Cavia porcellus (domestic guinea pig): 100713384
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Entry
100713384 CDS
T07777
Symbol
Npas3
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100713384 (Npas3)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100713384 (Npas3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
100713384
NCBI-ProteinID:
XP_023421650
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MHTAILQIHAQTISTRAVKSIKQYKHQALPFTSVAIISPFGPLDLPVARGAGGGAFLVHQ
LAHRKVSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISY
LKMRDFANQGDPPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFV
FALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLS
QGTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSG
YKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLN
IIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKN
GGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETS
DSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGSGCDNDMNCNDDGHSSSN
PDSRDSDDSFEHSDFENPKAAEDGFSALGPMQIKVERYVESESDLRLQNCESLTSDSAKD
SDSAGEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGGLDAGLVEPPRLLSSPHS
ASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQGGAGSGG
LHVAIPDSVPHPPGADGAAARKTQFGSSAASALAPVASDPLSPPLSASPRDKHPGGGGAG
GGGGGGPSAANSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRY
APAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSA
ASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgccatcctccaaatacatgcccagaccatcagcaccagggctgtgaagtca
atcaaacaatacaagcatcaagctcttccattcacttcagttgctatcatctcacccttt
ggtcctctggatctgccagttgctcgtggtgctggtggtggggcttttcttgtgcaccag
ttggctcacaggaaggtgagtttacaagcattgagaaaggagaagtctcgagacgctgct
cgttcccgccggggaaaagaaaattttgagttctatgaattggccaagttgttgcctctc
cctgcagccatcaccagccagctggacaaggcatccatcattcgacttacaattagctat
ctgaaaatgcgggactttgctaatcagggagaccctccgtggaacttgcgaatggaaggc
cctccacccaacacatcagtaaaaggtgcacaacgaaggagaagccccagcgcactagcc
attgaagtatttgaagcacatttgggaagtcacattttgcagtccctggatggctttgta
tttgcactaaatcaagaaggaaaatttttgtacatttctgaaacggtctccatctaccta
ggcctctcacaagtagagctgacaggcagcagcgtctttgactatgtccaccctggggac
cacgtggagatggcagagcagctgggcatgaagctcccacctgggcggggtctcctctca
cagggcaccgcagaggatggagccagctcagcatcttcttcctctcagtcagaaacccct
gagccagtggagtcaaccagccccagtctgctaaccactgacaacactcttgagcgttcc
tttttcatccgaatgaaatctaccctgaccaaacgaggtgtgcacatcaaatcatcagga
tataaggtgattcacataacaggccggctacgcctgagagtatcgctgtcccacgggagg
accgtccccagccaaatcatgggtcttgtggtggtggctcatgccttgcctcctcctacg
atcaatgaagtcagaattgactgccatatgttcgtcactcgagtaaatatggacctcaat
atcatttactgtgaaaatagaattagtgattacatggatttgacccctgtagacatcgta
gggaaaagatgctaccacttcatccatgccgaagatgtagaggggatcaggcatagtcac
ctggacctgctgaataagggtcagtgtgtgacgaagtactatcgctggatgcagaagaac
ggaggctacatttggatacagtctagtgccaccatagctattaatgccaagaatgccaat
gaaaagaacatcatctgggtgaattatcttcttagcaatcccgagtacaaagacacaccc
atggacatcgcacagctcccccacctgccagagaaaacttcggaatcctccgagacatcc
gactctgagtcagattctaaagacacctcaggtattacagaggacaacgagaactccaag
tcggacgagaaggggaatcagtcggagaacagcgaagacccggagcccgaccgcaagaag
tcgggcagcgggtgcgacaacgacatgaactgcaacgacgacggccacagctccagcaac
ccggacagccgcgacagcgacgacagcttcgagcactcggactttgagaaccccaaggcg
gcggaggacggcttcagcgcgctggggcccatgcagatcaaggtggagcgctacgtggag
agcgagtcggacctgcggctgcagaactgcgagtcgctcacgtccgacagcgccaaggac
tcggacagcgcgggcgaggcgggcgcgcaggcctccagcaagcaccagaagcgcaagaag
cggcggaaacggcagaagggcggcagcgccagccgccggcgcctgtccagcgcgtcgagc
cccggcggcctggacgccggcctggtggagcccccgcggctgctgtcctccccgcacagt
gcctcggtgctcaagatcaagacggagatctcggaacccatcaacttcgacaacgacagc
agcatctggaactacccgcccaaccgggagatctccaggaacgagtccccctacagcatg
accaagccgcccagctccgagcacttcccgtccccgcaggggggcgcgggcagcggcggg
ctgcacgtggccatcccggactcggtgcctcacccccccggcgccgacggcgcggccgcc
cgcaagacccagttcggctcctcggccgcctcggccttggcccccgtcgcctccgaccct
ctgtcgcccccgctgtcggcgtccccgcgggacaagcaccccgggggcggcggggccggc
gggggcggcggcgggggccccagcgcggccaactccttgctgtacactggggacctggag
gcgctgcagaggttgcaagcgggcaacgtggtgctgcctctggtgcaccgggtgacgggc
accctggccgccaccagcacggccgcgcagagggtctacaccacgggcaccatccgctac
gcgcccgccgaggtgaccctggccatgcagggcaacctgctgcccaacgcgcacgctgtt
aacttcgtggacgttaacagccccggctttggcctcgaccccaagacgcccatggagatg
ctctaccaccacgtgcacaggctcaacatgtccggaccgttcggcggcgccgtgagcgcg
gccagcctgacgcagatgcccgcgggcaacgtgttcaccacggccgagggactcttctcc
acgctgcccttcccggtctacagcaacggcatccacgccgcgcagactctggagcgcaag
gaggactga
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