Cavia porcellus (domestic guinea pig): 100712742
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Entry
100712742 CDS
T07777
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100712742 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100712742 (Prpf8)
Spliceosome [BR:
cpoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100712742 (Prpf8)
Complex C
U5 SnRNP specific factors
100712742 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100712742
NCBI-ProteinID:
XP_003469727
Ensembl:
ENSCPOG00000010379
UniProt:
H0VGR9
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccataccgagggccgggtaacccggtacccggccctctagccccg
ttgccggactatatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcagttg
caagccaagcgctatgcagaaaaacggaagtttggatttgtggatgctcagaaggaagac
atgcctccagagcatgtcaggaagataatcagagaccatggagacatgaccaataggaag
tttcgccatgacaaaagggtctatttgggtgccctgaagtacatgccccatgcagtcctc
aagcttctggagaacatgcctatgccttgggagcagattcgggatgtacctgttctgtac
cacatcactggagcgatttctttcgtcaatgagattccctgggtcattgagccagtctac
atctcccagtgggggtcaatgtggattatgatgcgaagagaaaaaagagacaggaggcat
tttaaaaggatgcggttccccccttttgatgatgaggaaccgcccttggactatgctgac
aatatcctagatgttgagcccctggaagccattcagctagagctggaccctgaggaggat
gcccctgtactggactggttctatgaccaccagccactgcgagacagcaggaagtacgtt
aatggctccacttaccagcgttggcagttcacgttacctatgatgtccactctctaccgc
ttagccaatcagcttctgacagatttagtggatgacaactatttctatctgtttgaccta
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcatcattcggcagcctattcgcactgagtacaagattgcttttccttacttatac
aacaaccttccacaccatgtccaccttacctggtaccacactcccaatgtcgtgttcatc
aaaactgaggatcctgacttgccagctttctacttcgaccctttgattaacccgatttcc
cataggcattcagtcaagagccaggaaccactgccagatgatgacgaagaattcgagctc
ccagagtttgtggagcccttcctgaaggacacacccctgtacacagacaacacggccaat
ggcattgccctgctttgggctccacggcctttcaatttacgctctggtcgcacccgccgg
gctctggacataccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagagtctcctaccagaagctgcttaagtactacgtgctgaatgctctgaag
catcggcctcctaaggctcaaaagaagaggtatctgttccgatcttttaaagctaccaaa
ttctttcagtccacaaaactggactgggtggaagtgggactccaagtttgccgtcagggt
tacaacatgctcaacctcctcatccaccgtaaaaacctcaactacctgcacctggattat
aattttaacctcaagcctgtgaagaccctcaccaccaaggaaagaaagaaatcccgtttc
gggaatgctttccacctatgtcgggaagtcctgcgtttaacaaagctggttgtggacagt
catgttcagtatcgactgggcaatgtggatgccttccagctggcagatggattgcagtat
atatttgcccatgtgggacagctgacaggcatgtatcgatataagtacaagctgatgcga
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgcttcaacacgggacct
gtggggaaaggccccggctgtggcttctgggctgctggttggcgggtctggctgtttttc
atgcgaggcattactcctttgctagagcgatggctgggcaatctcttggcccggcagttt
gaaggccgacactcgaaaggggtggcaaagacagtgacaaagcagcgagtggagtcccat
tttgaccttgagcttagggcagctgtgatgcatgacatcctggacatgatgcctgagggg
atcaaacagaacaaggcccgaacaatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaatattccttggaaggttccaggactgccaacacccatagagaacatgatcctt
cgatatgtgaaggccaaagctgactggtggaccaacactgcccactacaaccgagaacgg
atccgtcgaggagccactgtggacaagactgtttgcaaaaagaaccttggccgcctcact
cggctctacttgaaggcagaacaggagcggcagcacaattacctgaaggatgggccttac
atcacagcagaggaagcagtggcagtgtataccaccactgtgcattggttggaaagccgc
aggttctcacccatcccattccccccactgtcctacaagcatgacaccaagttgcttatc
ttggctttggagcgactcaaggaagcttatagtgtgaaatctcggttaaaccagtctcag
agggaggagctaggtctgattgaacaagcctatgataacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaggtgggcattgagttcatggat
ctgtatagtcaccttgtgccagtatatgacgtggaacctctggagaagataactgatgca
tacctagaccagtacctgtggtacgaggcagacaagcgccgccttttcccaccctggatc
aagcctgcagacacagaaccacctccactgcttgtttacaaatggtgccaaggcatcaat
aaccttcaggatgtgtgggagacaagtgaaggcgagtgcaatgtcatgcttgaatctcgt
tttgagaagatgtatgagaagattgacttaaccctgctgaataggctactacgactcatc
gtggaccataacatagctgactacatgacagccaagaacaatgttgtcatcaactataag
gatatgaaccacacaaattcatatgggatcatcagaggcctgcagtttgcctcattcatc
gtgcagtactatggcttggtgatggatttgctggtgttgggattacaccgggccagtgag
atggcagggccccctcagatgccaaatgactttcttagtttccaggatatagccactgag
