KEGG   Cavia porcellus (domestic guinea pig): 100713099
Entry
100713099         CDS       T07777                                 
Symbol
Rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03030  DNA replication
cpoc03410  Base excision repair
cpoc03420  Nucleotide excision repair
cpoc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100713099 (Rfc2)
   03410 Base excision repair
    100713099 (Rfc2)
   03420 Nucleotide excision repair
    100713099 (Rfc2)
   03430 Mismatch repair
    100713099 (Rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpoc03032]
    100713099 (Rfc2)
   03036 Chromosome and associated proteins [BR:cpoc03036]
    100713099 (Rfc2)
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100713099 (Rfc2)
DNA replication proteins [BR:cpoc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100713099 (Rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100713099 (Rfc2)
Chromosome and associated proteins [BR:cpoc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100713099 (Rfc2)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100713099 (Rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100713099 (Rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 AAA_14 AAA_16 AAA_lid_RFC1 Mg_chelatase Viral_helicase1 AAA_11 Rad17 RCF1-5-like_lid RuvB_N AAA_assoc_2 AAA_19 nSTAND3 MipZ AAA_24 AAA_5 ABC_tran AAA_18 AAA_28 DNAX_ATPase_lid AAA_25 AAA_30 AAA_23 MeaB NTPase_1 SLFN-g3_helicase FtsK_SpoIIIE RNA_helicase DUF815
Other DBs
NCBI-GeneID: 100713099
NCBI-ProteinID: XP_003469987
Ensembl: ENSCPOG00000012351
UniProt: H0VL88
LinkDB
Position
Unknown
AA seq 352 aa
MEVQTSSEGSREPGPQDAAPAPSKASGSASHYELPWVEKYRPIKLNEIVGNEDTVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPRGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQVLARLLSVIEKEAVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSG
FGFINSENVFKVCDEPHPLLVKEMIQHCVSANIDDAYKILAHLWHLGYSPEDIIGNVFRV
CKTFQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggaggttcagacgagttccgagggctcccgggagccagggccacaggacgccgcgcct
gctcccagcaaggcatcaggcagcgccagccactacgagctgccgtgggttgaaaaatac
aggcctataaagctgaatgaaattgttggaaatgaagacaccgtgagcaggctggaggtc
tttgcaagagaagggaatgtgcccaatatcatcattgctgggccccctggaaccggcaag
accaccagcatcctgtgcctggcccgagccctgctgggtcccgcgatgaaggatgcggtt
ctagagctcaacgcatccaatgacaggggcattgatgttgtgcggaacaaaatcaaaatg
ttcgcccagcagaaagtgacgcttcccagaggccggcacaagatcatcatcctggacgag
gctgacagcatgacagacggtgcccagcaggccctgcggaggaccatggagatctactcc
aagaccacccgctttgcactggcctgcaatgcctcggacaagatcatagagcccatccag
tcccgctgcgctgtgctgcgctacaccaagctcaccgatgcgcaagtgcttgcgcggctc
ctgagcgtcattgaaaaggaggctgtgccctacacagacgacggcctggaagccatcatc
ttcacggcacaaggcgacatgcggcaggcactgaacaacctgcagtccactttctcgggt
ttcggcttcatcaacagcgagaacgtgttcaaggtctgcgacgagccgcacccactgctg
gtgaaggagatgatccagcactgcgtgagtgccaacatcgatgacgcctataagatcctc
gcccacctgtggcacctgggctactcgccagaggacatcatcggcaacgtgttccgtgtg
tgtaagactttccagatggccgagtacctgaaactggagttcatcaaggagatcggctat
acccacatgcgtgtggcggaaggtgtgaactcccttctgcagatggcggggctgctggcc
aggctgtgtcagaagacgatggcgccggtggccagttag

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