Cavia porcellus (domestic guinea pig): 100713353 Help Entry 100713353         CDS       T07777                                  Symbol Rttn Name (RefSeq) rotatin   KO K16484   rotatin Organism cpoc  Cavia porcellus (domestic guinea pig) Brite KEGG Orthology (KO) [BR:cpoc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cpoc03037]     100713353 (Rttn) Cilium and associated proteins [BR:cpoc03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100713353 (Rttn) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Motif Other DBs NCBI-GeneID:  100713353 NCBI-ProteinID:  XP_003466568 Ensembl:  ENSCPOG00000002661 LinkDB All DBs Position Unknown AA seq 2228 aa AA seqDB search MVLAGLIRKLGHRLTEIRERALRSILCKMDLSLVCPADLIQERLLFVHLLEWFNFPSVPM KEEVLKLLNRLVKYPAAVQHLTDLGAVEFFSKLRPNVEPVLQAEIDGILDGLFVLPSEVP AVYSVTYHQSNQTELSQPEILTGYFPQHKSNFQQMKVPPKPAVNQTVKCLKFSTFPWLPL TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA FEGDGKHRLALQSVSCLQQLCTYLRNRLNFHRDPHFFSNRQDTISQNSSMSYCHETRGTH HSQNLSPGSSSPRPSVIGRTGQRPRGDGQDWDAVSSSGSSGHAHVNSRISVHSPLDVGHI DLPELETEDTLELQFQQLSLPQFCVSVLESAVPLLSTGSRQMIIRVLELLAEDMILIDEA ISANIWDDSSLFAIDMKEKLLLVLGSLGETMCYHKSRVGLEQPEVMLVHHRMAFVSISLF AVRLLQILLPVEKASEFLPEPMSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSI YKRTAEAVYSIACACNFLSDIGKEGEKNLLELLELADQALHSFSYHQHFPLIKEIIFICS KIWKSAQASPLVQGESHKVLLHMLSHPLPQVKIETYRSCLEVVKECLGVHNVTVPVSSLC NGIHFLLHPKVLYEISTFGIQEPRNEVNAAAKAILLYLLQGRLMMTALTWNKFIESLSPV LPVLQGYADPEDPLGNSILLLSEASSKAGEEILPCMTRLKFVLRLLLVKKPSVRSLALKL LTSHLTSEGADTKHPFIDASLLSRVTNLFIVKKPIELKLDDRKELVIKLETVEKVYEVFT SDDVDLSLRKSAAEQLAVIMQDIKMHAVVKKLCLTDKIIEYLNECVSQDGKVVECLIQPS LTLLRKVLCADPLLRLSLSQQSSLLILLFRVSLIFHEDSTTVTEVGALFCLLLFDEVSRM DMWSINPSSKPSVTSGFSLPVSVFRRYHLPVHVDGHHAVSPYSVVLALSADCLALKPVSD MLRIAWNLSWYHGSDNLLKEMNSETKIQEFSDTLKLSTVDIFTLKITHTASGLQDCFHSI LHAAAHRDVRAAVTRMSFYLLNDKLSLKGDSSPCGVTLKSLGWHNALNRFLQVLPACTED EKLLIDIVHFLKTLMKEQARSPPVELLSWILELLLRHNPNPLLDLLVLTESQTPEETDDI RTAVRQQLQKELISLFNTLLLCFKAVTDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFYG LPSLERTLRGMAHLTAFPGWSSHSPSTKPLEICMKYLSGLLEVITSFYVERGGNAMSFMG KGVTKSTVLCLLHLSHEMMAHAKSLEWMSLWFLPLGSHSEEHGPAQQGLAWLIPLWVDRD PEVRFTSLGLGSALTMLEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIL QNLLVIPMPSVIMKDFTWQGPCVHDEDSGLSLTGQPALQALLYHCHFYEHLNQMVKHCYL GQYMFDLRISAFGGTSEANDLNSLDDSFKFWRAPSRMSNQDQDPSSLSTSETTVTPSVRS AEFQPLVPSTVILSEALHDQVLAQGQHEITSSQPHPDSSLSAPLPKQCVFVTPCLLSAIC SLLDNLLVIVPQDTANALQRAQLVELLCSIVDCTLLETCVRELKTPLPPLPPVEHTRAHV SFLLEYLSSLSRLLQSCVLVDRNLVIQEELLKSLINSIIGVLTMYTNDVLDVELMSAFYH