKLPAEQEVHYEPLSTLNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRAHM
MNLGSYCLGLIPMTLLVINIKPGTAFNSTGIINETHNQTDTTNSYPIKVCMILVFLSSIF
GYCKEVIQIFQQKRNYFLDYNNALEWVIYTKSIIFVLPLFVSIPAYVQWQCGAIAIFLYW
MNFLMYLQRFENWGIFIVMLEVIFRTLLRSTGVFIFLLLAFGLSFYVLLNAQDAFRSPLL
SLVQTFTMMLGDVNYRDTYLQPFLKNELTYPVLSFVQLIAFTMFVPIVLMNLLIGLAVGD
IAEVQKHASLKRIAMQVELHTSLEKKLPIWFLRRVDQKSTIVYPNRPRYGPVLRLFHYFF
GVQETRQELPNTDTCLELEMLKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNH
SSFQDRFKKERLEQMNSKWNFVLRAVKTKPH
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtagcttgaggaagctgctgagatctggggagacggagccccagggcgcagtc
taccagggcgttgacgacagcatgcctgactccaaggactttaaggtggtttttgaagga
aatgaatgtagattacaacacattatcaagaaccgatggaaattaaacaaatatgaggag
gaaaatgtctctgctttgcaccatgcagcaggagagggtcagctagaactgatgaagatg
attatcagcggttcttcttgtgaagtgctgaatttaatggacaattatgggaatacccct
atgcactgggctgcagaaaacaaccaagttgaaagtgttaagtttcttctcatccatgga
gcaaacccaaacctacgaaacaacaacatgatggcacctcttcacatagctgtgcagggc
atgcacaatgagatggcaaaggtcttgattgaacacagcagtactaatattaatttggaa
ggagaaaatggaaacacagctgtgatgatcacatgtaccaaagataacagtgaaatcctg
gaaattttgttaaaaaagggagctaaactgtgtaagtcaaataaatggggagactttcct
gttcaccaggctgcattttcaggtgccaaaaaatgcatggaattaatattaaagtttggt
gaagaagatgggtacagccgccagtgtcacattaactttgtgaataacaagcaagtcagc
ccacttcatttggcagttcaaagtggcaatttagaaatgattaaaatgtgtctggacaat
ggtgctcacatagagaagatagagaatgggaagtgcatggctctgcattttgctgcaacc
caaggagccacggagattgttaagctgatgctatcgtcctattctggtaacagcaatatt
attaatgcagtcgatggaaatcatgagaccctgcttcacagggcctcactatttgatcac
catgaactagcagactacttaatttcagtgggggcagatatcaatatcactgattctgaa
ggacggactccacttgtattagcaactgcctctgcatcctggaatattgtaaatctgcta
ctatctaaaggtgccagagtagacataaaagattatcttggacgtaattttttacacttt
actgtgcagcaaccatatggattaaaaaatttgcgacctgaatttatgcagatgcaagag
atcaaggcgctggtaatggatgaagacaatgatggctgcactcctttgcattacgcatgc
aaacagggagtccatgtctctgtaaataacctacttggttttaatgtgtccatttattcc
aaaagcaaagataagaaatcacccctgcattttgcagccagttatgggcgtatcaatacc
tgtcagaggctcctacaagacataagtgacacaaggctcttaaatgaaggggaccttcat
gggatgactccactccatctggcagcaaaaaatggccatgataaagtagttcagcttctt
ctgaaaaaaggtgcattatttctcagtgaccacaatggctggactgctctgcaccatgct
tccatgggagggtacactcagacaatgaaggtcattctggatactaatatgaagtgtaca
gatcggctcgatgaagaagggaacactgctctccacttcgctgcaagagaagggcacgcc
aaagctgttgcacttcttctgaatcacgatgcggacatagttttgaacaagcagcaggcc
tcctttctgcacattgcgctccacaataagaggaaggaggtggtcattaccaccatcagg
aacaaaagatgggatgaatgtcttaaggtttttactcattgttctccaagtaatagatgt
ccaatcacggaaatgatagaatacctccctgaatgcatgaaaattcttttagatttctgc
atgataccttccacagaggacaaatcctgccaagactaccatattgaatacaatttcaga
tatcttcagtgccctttgcaattcaccagaaaattaccagctgaacaagaagttcattat
gagcctctttcaacactcaatgtcatggtacagcataatcgcatagagcttctcaatcat
cctgtgtgtaaggaatatttacttatgaaatggtgtgcctatggatttagagcccacatg
atgaatctaggatcttactgtcttggtctcatacccatgacccttcttgtcattaatata
aagccaggaacagctttcaactcaactggaatcatcaatgaaactcataatcaaacagac
acgacgaattcatatccaattaaagtttgtatgatcttggtttttttatcaagtatattt
ggctattgcaaagaagtgatacaaattttccaacagaaaaggaactactttttagattat
aacaatgctttggaatgggttatctacacgaaaagcatcatttttgtgctgcccttgttt
gtcagcataccagcgtacgtgcaatggcaatgtggagcaattgcgatattcttgtattgg
atgaacttcttaatgtatcttcaaaggtttgaaaattggggaattttcattgttatgctg
gaggtaattttcagaactttgttgaggtctacgggagtatttattttccttcttttggct
tttggacttagcttttatgtccttctaaatgcacaggatgcctttaggtcaccattgctt
tccttagtccagaccttcaccatgatgctaggagatgtcaattatcgagacacatacctt
caaccctttttgaaaaatgaattgacatatccagttctgtcttttgtacaacttatcgcc
tttacaatgtttgtcccaatagtcctaatgaatttacttattggtttagcagttggtgac
attgctgaggtccagaaacatgcatcattgaaaaggattgctatgcaagtagaacttcat
accagtttagaaaaaaagctgcccatttggttcttacgcagagtggatcagaagtccacc
atcgtgtatcccaacagacctagatatggaccagtgttacgtttatttcattattttttt
ggtgtccaagaaacaagacaagaattgccaaatactgatacatgtttagaattagaaatg
ttgaaacagaaataccggctgaaagacctcacttcactcttagaaaagcagcatgaactt
attaaactcatcattcagaagatggagatcatctctgagaccgaggatgaagataaccac
tcttcttttcaagacaggttcaaaaaagagcggctggaacaaatgaacagcaaatggaat
tttgttttaagagcagttaagacaaagccacactaa
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