Cavia porcellus (domestic guinea pig): 100713322
Help
Entry
100713322 CDS
T07777
Symbol
Htt
Name
(RefSeq) huntingtin isoform X2
KO
K04533
huntingtin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc05016
Huntington disease
cpoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100713322 (Htt)
05022 Pathways of neurodegeneration - multiple diseases
100713322 (Htt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100713322 (Htt)
04131 Membrane trafficking [BR:
cpoc04131
]
100713322 (Htt)
03029 Mitochondrial biogenesis [BR:
cpoc03029
]
100713322 (Htt)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100713322 (Htt)
Membrane trafficking [BR:
cpoc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100713322 (Htt)
Mitochondrial biogenesis [BR:
cpoc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100713322 (Htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
DNA_pack_N
Motif
Other DBs
NCBI-GeneID:
100713322
NCBI-ProteinID:
XP_003461904
Ensembl:
ENSCPOG00000007218
UniProt:
A0A286XUY0
LinkDB
All DBs
Position
Unknown
AA seq
3119 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQAPPPQPSQPSPQAPPPQAHPPPPPPPAGLSGPEEPLPRP
KKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCGDDAESDVRMVAD
ECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVN
LLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTVRR
TAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEEEHPTLLILGVLLTLRYLVPLLQQQ
VKDTSLKGSFGVTQKEMEVSPSAEQLVQVYELTLHHTQHQDHNVVTGALELLQQLFRTPP
PVLLQALTTPGGLAQLSAAQDEARGRGRSESIVELLAGGGSCSPGLSRKQKGKVLLGEEE
ALEDDSESRSDTSSSAFAASVKGEISGELAAASGVSTPGSVGHDIITEQPRSQHTLQADS
VDLSSCDLTSAATDGDEEDILSHSSSQISAVPSDAAIDLNDGTQASSPISDSSQTTTEGP
DSAITPSDSSEIVLDGADSQYSGLQTGLPEDEDENEAEAESVPMPVPVPSGLPAGTSDAF
RNSSLSLQQAHLLESVGHSQQPSESSIDKFVSREEAAEPGDQENKPCRVKGDIGQSADDD
SAPLIYCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHPESFFSKLYKH
PLDTTEYPEEQYVSDVLNYIDHGDPQVRGATAILCGTLISSVLSRSRFHVGDWLGTIRML
TGNRFSLADCIPLLRKTLKDESSVTCKLACAAVRHCVMSLCSSSYSDLGLQLLVDLLALR
DSSYWLVRTELLETLAEMDFRLVSFLEAKSENLHRGAHHYTGLLKLQERVLSNVVISLLG
DEDPRVRHVAAASLVRLVPKLFYKCDQGQADPVVAVARDQSSVHLKLLMHETRPPSHFSV
STITRIYRGYSLLPSITDVTMENNLSRVIAAVSHELITATTRALTFGCCEALCLLSAAFP
VCVWSLGWHCGAPPLNISDESRKSCTVGMATVILTLLSSAWFPLDISAHQDALILAGNLL
AASAPKSLRSSWASEEEANPTATRQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHVLD
DVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPLSPKKGSEASTVSRQSDTSG
PVTASKLLSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQI
LELATLQDIGKCVEEILGYLKSCFSREPMMATLCVQQLLKTLFGTNLASQFDGLSSNSCK
SQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQTEQEHDNSGWFDVLQKV
SSQLKTNLTGATKNRTDKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQ
LRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGI
PKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELETQKEVVVSMLLR
LIQYHQVLEMFILVLQQCHKESEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTL
FEILAPSSLRPVDMLLRSMFVTPDTLASVSTVQLWISGILAILRVLISQSTEDIVLSRIQ
ELSFSPYLISCSVINRLRDGDSTSTAEEHNEGKQLKNSPEETFSRFLLQLVGILLEDIVT
KQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTSDACEGGFYTLES
LNARVRSMVPTHPALVLLWCQILLLVNHTDHRWWAEVQQTPKRHSLSCTKSLSPQLSSEK
EDSDSTAELGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIINHIQDLISLSHEPPVQ
DFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLL
GTPFRALSHRVDTLACRRVEMLLAANLQSSTAQLPVEELNRIQEHLQSSGLAQRHQRLYS
LLDRFRLSTVQDSLSPLPLITSHPLDGDGHVALETVSPDKDWYIRLVKSQCWTRSDSALL
EGAELVNCLPAEDMRVFMMSTEFNLSLLAPCLSLSLNEIAAGQKSPLFEVARGVTLDRMT
SIVQQLPAVHQVFQPFLPTKLTAYWSKLNDLFGDATLYQSLTTLARALAQYLVVVSKVPA
YLHLPPEKEKDMVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQQPSLWNVVSS
PEFVTHACSLIHCLRFILEAIAVQPGDQLLSPESRMSMQEDEVDADTRNPKYITTACEMV
AEMVESLQSVLALGHKRNSSVPAFLTAVLKNIVVSLARLPLVNSYTRVPPLVWKLGWSPK
PGGDFSTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVME
QEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRF
GRKLSIIRGIVEQEIQAMVSNRENIATHHSYQAWDPVPSLSPATTGTLISHDRLLLQINP
ERELGNMSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEEADAPVPASPPTSPVSSRKHR
AGVDIHSCSQFLLELYSRWLLPSSSARRTPVILISEVVRSLLVVSDLFTERNQFEMMYST
LTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSSHLPSQIGAL
HGTLYVLECDLLDDTAKQLIPVVSDYLLSSLKGAAHCVNVHSQQHVLVMCATAFYLIENY
PLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDAESLVKLS
VDRVNVHSPHRAMAALGLMLTCMYTGKEKASPGRTSDPNPAAPDSESVIVAMERVSVLFD
RIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTL
HSAGQSPMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSPWVSAILPHVISRMGKL
EQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGSPYHRLLTCLRNVHKVTTC
NT seq
9360 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggcctttgagtctctcaagtccttccagcagcag
caggcgccaccgcctcagccctctcagccgtcgcctcaggcgccgccgccccaggcacat
ccgcccccgcctccgcctcctgctggcctgtccgggcccgaggagccgctgccccgacca
aagaaggaactctcagccaccaagaaagaccgcgtcaatcattgtctgacgatatgtgaa
aacatagtggcacagtctctcagaaattctccagaatttcagaaactcctgggcatcgcc
atggaacttttcctgctgtgcggtgatgatgcggagtcagatgtcagaatggtggctgat
gaatgcctgaacaaagttatcaaagctttgatggattccaaccttccaaggctccagtta
gagctctacaaggaaattaagaagaatggtgcccctcgcagtttgcgtgctgccctgtgg
agatttgctgagctagctcatctggttcggcctcagaagtgtaggccttacctggtgaat
cttctgccctgcctaactcgaacgagcaagagacctgaggaatcggtccaggagaccttg
gctgcagctgttcccaaaattatggcttcttttggcaattttgcaaatgacaatgaaatt
aaggttctgctgaaggcattcatagcgaatctgaagtcaagctcgcctacggtccggcga
acggcagctggctcagcggtgagcatctgccagcactccaggaggacacagtacttttac
agctggctgctcaatgtgctgttaggtctgctggttcccgtggaagaagaacatcccaca
ctcttgatccttggagtgctgctcacactgaggtatctggtgcccttgctgcagcagcag
gtcaaggacacaagcctgaaaggcagctttggggtgactcagaaagaaatggaagtgtct
ccatctgcagagcagctggtccaggtttacgaactgaccttgcatcacacgcagcatcaa
gaccacaacgtagtgacaggtgctctggagctcttgcagcaactcttccgcacaccccca