TWTHLLDLLVTLLRKAATFSLPFITSAVAKRWTAVVEMFCKCVGLSVRCPALCTASLQFL ALLLTEEAKLHLQDKDKTSLDRSPMMVLLLDEIRDNQKSSEQLNEIILQCYEGKSSKDVL KRVAANALMSLLAVSRRAQTHALKADLIDSCVEHMKCINAQLNLDSLRPGKAALKKKEDG FTKELSVTMQLLRNCLYQNEECKEAALGAQLVPVLHSLWPWLLMDDSLMQIALQLLCVYT ANFPNGCSSICWSSYGQYPVQAVHRGIPSNSMMLCILKLASQIPAENTALQQVVFMFLSN LALSHDCKGVIQKSNFLQNFLSLSLPKGGNKHLSNLTVLWLKLLLNLSFAEDGQQMILRL DGCLDLLTEISKYKHKSSPYIPLLIFHNICFSPANKPKILANEKVIATLAACLENENQNA QKIGAAALWALVYNYQKAKPTLKNPSIKRRVDEAYCLAKKTISNAEENPLNAYYLKCLEN LVQLLTSS NT seq 6687 nt NT seq  +upstreamnt  +downstreamnt atggttttggccgggctcatcaggaaactgggtcaccggctgactgagatccgggagcgc gcgctccggagtattctctgcaagatggatcttagcttagtttgccctgctgacctcatt caggaaaggctgctttttgtccacctgctggaatggttcaatttcccatccgtcccaatg aaagaggaggttctcaagctgttgaacagattggttaagtatcctgcagcagtccagcat ttgactgaccttggtgctgtagagttcttttctaagcttaggcctaacgtggaaccagtt ctacaggctgaaattgatggcattttggatggactttttgttcttccttcagaagttcct gcagtgtattctgtcacttaccaccaaagcaatcagactgagttgtcacaacctgaaatc ttaacaggatactttccccaacataaaagtaattttcagcaaatgaaagtgcctcctaaa ccagccgtaaatcaaactgtgaagtgtttgaagttttctacatttccttggttacctcta acaactacagacagacatgttctctcctctaatgaaagctctttaaggagtagtaatcac actttgatatggaacacctgtgaactattgaaggatgttattatgcaagattttcctgct gagatttttctgcaaaggccaaaaattgttcagagcctgttgtctctgttgaaactggcc tttgaaggagatggaaagcatcgcctggctctgcagtctgtgtcttgcttgcagcagctg tgtacatatttaagaaatagacttaactttcaccgagatccacattttttctctaataga caagatacaatttcccaaaattcttctatgtcttactgtcatgaaacaagaggtactcat cattctcagaatctgtccccaggaagcagcagccctcggccttctgttattgggcgcaca ggccagcgacccagaggagatggccaggattgggatgcagtgtcctctagtggcagtagt ggtcatgcccacgtgaactctaggatatctgtccattcgcctttggatgtggggcacata gatctgccagagttggaaactgaagacactttggaactacaattccagcagctcagtctt ccccagttctgtgtctctgttctggaatccgcagttcctctcttaagtacaggtagtaga caaatgataataagagttttggaattgcttgcagaagatatgatactaattgatgaagca atttcagctaatatttgggatgacagcagcctttttgctatagatatgaaggagaaactg ctactggtgttggggtctcttggagaaaccatgtgttaccataaaagccgtgttggtttg gaacaaccagaggtaatgctagtgcaccacagaatggcatttgtcagcatttctctgttt gcggttcgactgttacaaatacttctccctgttgaaaaggccagtgagtttttaccagag ccaatgtcaacagcattatttctactttctttggacatgcctatttctttggaatatcca aatatccatgaagctgtggtggcctatttggaacagctgaattctgaaaactacagtatt tataaacgaactgcagaggctgtttattcaattgcatgtgcctgtaacttcctgtctgac attggtaaagagggagagaagaatcttctagaactactggagcttgcagatcaagccttg catagcttttcctatcatcagcattttcccctaataaaagaaatcatcttcatttgttca aagatctggaaatcggcccaggccagtccattagtacaaggagaaagtcacaaggtactt