KEGG   Cavia porcellus (domestic guinea pig): 100712689
Entry
100712689         CDS       T07777                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100712689 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpoc03041]
    100712689 (Sf3a1)
Spliceosome [BR:cpoc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100712689 (Sf3a1)
 Complex B
    100712689 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    100712689 (Sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 100712689
NCBI-ProteinID: XP_003478367
Ensembl: ENSCPOG00000014589
UniProt: H0VRD6
LinkDB
Position
Unknown
AA seq 793 aa
MPAGPVQAVPPPPPVITEPKQPTEEEGSSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQAAQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKSEETPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcctccgccgccgccggtgatcaccgagcccaaa
cagccaactgaagaagaaggatcttcaaaggaggattctaccccttccaagccagtggtg
gggattatttaccctcccccagaggtcaggaacatcgtagacaagactgccagctttgtg
gccagaaatgggcctgaatttgaagctaggatacgacagaatgagatcaacaaccccaag
ttcaactttctaaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccctcagctgccatccccaaggtcatgcaacagcag
cagcaagccgcccagcagcagctgcctcaaaaggtccaagcccaagtgatccaagagacc
attgtgcccaaggagcctcctcccgagtttgagttcatcgccgatcctccatccatctca
gcctttgacctggatgttgtgaagctgacagctcagtttgtggccaggaatggacgccag
ttcctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgccca
caacacagcctcttcaactacttcacaaaactggtggagcagtatactaagatcttaatt
ccacccaaaggcttatttacaaagctcaagaaagaagctgaaaatcctcgagaagttttg
gatcaggtgtgttaccgagtggagtgggccaagttccaggaacgagagaggaagaaggag
gaggaggaaaaggagaaggagcgggtagcctatgctcaaattgactggcatgattttgtg
gtggtagagacagtggacttccaacctaatgagcaagggaacttccctccgcctactaca
ccagaagagctgggtgcccgaatactcattcaggagcgctatgagaagtttggggagagt
gaggaagttgagatggaggtcgagtctgatgaggaagatgagaaacaggagaaatcagag
gaaactccttcccagctggaccaagatactcaagtccaggatatggatgagggttcggat
gatgaagaggaagggcagaaagtgcccccacccccagagacacccatgcctccacctctg
cccccgactccagaccaagtcattgtccgcaaggactacgatcctaaagcttccaagccc
ttgcctccggcccctgctccagatgaatatctcgtgtctcccattacgggagagaagatc
cctgccagcaaaatgcaggaacacatgcgcatcgggcttctggatccccgctggctggag
cagcgagatcgatccatccgcgagaagcagagtgacgatgaggtgtatgcaccaggtctg
gatattgagagcagtttgaagcaattggctgagcggcgtactgacatttttggtgtggaa
gaaacagcaattggtaagaagattggtgaggaggagatccagaagccagaggaaaaggtc
acctgggatggtcactcaggcagcatggcccggacccagcaagctgcccaggccaacatc
actctccaagaacagatagaggccattcacaaggccaagggcttggtgcctgaagatgat
accaaagagaagattggccccagcaagcccaatgaaatcccccagcagcctccaccccca
tcttcagccacaaacatccccagttcggccccacccatcacttcagtgccccggccacct
gcgatgccacctcctgtccgaactacagttgtgtctgcagtgcccgtgatgccccgtcca
ccaatggcatctgtggtccgactgcccccgggctcagtgattgcccccatgcctcccatc
atccatgcacccaggatcaatgtggtgcccatgcctccctctgcacccccaatcatggca
ccccgtccacccccaatgattgtaccaacagcttttgtccccgccccacctgtggctcct
gtcccagctccagctccaatgcctcctgtgcaccctccgcctcccatggaggatgagcct
gcctccaagaaactgaaaactgaggacagcctcatgcctgaggaagagtttctgcgcagg
aacaagggtccagtatctatcaaagtacaggtgcccaacatgcaagacaagacggaatgg
aagctgaatgggcaggtgctggtcttcaccctcccactcacagaccaggtctctgttatc
aaggtaaagattcatgaagccacgggcatgcctgcagggaaacaaaaattacagtatgag
ggcatcttcatcaaggattccaactctctggcttactacaacatggccaatggtgctgtc
atccacctggccctcaaggagagaggtggcagaaagaagtag

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