cctgtgctcctgcaggcacttaccaccccagggggcctggctcagctctctgctgctcag
gatgaggcccgtggccgcggccgcagtgagagcatagtggagcttctagctggagggggt
tcttgcagtcctggcctttcaagaaaacaaaaagggaaagtgctcttaggagaggaggaa
gccttggaggatgactctgaatcgaggtcagacaccagcagctcggcctttgcagcctct
gtgaagggggagatcagtggagagctggccgctgcctcgggggtctccacacctgggtct
gtggggcatgacatcatcactgaacagccccggtcacagcacactctgcaggcagactct
gtggatctctccagctgtgatttgaccagtgctgccaccgatggggatgaagaagacatc
ttgagccacagttccagccaaatcagtgctgtgccgtctgacgctgccatagacctgaac
gatggaacccaggcctcctcacccatcagtgacagctcccagaccactactgaagggcct
gattcagccataaccccttctgacagctctgaaatagtgttagacggtgctgacagccag
tattcaggcctgcagactggcctcccagaggacgaggacgagaatgaagctgaggctgag
tccgtgcctatgcctgtgcctgtgccgagcggccttcctgctgggacttcagatgctttc
aggaactcttccctgtcccttcagcaagcacatttattggagagtgtgggtcacagccag
cagccttctgagagcagtatagataagtttgtatcaagagaggaagctgctgaaccaggc
gatcaagagaacaagccttgccgagtgaaaggtgacataggacagtctgctgatgacgat
tctgctcctttgatttattgtgtccgcctgttatctgcttcatttttgctaactggggaa
aaaaatgtgctggttccagacagggatgtgcgggtcagtgtgaaggccctagcccttagc
tgtgttggggcagctgtggccctgcatccagaatctttcttcagcaaactgtataaacac
cccctggacaccacggaataccccgaggagcagtatgtctctgacgtcttaaactatatc
gaccatggagacccacaggtccgaggagccactgctattctctgtgggactctcatctcc
tctgtcctcagtaggtcccgcttccacgtgggggactggctgggtaccattaggatgctg
acaggaaatagattttctctagcagattgcattccactgctacggaaaacattaaaggat
gaatcttctgtgacatgcaagttggcttgtgcagctgtgcggcactgtgtcatgagtctt
tgcagcagcagctacagcgacttgggactgcagctactggtggacctactggccctgagg
gatagctcctactggctggtgaggacagagctcctggagacgctggcggagatggacttc
aggttggtgagctttttggaagcaaaatcagagaacttacacagaggagctcatcattat
acagggcttttaaagctacaagagcgagtgctcagtaatgttgtcatctccttgctgggg
gatgaagatcccagggtgcgacacgttgcggcagcatcgttagtgaggcttgtcccgaag
ctgttttataaatgtgaccaaggacaggctgatccagtagtggctgtggcaagagatcaa
agcagtgttcacctgaagctgctcatgcatgagacgcggcctccctcgcacttctccgtc
agcacgattaccagaatctatagagggtatagtttactaccaagtataacagacgtcacc
atggaaaataacctctcaagagttatcgccgccgtttcacatgaattgatcacggccacc
acacgtgcactcacatttggatgctgtgaagctttgtgtcttctttcagccgcctttcct
gtttgtgtgtggagcttaggttggcactgtggagcacccccgctgaacatttctgatgag
tccaggaagagctgcaccgttgggatggccactgtgattcttaccctgctctcctcagct
tggttcccgctcgacatctctgcccatcaggacgccttgatcttggcgggaaacttgctc
gcagcaagtgcccccaaatctctgagaagttcatgggcctctgaagaagaagccaacccc
acagcaaccagacaagaggaagtgtggcctgctctgggggaccggaccctggtgcccatg
gtggagcagctcttctctcacttgctgaaggtgatcaacatctgtgcccatgtcctggac
gatgtggctcctgggccagcaatcaaggcagctttgccttctctgacaaacccaccttca
ctaagtcccatccggcgcaagggcaaggagaaggaacccggagaacaagcctctgcacca
ctgagccctaagaagggcagcgaggcaagcacagtttcccgacaatccgatacctcaggg
ccagtaacagccagtaaattattgtcactggggagtttctaccatcttccttcatacctc
aagttgcatgacgtcctgaaggctactcatgccaactacaaggtcaccttggatcttcag
aacagcactgaaaagtttggggggttcctgcgctctgccttggacgttctctcccagatt
ctagagctggcgacactgcaggacattgggaagtgtgttgaagagatcctgggctacctg