ctgcatatgttatctcacccattgccacaagtgaaaattgaaacttaccggagctgtctg gaagttgttaaggaatgtttaggtgttcataatgtcactgtacccgtgtcttccctttgt aatggaattcatttcctacttcacccaaaagtcctgtatgaaatctccacatttggtatc caagaacccagaaatgaggtgaatgctgctgccaaggccattctgctgtatctgcttcag ggccgactgatgatgacagcgctgacctggaacaagtttattgagtctctgtctcctgtc cttccagtactgcagggctatgctgatcctgaagaccctttgggtaactccattcttctt ttaagtgaggcaagttctaaggcaggagaagagattcttccctgtatgactcggttaaag ttcgtgctgcgacttttgctagtgaaaaagccatcggtccgttcactagcattaaagctt ttaacatctcatcttacaagtgaaggggctgatacaaagcaccctttcatagatgccagc cttctctccagagttactaatttatttattgtgaaaaaacctattgaactcaaattggat gacagaaaagaactggttattaagttggagactgttgaaaaggtatatgaagtcttcacc tcagatgatgttgacctttctttgagaaagtcagctgcagaacagttagctgtgattatg caagatattaaaatgcatgctgtggtgaaaaagttatgcttaactgacaagataattgaa tatttaaatgaatgtgtgagtcaagatggcaaggttgtggaatgtttgattcagccgagc ctcacgctcttgaggaaggttttatgtgctgatccactcttgcgtctttccctctcacaa cagtcttctctcttgatcctgttattcagagtttccttgatatttcatgaagattctact acagtgactgaagtcggagcactgttttgtcttctgttgtttgatgaagtatcaagaatg gatatgtggtctattaacccttccagtaaaccttctgtgacatcaggcttcagtttgcct gtttcagtttttagaaggtatcatctaccagtgcatgtagatggccaccatgctgtgagc ccttattcagtagttttggctttgtctgctgattgtttggctttgaagcctgtgtcagat atgctgagaatagcatggaacttgtcatggtatcacgggagtgataatctattgaaggaa atgaactctgaaactaaaatccaagaattttcagatacactgaaactctccacagtggac atcttcactctgaagataacacacacagcaagtgggctgcaggactgctttcactctatt cttcacgctgccgcccacagggatgttagggctgctgtcactaggatgagtttttatctt ctgaatgacaaactgtctttaaagggtgatagcagcccatgtggggttaccttgaagtcc ttgggttggcacaatgcactaaacagatttttacaggtacttcctgcttgcactgaagat gagaaactgctaatagatattgtacattttttaaagacgttaatgaaagaacaagctaga agtccaccagttgaacttctaagttggattctggaattactccttagacataatccaaac ccactcttagacctgctggttctgacagagtcacaaacaccagaagaaactgatgacatc cggacagctgtgagacaacaactgcagaaagaactgatttctctcttcaataccttgctg ctctgtttcaaggcagttactgacaggaaatgcttggaacttttttacgtcttccaaaca cagctgagtctgaaactgctccagtgtttgagggtcacagatgctcctcatttttatggc ctgccttccctggagcggactctgagagggatggctcacctcactgcatttccaggatgg agctcacactctccttccacaaagccacttgaaatttgcatgaagtatttgtcaggtctt ctggaggtcattacttctttttacgtggagcgtggaggaaacgctatgtcgtttatggga aaaggtgttacaaagagcacggttctttgcttgcttcacttatcccatgagatgatggcc catgctaagagcttggagtggatgtctctctggtttttgcccttgggtagtcatagtgaa gaacatggtcctgctcaacaaggattggcttggctgattcccttgtgggttgatcgggac ccagaggtgagatttacttccctaggcttgggatcagcactgaccatgcttgaagctggc tgtgtggccttggcaaacagttgtcagaacatttccggtgggctctggggaactgtcgtg aacattctcctggaccagtcagaatgtagcatggtgcgtcgtgaggctgcatttattctt