Cavia porcellus (domestic guinea pig): 100712816
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Entry
100712816 CDS
T07777
Symbol
Lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100712816 (Lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
100712816 (Lrfn1)
Cell adhesion molecules [BR:
cpoc04515
]
Immunoglobulin superfamily
SALM family
100712816 (Lrfn1)
Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100712816 (Lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
Fndc10
CbiM
Sp38
C2-set_3
Motif
Other DBs
NCBI-GeneID:
100712816
NCBI-ProteinID:
XP_003467305
Ensembl:
ENSCPOG00000024527
UniProt:
A0A286XGC7
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MAPGPFASALLSPPPAALPFLLLLWAGASHGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVEPAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTQVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
DSSAERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATTLPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDSRRGKGTSRSPPRVSHVCSQTNGASAQLAAPPTQ
DRYETLREVAPGREVTAPAAVEAKTTAVEATSVEPEVVLRRSLGGSATSLCLLPSEETSG
EESRAGTGPRRSRSGALGPPVSAPPTLALVPGAASARPRPQQRYSFDGDYGALFQSHSYP
RRARRTKRHRSTPHLDGARGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggcccctttgcctcggcgctcctctcgccgccacctgctgccctgcccttc
ttgctgctgctctgggccggggcatctcatggccagccgtgtcccggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagaccggcttgctcttcgtgcca
cccgccatcgataggcgcgtggtggagctgcggctcaccgacaacttcatcgcagctgtg
cgccgccgcgattttgccaacatgaccagcctggtgcatctcaccctctcccggaacacc
attggccaggtggcggccggcgcctttgcagacctccgcgccctccgtgccctgcacctc
gacagcaatcgcctggctgaggtacgcggtgaccagctccgaggactgggcaacctccgc
cacttgatcctcggcaacaatcagatccgcaaggtggaaccggctgcctttgatgccttc
ctgtccactgtggaggacctggatctgtcctacaacaacctagaggccctgccgtgggag
gctgtgggccagatggtgaacctcaacacacttacgctggaccacaatctcatcgaccac
atcgcggaggggacctttgtgcaactgcacaagctggtgcgcctggacatgacctccaac
cgcttgcacaaactcccacctgatgggctcttcctgaggtcccagggcgggggacccaaa
ccacccacgccgctaactgtcagttttggtggaaacccactgcactgcaactgcgagctg
ctttggctacggcggctgacccgggaggatgacctggagacctgcgccacccctgagcac
ctcactgaccgatacttctggtccatccctgaggaggaattcctgtgtgaacccccgcta
atcacacggcaggctgggggccgggccctggtggtagagggtcaggcggtcagcttgcgc
tgccgggcggtgggggaccctgagcctgtggtgcattgggtagcgcctgatgggagactg
ctggggaactccagccggacccaggtccggggagatgggacgctggatgtgaccatcacc
actttgcgggacagtggcacgttcacttgcattgcctccaatgcagcaggggaagccaca
gcgcccgtggaggtgtgtgtggtacctttgccgctcatggcacccccgccagctgcccca
ccacctctcactgagcccggctcctctgacatcgccacaccaggcagacctggtgccaac
gattcttctgctgagcgcaggctggtggcggcggagcttacctctagctcggtgcttatc
cgctggcctgcccagaggccagtgcctggcatccgcatgtaccaggtccagtataacagc
tcagcggatgactccctcgtctacaggatgatcccgtcaaccagccagaccttcctggtg
aatgatctggcagcaggccgtgcctatgacttgtgtgttttggcagtctacgacgacggg
gccacgaccctgccggcaacgagagtggtgggctgcgtgcagttcaccactgctggggat
cctgcaccttgccgtccgctgagggcccattttttgggtggcaccatgatcatcgccatc
gggggcgtcattgtcgcctcagtccttgttttcatcgttctgctcatgattcgctacaag
gtgtatggcgatggggacagtcgccgaggcaagggcacctctaggtcgcccccgcgggtc
agccacgtatgctcgcagaccaatggtgcaagtgcccagctggccgccccgccaacgcag
gaccgctatgagacgctgcgcgaggtggcacccgggcgcgaggtgaccgctccagctgcc
gtggaggccaagaccaccgcggtcgaggcgacttccgtggaaccagaagtggtactgaga
cgctcgctgggtggctcagccacctcgctgtgcctgctgccctcggaggaaacttctggg
gaggagtctcgagccgggacagggcctcggaggagccgttctggggccctggggccgcca
gtttcagcgcctccgactctagctctggttccaggggcagcctcggcccggccgaggccg
cagcagcgctactccttcgacggggactacggggcactcttccagagccacagttacccg
cgccgcgcccggcggacaaagcgccaccggtccacgccacacctggacggggctcgaggg
ggcgcggccggggaggatggagacctagggctgggctctgccagggcgcgcctggccttt
accagcaccgagtggatgctggagagtaccgtgtga
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integrated database retrieval system