aagtcctgctttagtcgggaaccgatgatggctactctttgcgtgcagcagcttttgaag
actctctttgggacaaacctagcctcccagtttgatggcttatcttctaactcctgcaag
tcgcaaggccgagcacagcgtcttggctcttctagtgtgaggccgggcctatatcactac
tgcttcatggccccctacacccactttacgcaggcccttgcggatgccagcctgaggaac
atggtgcagacggagcaggagcacgacaactcggggtggtttgatgtgctccagaaggtg
tcctcccagcttaagacaaacctcacaggtgccaccaagaaccgcacagacaagaatgct
attcacaaccacattcgtttatttgagcctcttgtcataaaagctttgaaacagtacacc
acgacaacctccgtgcagttgcagaagcaggttttggatttgctggcgcagctggttcag
ttacgggtgaattactgtcttctggattcagatcaggtgttcatcggatttgtgctcaag
cagtttgaatacattgaagtgggccagttcagggaatcagaggcaattattccaaacatc
tttttcttcctggtattactgtcttatgaacgataccattcaaagcagatcattggaatt
cctaaaatcatccagctgtgcgatggcatcatggccagtgggaggaaggctgtgacacac
gcaatcccagctctgcagcccatagtccatgacctttttgtgttaagaggagcaaataaa
gctgatgcggggaaggagcttgaaacccagaaggaggtggtggtgtcaatgctgttgaga
ctcatccagtaccatcaggtgctggagatgttcatcctcgtcctacagcagtgccacaag
gagagtgaggacaagtggaaacggctttctcgacaagttgctgacatcatcctgcccatg
cttgccaagcagcagatgcatattgactctcatgaagccctcggagtgctgaacaccttg
tttgagattctggccccttcctccctccgcccagtggacatgcttctgcgcagtatgttc
gtcactccagacacactggcatctgtgagcactgttcagctgtggatatctggaatccta
gccattctgagggttctgatttcccagtcaactgaagatattgttctctctcgcattcag
gagctctccttctcgccctatttaatctcctgttcagtgattaacaggttgagagatggg
gacagtacttccacagcagaagaacacaatgaagggaaacaattgaagaattcaccagaa
gaaacattctcgaggtttctgttacaactggttgggatccttttagaggacattgttaca
aagcagctgaaagtggaaatgagtgaacaacagcatactttctactgccaggagctcggc
acgctgctcatgtgcctcatccacatcttcaagtcggggatgttccggaggatcactgcg
gctgccaccagactcttcaccagtgatgcctgtgagggcggcttctacacgctggagagc
ctgaacgcacgtgtgcgctccatggtgcctacacacccggccctggtgctgttgtggtgc
cagatcctgctgcttgtcaaccacaccgaccaccgctggtgggcagaggtgcagcagaca
cccaagagacacagtctgtcgtgcacgaagtcactcagcccccaattgtccagtgagaag
gaggactctgattcaacagctgaacttggaatgtgcaatagagaaattgtgcgaagaggg
gccctcattctcttctgtgactatgtttgtcagaacctgcatgactccgagcacctaaca
tggcttatcataaaccacattcaggatctgatcagtctttcccatgagcctccagtgcag
gacttcatcagtgctgtccatcggaattctgccgccagtggccttttcatccaggcaatt
cagtctcgttgtgaaaatctttccactccaaccactctaaagaagacgctacaatgcttg
gaaggcatccacctcagccagtcgggcgctgtactcacactctatgtggacaggctcctg
ggcacccccttccgggcactatctcacagggtcgacaccctggcctgtcgccgggtagaa
atgttgctggctgcaaacttacagagcagcacggcccagttgccagtggaagagctcaac
agaattcaggagcacctgcagagcagtgggcttgcacagagacaccagaggctttattcc
ctgctggacaggttccgtctttccacagtacaagactcactcagccccttacccctgatt
acctcccacccactggatggggatgggcatgtggccctggaaacagtgagcccagacaaa
gactggtacatccgcctcgtcaaatcccagtgttggaccaggtcagattctgcgctgctg
gaaggtgcagagctggtgaattgcctccctgccgaggacatgcgtgttttcatgatgagc
acggagttcaacctaagcctactggctccgtgcttaagcctcagcctgaatgaaattgca
gctggccagaagagccctctttttgaagtggcccgtggggtgactctggaccgcatgact
agcattgttcagcagcttcctgctgtccatcaggtcttccagcccttcctgcccacaaag
ctgacagcctattggagcaagttgaacgatctctttggggatgccacgttgtaccagtcc