caaaatctccttgtaattccaatgccttcagtaattatgaaggattttacttggcagggc ccctgtgtccatgatgaggattctggcctgtcactcacaggacaacctgccctccaggca cttttgtaccactgccatttttatgaacatttgaatcagatggtaaaacattgttaccta ggacagtatatgtttgacttaaggatttctgcttttggtggaacttcagaagccaatgat ttaaatagtttagatgactcattcaagttttggagggctccatcaaggatgtccaaccaa gatcaggatccaagttctctttccacctcagaaacaactgtgacaccttcagtgaggagt gctgaatttcaaccacttgtgccatcaacagtgatcctctccgaagccttacatgaccag gttttggcccaaggtcagcatgaaattacatcatcacagcctcatcctgattcatcccta tctgctccgctgcccaaacagtgtgtttttgttactccatgtcttctttcagcaatctgt agcctcctggacaacctattggtgattgtgccacaagacactgcaaatgctctccaacga gcccagctcgtagagctcctctgtagcattgtagattgtaccctcttagagacatgtgtc cgcgaactcaagacccccctgcctccactacctccagtggagcatactcgggctcatgtt tcctttctcctggaatatctatcatctttgtccaggcttctgcagtcctgtgtattagta gatcgtaaccttgtgattcaggaagagcttctgaaatcgcttatcaatagtatcattgga gttctcaccatgtacaccaacgatgtcttagatgtagagttaatgtcggctttttatcac acatggacacacttactcgaccttctggtcacactcctgagaaaagctgctactttctct ctccctttcattacgtcagctgtggccaagcgctggacggcagtggttgagatgttctgc aagtgtgtgggattatcagtcaggtgtcctgctctttgcactgccagtctgcagttccta gctcttcttctgacggaggaagcaaaattacatcttcaggacaaggacaagacgagttta gaccgtagtccaatgatggttttgcttcttgatgaaatccgggataatcagaaatcatca gaacaacttaatgaaataattcttcagtgttatgaaggaaaatcctccaaagatgtcctg aaaagagttgctgcaaatgcattaatgtcccttctggcagtgagcagaagagcacagacg catgctttgaaagctgacctcatagacagctgtgtggaacacatgaagtgtatcaatgca cagctgaaccttgattcgttaaggcctgggaaggcagcactgaaaaagaaggaggatggt tttactaaagagttaagcgtcactatgcagctcctaagaaactgtctttatcaaaacgaa gaatgtaaagaagcagctcttggagctcagcttgtccctgtcttgcattctctctggccc tggctattaatggatgattcattgatgcagattgccttgcagctactttgtgtctatact gcaaattttccaaacggctgcagttctatttgttggtcaagttatggacaatatcctgtt caagctgtgcacagaggaatccccagcaactctatgatgttgtgtatcctgaagctggct tctcagatccctgctgagaacactgctttacagcaggtggtttttatgtttctttcaaat ctggccttgtctcatgactgtaagggagtaattcaaaagagcaatttcttacagaatttt ctgtctctgtcattgccaaaaggaggaaataaacatctcagtaatctgacagttctttgg ttgaagttactgctaaatttgtcatttgcagaagatgggcaacaaatgatactgaggctg gatggctgtttagacttacttacagagataagcaaatataagcataagagcagcccttat atacctcttcttatttttcataatatttgcttcagtcctgctaataagcctaaaatcctg gctaatgaaaaggtcattgctacactagctgcctgtctggaaaatgagaatcaaaatgct cagaagattggagcagctgcactttgggctctagtttacaattatcagaaggcaaaacca actttgaaaaatccatcaataaaaagaagagtggatgaagcatactgtttagcaaagaaa actatctcaaatgcagaagaaaaccctctaaatgcatactacctgaaatgtcttgaaaac cttgtgcagctgctcacctcttcctga

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