gctgcccaccccatccgactcttctgtcgatacattgaccgcatccatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgctatctgacagagcatcctgaccct
aacaatgaaaacatcgttggttataataacaagaagtgctggccccgagatgcccgcatg
cgccttatgaagcatgatgtcaacctgggtcgggcagttttctgggacatcaagaaccgc
ctgccacgatcagttacaacggttcagtgggagaacagcttcgtgtctgtgtatagtaag
gacaaccccaacttgctgttcaacatgtgtggctttgagtgccgcatcctgcccaaatgc
cgcaccagctacgaggagttcacccataaggatggggtttggaacctgcagaatgaggtc
actaaggagcggacggcccagtgtttcctgcgtgtggacgatgagtcaatgcagcgcttc
cacaaccgcgtgcggcagatcctcatggcctctggctccaccactttcaccaagattgtg
aataagtggaatacagctctaattggcctcatgacatactttcgggaggctgtggtgaat
acccaggaactcttggacttactagtaaagtgtgagaacaagatccagacacgtatcaag
attggactcaactccaagatgccaagtcggttcccccctgttgtgttctacacccccaag
gaattgggtggactcggcatgctttcaatgggccatgtgctcatcccccagtctgacctc
aggtggtctaagcagactgatgtgggtatcacacactttcgctcaggaatgagccatgaa
gaagaccagctgatccccaacttataccgttacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccatcgctcagaac
agacgactgactttagaagatctagaagactcatgggatcgtggcattcctcggattaat
actcttttccagaaggaccggcacacgttggcttatgataagggctggcgtgtccgaact
gactttaaacagtatcaggttttaaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaatctaaacaactatcgcacagatatgatccaggcgctgggtggt
gtggaaggcatactggaacacacactcttcaaaggcacttacttccccacctgggagggt
cttttctgggagaaggccagtggctttgaagaatctatgaaatggaaaaagctaactaat
gcacagcgatcaggattgaaccagattcccaatcgtagattcactctctggtggtcccca
accattaaccgagccaacgtgtatgtgggcttccaggtacagctggatctgacaggtatc
ttcatgcatggcaagatccccaccctgaagatttctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgaccaggaa
ctagatgcactggaaattgagacagtacaaaaggagacaatccatcctagaaagtcctat
aagatgaactcttcctgtgcagatatactgctctttgcctcctataaatggaatgtttcc
aggccctcactgctggcagactccaaggatgtgatggatagcactaccactcagaaatac
tggattgacatccagttgcgctggggagactatgattcgcacgacattgagcgttacgcc
cgggccaaattcctggactacaccacagacaacatgagtatctatccttcacccactggt
gtgctcatcgccattgacctggcttacaacctgcacagtgcctatggaaattggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacgaatccgcaaggggcttcagctctattcctctgagcccactgag
ccttacctgtcctctcagaactatggcgagctcttctccaatcagattatctggtttgtg
gatgacactaatgtctacagagtgactatccacaagaccttcgaagggaacttgacaacc
aagcctatcaacggggccatctttatcttcaacccacgtacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaaacgtttggggcagctggcgaagtggaag
acagctgaggaggtagctgcccttattcgatctttgcctgtggaggagcagcccaagcag
atcattgtcaccagaaagggcatgctggatccgttggaggtacatttattggacttcccc
aacattgtgatcaaaggatcggagctgcagcttcccttccaggcttgtctcaaggtggag
aagtttggggatcttatccttaaagccactgagcctcagatggttctcttcaacctctat
gatgactggctaaagaccatctcatcctacacagctttctcccgtctcatcctgattctg
cgtgctctgcatgtgaacaatgaccgggcaaaggtgatcctgaagccagacaagaccact
attacagaaccccaccacatctggcccaccctgaccgatgaggagtggatcaaggtggag
gtgcaactcaaggatctgatcctggccgattatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaatcagagacatcatcctgggaatggagatctctgcgccgtct
cagcagcggcagcagatagccgagattgaaaagcagaccaaggaacagtcccagctgact
gcaacacagactcgcacagtcaacaaacacggtgatgagatcattacctccaccaccagt
aactatgagacccagactttctcatcaaagactgaatggagagtcagggccatatccgct
gccaatctgcacctacggaccaatcacatttatgtttcatctgatgacattaaggagact
ggctacacttatattcttcccaagaatgtgcttaagaaatttatctgcatatctgacctt
cgtgcccaaattgcaggatacctatatggggtgagcccaccagataacccccaggtgaag
gagatccgatgcatcgtgatggtgccgcagtggggcacgcaccagactgtgcatctgcct
ggccagctgccccagcatgagtatctcaaggagatggagcccttaggttggatccacaca
cagcccaatgagtccccccagctgtcaccccaggatgtcacaacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagaccatcatcatcacttgcagcttcacccca
ggctcctgcacgctgacagcctacaagctgacccccagtggctatgaatggggccggcag
aacacagacaaaggcaacaaccccaagggttacctcccctcacactatgagagggtccag
atgctgctgtcagaccgcttcctcggcttcttcatggtccctgctcagtcctcatggaat
tacaacttcatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtccacagaccatcccacttcctcaactttgccctccta
caggagggcgaggtctactctgcagaccgggaggacctctatgcctag
DBGET
integrated database retrieval system