ctcaccacactggcccgggccctggcacagtacctggtggtggtgtccaaagtgcctgcc
tatttgcaccttcctcctgagaaggaaaaagacatggtgaagtttgtggtgatgacccta
gaggccctgtcatggcatttgattcacgagcaaatcccactgagtctggacctgcaggct
gggctggactgctgctgcctggctctgcagcagcccagtctctggaatgtggtctcctcc
cctgagtttgtgacccacgcctgttccctcatccactgcctgcgattcatcttggaagcc
attgcagtgcagcctggagaccagcttctcagtccagaaagccggatgagcatgcaagag
gatgaagtagatgcagacacacgaaatcccaagtatatcaccacggcctgcgagatggtg
gcagagatggtggagtccctgcaatctgtgctggccttgggccacaagaggaacagcagc
gtgcctgcatttctcactgcggtgctcaagaatattgtggtcagtctcgctcgcctgccg
ctcgtcaacagctacacgcgagtaccacccctggtgtggaaacttgggtggtcccccaag
ccaggaggggacttcagcactgtgttccccgagattcctgtggaattcctgcaggagaag
gaagtcttcaaggagttcatttaccgcatcaatacgctagggtggaccagtcgtacccag
tttgaggaaacctgggccacccttcttggtgtcctggtgacccagccccttgtgatggag
caggaggagagcccacccgaggaggacacggagaggacccagatccacgtgctagccgtc
caggccatcacctccctggtgctcagcgccatgactgtgcctgttgctggcaacccagca
gtgagctgtctagagcagcagccccggaacaagcccctcaaagctcttgataccaggttt
gggagaaaattgagcataattagagggattgtagagcaggagattcaagcgatggtttcc
aaccgggagaatattgccacccatcactcataccaggcgtgggatcctgtcccttctctg
tcacctgccactacaggcaccctcatcagtcatgacaggctgctgctgcagatcaaccct
gagcgggagctgggcaacatgagctacaagctgggccaggtgtccattcactctgtgtgg
ctggggaacagcattaccccgctgagagaagaggagtgggatgaggaagaggaggaggaa
gcagacgcccctgtgcctgcgtccccgcccacatctccagtcagctccaggaaacatcga
gccggagtcgacatccactcctgttcacaatttctgctcgagttgtacagccgctggctc
ctgccttccagctcagccagaaggaccccggtcatcctgatcagcgaagtggttcgctct
cttctcgtcgtctcagacttgttcactgagcgcaaccagttcgagatgatgtattcaacc
ctgacagaactgcggcgggtacacccttcagaggatgagattctcatccagtacctggtg
ccagccacctgtaaggcggctgctgtcctgggaatggacaaggctgttgcggagcctgtt
agccgcctgctggagagcaccctcaggagcagtcacctgcccagccagattggagccctg
cacggcaccctgtacgtgctggagtgcgacctcctggacgacaccgccaagcagctgatc
ccagttgtcagtgactacctcctgtcaagcctcaagggggcagcccactgtgtaaacgtg
cacagccagcagcatgtgctggtgatgtgtgccaccgctttctatctcattgagaactat
cccctggatgtggggccagagttttcagcatcaataatacagatgtgtggggtgatgctg
tctggcagtgaggagtccactccctcgatcatctatcactgcgcactccgaggtctggag
cgcctcctgctctccgagcagctttcccgactggatgcagagtcccttgtcaaactgagt
gtggacagagtgaacgtgcacagcccacaccgggccatggctgctttaggcctgatgctt
acctgcatgtacacggggaaggagaaagccagtccaggcagaacctcggatcctaaccct
gcagctcccgacagcgagtctgtgatcgttgccatggaacgggtatctgtcctctttgat
aggatcaggaagggcttcccctgtgaagcccgggtggtggcgaggatcctgccccagttc
ctggacgacttcttcccaccccaggacgtcatgaacaaggtcattggagagtttctgtcc
aaccagcagccatacccacagttcatggccactgttgtgtacaaggtgttccagactctg
cacagtgccggacagtcgcccatggtccgggactgggtcatgctgtccctgtccaacttc
acacagaggaccccggttgccatggccatgtggagcctctcctgcttttttgtcagcgca
tccaccagcccctgggtgtcagccatccttccacatgtcatcagccggatgggcaagctg
gagcaggtggacgtgaatcttttctgcctggtcgccacagacttctacagacatcagata
gaggaggagcttgaccgcagggcctttcagtctgtgtttgaggtggtcgcggcaccagga
agcccataccaccggctactgacttgtttgcgaaatgtccacaaggtcaccacttgctaa
DBGET
integrated database retrieval system
