Cavia porcellus (domestic guinea pig): 100713312
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Entry
100713312 CDS
T07777
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X2
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04360
Axon guidance
cpoc04724
Glutamatergic synapse
cpoc04726
Serotonergic synapse
cpoc04929
GnRH secretion
cpoc04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100713312 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
100713312 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
100713312 (Trpc1)
04726 Serotonergic synapse
100713312 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
100713312 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100713312 (Trpc1)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100713312 (Trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
100713312
NCBI-ProteinID:
XP_003476806
Ensembl:
ENSCPOG00000003198
UniProt:
A0A286Y324
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MRAQPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSSPNEVMALKDVREVKEE
NTLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAITITIENENLDILQLL
LDYGCQKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTL
CSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRND
YEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYN
QKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQLG
RIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWS
DIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLV
AEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQ
LYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEEL
QSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCT
LPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCC
LVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagggctcagcccccgtctcctggcctgcccccttcatgggccgcgatgatggcggcc
ctgtacccgagcactgacctctcgggcgtctcctcctcctccctgccttcctccccatcc
tcctcttcgtcaccgaacgaagtgatggcgctgaaggatgtgcgggaggtgaaggaggag
aacaccctcaatgagaagcttttcttgctggcgtgcgacaagggtgactattatatggtt
aaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtgctt
gggagaaatgccattaccataactattgaaaacgaaaacttggatatacttcagcttctt
ttggactacggttgtcagaaactaatggaacgaattcaaaatcctgaatattcaacaact
atggatgttgcacctgttattttagcagctcatcgtaacaactatgaaattcttacaatg
ctcttaaaacaggatgtgtctctacccaagcctcatgcagtaggctgtgaatgcacattg
tgttctgcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatat
cgatgtttggccagcccagctctaataatgttaactgaggaggatccaattctgagagca
tttgaacttagtgctgatttaaaagaactaagccttgtggaggtggaattcaggaatgat
tatgaagaactagctcgtcagtgtaaaatgtttgctaaagacttgcttgcccaagcccgg
aattcacgtgaattggaagttatcctaaaccatacatctagtgatgaacctcttgacaaa
cggggactactagaggaaagaatgaatttaagtcgtctaaaacttgctatcaaatataac
caaaaggagtttgtgtcccagtctaactgccagcagttcctgaacactgtgtggtttgga
cagatgtctggttaccgacgtaaacccacctgtaagaagataatgactgttttgacagtt
ggcattttctggccagttttatcactgtgttatctgatagctcctaaatctcaacttggc
agaatcattcatacaccttttatgaaatttattattcatggagcatcctatttcacattt
ttactgttactaaatctatactctctggtctacaatgaggataagaaaaacacaatgggg
ccagccctggaaagaatagactaccttcttattctgtggattattgggatgatttggtca
gacattaaaagactgtggtatgaaggtttggaagactttttagaagaatctcgaaatcaa
ctcagttttgtcatgaattccctttatttggcaacttttgctctcaaagtggttgctcac
aacaagtttcatgattttgctgatcggaaggactgggatgcatttcatcctacacttgtg
gcagaagggctttttgcatttgcaaatgttctgagttatcttcgactgttttttatgtat
acaaccagctctatcttggggcctttacagatttctatgggacagatgttacaagatttc
ggaaaatttcttggaatgtttcttcttgttttgttttctttcacaattggactgacacaa
ctctatgataaagggtatacaccaaaagagcagaaagactgtgtaggtatcttctgtgaa
cagcaaagcaatgacaccttccattcgttcattggcacttgctttgctttgttctggtat
attttctccttggcacatgtggcaatctttgttacaagatttagctatggagaagaattg
cagtccttcgttggagctgtcattgttggtacatacaatgttgtggttgtcatcgtgctt
acgaagcttctggtagcaatgctccataaaagctttcagttaatagcaaatcatgaagac
aaagaatggaaatttgctcgggcaaagctgtggcttagctactttgatgacaaatgtaca
ttacccccaccgtttaacatcattccttcaccgaagactatttgctatatgattagtagc
ctcagtaagtggatttgctctcatacttcaaaaggcaaggtcaaacggcagaacagttta
aaggaatggagaaatttgaagcaaaaaagagatgaaaactaccaaaaagtgatgtgctgc
ttagtacatcgttacttgacctccatgagacagaagatgcaaagtacagatcaagcaacc
gtggaaaatctaaacgaactacgccaagatttgtcaaaattccgaaacgaaataagggat
ttgcttggctttcggacttctaaatatgcaatgttttacccaagaaattaa
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