| Entry |
|
|---|
| Symbol |
Helz
|
|---|
| Name |
(RefSeq) probable helicase with zinc finger domain
|
|---|
| KO |
| K25168 | helicase with zinc finger domain [EC:5.6.2.-] |
|
|---|
| Organism |
cpoc Cavia porcellus (domestic guinea pig)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cpoc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cpoc03019]
100713077 (Helz)
Messenger RNA biogenesis [BR:cpoc03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100713077 (Helz)
3'-5' decay
Other 3'-5' decay factors
100713077 (Helz)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1921 aa
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADLPGPCPLEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLREGLAKGEGAFRAMLCCMQLKGKLQRVSTILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVPSGYHVEDLEVGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQIWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTTKRWDSSSKTIVDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQSQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISNAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLDPGFFTHILLDEAAQAMECETIMPLALATKSTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFITLCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNSNKQQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAFTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRRSPIPYGLGHHPPV
SIGQPQTQHPEKDQHEQNRNGKSDTNNPGPEINKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPGVFYPNTKFPRKDNLNPRHINLPLPGPHAQYAIPSRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQPNQMPPQPNQVVQQQNQLNPQVQQPPPQLSPAYQAGPNSAFFHNAVSHQ
PQSPPAETVIPEQQPPPMLQEGHSPLRAIAQPGPLIASHLNNFIDENPPGLPIGEALERI
HGSVTLESLRQQQARLQQWNEHHAYLSQGGIPYPHHHPHLQHLPQPPMGLHQPPVRADWK
LPSSAEDEAETTFSRFQDLIRELSHRDQSETRERAEMPPPQSRLLQYRQVQARSPPAAPS
PPSSTDHSSPFSNFNDNSRDIEVANSPAFPQRLPPQILSSPFSLPSEHLATPPLKYLAPD
GAWTFANLQQNHLIGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSS
SLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEASTPQDSLPQCKELQDHGNPPPFSFSS
PESWGNTTSTASYQNIPCNGSSRTAQPRELIGKTPQRLVKGINVEDVTWLGVFWNDVPSM
ACAWDMSGRKRVSVHPQAVQAMAKGMKTGVDMTQKSNLGGVAQRARPESVKTTMAISGLG
S |
|---|
| NT seq |
5766 nt +upstreamnt +downstreamnt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgagtcattgaagaggcag
gactatgagatggccctcaagcattgtacagaggccctcctttctcttggccagtactcc
atggctgacctcccaggaccatgtccactggagattgaacgcatcaaaattgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgagagaaggactggccaagggtgagggtgcctttcgggccatgctttgc
tgcatgcagctgaaaggaaagctccaacgtgtatccaccatccttgccaagtctctgaca
ggagaatccctgaatgggatggtcacaaaagatttgacaagactaaaaacacttctcaca
gaaacagagacagcaactagtaatgtcccgtctggatatcacgtggaagacttagaagtg
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatacgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaaatggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcataaccccgacttgtctgttactgtcaacaccaaaaaatcgcatcagata
tggacttttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaagcagcagctagta
accacaaccaagcgctgggattcttcttctaagactattgtagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctgtctgctgaccag
ctatttacccagtctgttttagacaaatcattgaccaagaccaactatcagtcaaggttg
cacgacctcctttatattgaggagatagcccagtataaagaagtcagcaaattcaaccta
aaagtgcaattgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tatgcccaaaacggacaactttttggtcgttttaagcttactgagacactttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagttcct
aaagagaagttagtacagagccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagagtatatatttttacggatatccagggaatgctgtgaagaacttaat
cttcggcctgactgtgatacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcactagataggatcaaggacaatggtgtattgtttccagacatc
agtatgactcccactataccttggagtcccaacagacagtgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaagctgttctggccattaccactccactttccatccag
ctgccacctgtccttatcattggaccctatgggacgggcaaaacatttacactagctcaa
gctgtcaagcatatactgcagcagcaggaaactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttccgaaatcgctgggtcaagactgtccaccca
gttgtccaccagtactgtttgatctcaaacgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgggtggtggtagtgactctgaacacttcccagtacctctgt
cagttggatcttgaccccggtttttttacacacattctgttagatgaagctgctcaggcc
atggagtgtgaaactattatgcctctagcattagcaactaaaagtactcggattgttttg
gctggtgatcacatgcagctcagtccttttgtttacagtgaatttgccagggagagaaac
cttcacgtttcgttacttgatcgactttacgagcattaccctgctgaatttccatgtagg
atccttttgtgtgagaactaccgttcccatgaagctatcatcaattatacctctgagctt
ttttatgagggcaaactgatggccagtggaaagcaaccggcacacaaggatttctaccca
ctgactttctttacagcacgaggggaagatgtacaagaaaaaaacagcacagctttttat
aataatgctgaggtatttgaagttgtggaacgtgtagaagagttgagaaggaagtggcca
gtagcatgggggaagttagatgacggtagcattggtgtggtgactccatacgctgatcag
gtgttcaggatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaaacaattcagagtcttgtttcttagcacagtacgtacaaga
catacctgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattct
acggaagacttagattatggttttttatctaactacaagcttcttaatactgccatcaca
agagcacagtccctggtcgccgtagtgggagatcccattgccctgtgctccattggaaga
tgcaggaagttttgggagcgatttatcaccctgtgtcatgaaaataatagtctgcatggg
atcacatttgaacagatcaaggctcagttagaggctttagaactaaagaagacatatgtg
ttgaatccactggctcctgaatttatcccccgggctctgagactgcagcattccggaaac
agcaacaaacagcagcaatcaccacctaaggggaaaagcctccatcatacccaaaatgat
catttccagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatttactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagc
cctgttcagagaattgatcctcacactgggacaagtattctctatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaattattacacatcaggcagcaatggcctacaatatgaacctc
ttacagacacatggacggaggtctcctataccttatggccttggacatcacccacctgtc
agcatagggcaaccacagactcagcatcctgagaaggatcagcatgaacaaaatcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaa
aagcccacagaaccaaaacaggttgatttggaatcaaatccacagaatagaagtcctgaa
tcacgtcctggtgttttttatcccaataccaaatttcctcgcaaagataatctcaaccca
agacacataaatcttcctcttcctggtccccatgcacagtatgcaatccctagtcgtcat
ttccaccctcttccccagctgccacgaccaccatttccaattccacagcaacacaccttg
ctaaatcaacagcagaataatttgcctgaacaaccaaatcaaatgccaccacaaccaaat
caggtagtccagcagcaaaatcagttgaatccacaagtccagcagccacctcctcaactt
tctcctgcctatcaggcaggaccaaacagtgctttttttcataatgcagtttctcatcaa
ccacagtctcctcctgcagagactgtgattcctgaacagcagcctcctcctatgctgcaa
gaaggccatagtcctctgagagccattgcacagcctggtcctctcattgcttctcatctg
aataacttcattgatgagaaccccccaggattaccgataggagaggctttagagcgtata
catgggagtgtaactctggaatcattaaggcagcagcaagcgcgtctgcagcagtggaat
gaacaccatgcctatctcagtcagggtggtattccatatccacaccaccatcctcacctc
cagcatcttcctcagccgcccatgggactccatcagccgccagtgagggcggactggaag
ctccccagcagtgctgaggatgaagcagaaacaacattctcgaggtttcaagatttaatc
agagaactgtctcatcgtgatcagagtgaaactcgagaacgagctgaaatgccaccacct
cagtcaagacttttgcaatatagacaagttcaggcgagaagcccaccagcagccccatct
cccccatccagtacagaccacagtagccccttttctaactttaatgacaacagcagagac
attgaagtagccaacagcccagcatttccacagcgccttccacctcagatactcagctca
cctttctcgttgccatctgaacaccttgccactcctcccttgaagtacctggcacctgac
ggagcatggacttttgctaacctgcaacagaatcacttaatagggccaggatttccttat
ggcctacctccattgcctcacaggccaccacagaacccttttgtacaaatacaaaaccat
caacacgctattggtcaagagccatttcatccattgtcatctcgaacagtatcttcttct
tcgctccctagcttagaagagtatgagcccagaggacccggtcggcctttgtaccaaaga
agaatctcatctagctcagtgcagccttgttctgaagaagcaagcactcctcaagacagc
ctgcctcagtgtaaggagctgcaggaccatggcaaccctccacctttcagcttctcatcc
ccagagtcctgggggaacaccacctcaactgcctcctatcagaacattccgtgcaatgga
tccagcaggacagcccagcccagagaattgataggtaagactcctcagcgcctagtgaag
ggcattaatgtggaagatgtgacctggcttggggtgttttggaacgatgttccctcgatg
gcctgtgcctgggacatgagtggcagaaagagggtgagtgttcaccctcaggcagttcag
gcaatggcaaagggaatgaagacaggggtggatatgacccagaagtccaatctgggaggc
gtggctcagagagcaagaccagagtcagttaaaaccacgatggcaatttccggtttgggt
agctga |
|---|
