Cavia porcellus (domestic guinea pig): 100713580
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Entry
100713580 CDS
T07777
Symbol
Chd8
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100713580 (Chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100713580 (Chd8)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100713580 (Chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100713580
NCBI-ProteinID:
XP_003474567
Ensembl:
ENSCPOG00000002538
LinkDB
All DBs
Position
Unknown
AA seq
2582 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGPVGS
SSASDLVPPSEETTTTELSKESTAPAPESLTLHDYTTQPASQEQQAQPVLQTSTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSNSAGGQTPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGTTGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPST
QPQPQQPPSTQPLTLSSVQQAQIMGPGQSPGQRLSVPLKMVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHTGGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKNSGERLKEEKPKKSKASGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREASHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHA
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
IVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKMEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REQTDFYRVVSTFGVEYDPDSMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDEPPDPNLFIEPITEERASWTLYRIELLRRLREQVLCHPLLEDRLALCQPPGPEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAPATSLSRC
STPLLHQQYTSRTASPLPLRPDAPVEKVPEEAAAQVPSLESLTLKLEHEMVARSQPTQDY
EMRIAPSDSAPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDDSEDE
KEEKLTADRSRPKLYDEESLLSLSVSQDGFPNEDGEQMTPELLMLQERQRASEWPKDRVL
INRIDLVCQAILSGKWPSSRRTQEMITGGILGPGNHLLDSPSLTPGEYGDSPVPTPRSSS
AASMAEEEASAVSTAAAQFTKLHRGADEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDGH
PLFHKKKGNRKKLVELEVECTEEPNHLDVDLESRIPVINKVDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEERRKQKWQRYKKNNKAELNCLGMEPVQTANSRNGKKGHHVET
VFNRVLPGPVTPDGSKKRARRTRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSSL
GHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLRATGFPSSP
ATTTSGTALRLPPLQPEDDDDDEDEDEEDDLSQGYDSSERDFSLIDDPMMPANSDSSEDA
DD
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatttgtttgatgacccaaatttatttggcctggactctctg
actgatgacagctttaaccaggtcacccaagatcccattgaggaagcccttggactgcca
agctctctggactccttggatcaaatgaaccaggatggtggtggtggtcctgtggggagt
tcttctgcaagtgacctggttcctccatcagaggaaacaactaccacagaactttccaaa
gaatccacagctccagctccagaatctttgaccttgcatgattataccactcagcctgcc
agccaggagcagcaagcccaacctgtcttacagacatcgacgccaacgtcgggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtgtcctccaatagtgctggagggcagacacctcagtcagcccctaagattgtt
atccttaaggcccccccaagctcctcagttactggtgcccatgtggcacaaattcaggct
caaggtatcaccagcacagctcaaccccttgtggctggtacagccaatggtggaaaagtc
acttttaccaaagtgctaaccggcacgccccttcgacctggtgtttccattgtctctggt
aacacagtgttggccgccaaggtccctgggaaccaggctgctgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctccagccagttaagggttcagctcctgctgga
aaccctgggaccacagggcccccactgaagcctgcagttacattgacctctacacctacc
cagggtgaatcaaaacgcatcacactggtcctccagcagccacagtctggaggtccccaa
ggacatcggcatgttgtgctagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgactcaagccaagaatgcccagggacagcctgccaaagtagtaactatc
cagctgcaggtgcagcagccgcagcaaaaaatccagattgtaccacagccgccatcaacg
cagccacagccccagcagccaccttcaacccagccactgactctctcctctgtgcagcag
gctcagataatgggaccgggacaaagtccaggacagagactctcagtaccacttaaaatg
gtgctgcagccacaggctggctcttcccaaggggcctcttctgggctctctgtagttaaa
gttctgagtgccagtgaagtggcagctctgtcatcaccagcaagctctgctcctcatact
gggggaaaaacaggaatggaggaaaaccgcaggctggagcaccagaagaagcaagaaaaa
gcaaatcggattgtagcagaggccatcgctagggcccgtgcccggggtgaacagaacata
cctcgggttctgaatgaggatgagttgcccagtgttcggccggaggaggaaggtgagaaa
aagcgcagaaaaaagaacagtggggagaggctgaaggaggaaaagccaaagaagagcaaa
gcatctggtacctccaaaactaaaggcaagagtaagctgaataccatcactcctgtagtg
ggtaagaagagaaaacgcaatacttcatctgataattcagatgtggaagtcatgcctgca
caatcacctcgggaagatgaagaaagcagcattcagaagagacgttcaaaccgccaagtt
aagcgaaaaaaatacaccgaggacctggatataaagatcactgatgatgaagaagaagaa
gaggtggatgtaactggtccaataaaacctgagcctatccttcctgaaccagtgcaagaa
ccagatggcgagaccttgccttctatgcagttctttgtggagaatcccagtgaagaagat
gcagctattgtagacaaagtactttctatgcgaattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtcaagtacaagaactactcttatctgcactgt
gaatgggctactatctctcagttagagaaggataagagaatccatcaaaaactaaaacgc
ttcaaaacgaaaatggcacagatgagacacttcttccatgaggatgaagaacctttcaat
ccagactatgtagaggtggataggatattggatgaatctcacagtattgataaggataat
ggtgagcctgtaatttactacctggtgaaatggtgttctttgccttatgaggatagtaca
tgggagctgaaggaggatgtcgatgagggcaagattcgagaattcaagcgaatccagtcc
aggcacccagaactcaaaagggtgaaccgtccacaggcaaatgcctggaaaaaactggag
ctgtcacatgaatataaaaacagaaaccagttacgagaatatcagttggagggagtcaat
tggctgctctttaattggtataacaggcagaactgcatcctggctgatgagatgggattg
ggcaaaactattcagtccattgccttcttgcaggaagtatataacgtgggcatccacggc
cccttcttggtcattgctcctctgtccaccattactaattgggaacgagagttcaacacc
tggactgagatgaatactattgtgtatcacggcagcctggccagccggcagatgattcag
cagtatgagatgtactgcaaagactcacgggggcgccttatcccaggcgcatacaagttt
gatgccctgatcaccacttttgagatgattttgtcggactgtcctgagcttcgtgaaatt
gaatggcgttgtgtcatcattgatgaagcccaccgactaaaaaaccgtaattgcaagctg
cttgatagtctcaagcacatggacctggaacacaaagtgctactcacaggaacgccactg
caaaatactgtggaggagctgttcagcttacttcatttcttggaaccttcacagtttccc
tcagaatcagagttccttaaggacttcggagatctcaagacggaggaacaggttcagaag
ctacaggccattctgaagccaatgatgctgagaagactcaaagaggatgttgaaaaaaac
ttggctcctaaacaggaaaccattatcgaagtagagctgactaacatccagaagaaatac
taccgtgctattttagagaagaacttctccttcctgtccaagggcgcaggtcataccaac
atgcccaatctgctcaacaccatgatggagttgcgcaagtgctgcaaccacccctatctc
atcaatggtgcagaagaaaagatactaacagaatttcgagaagcttcccatattatacct
catgacttccaccttcaggccatggttcgttcagcaggcaaattagttcttattgacaag
ttacttccaaaactcaaagctggtggccataaagttctgatattctcccagatggtacgc
tgcctagatattctagaggattacctaatccagaggaggtacttatatgaacgcattgat
gggagagttagaggcaatcttcgccaggcggccattgaccgcttcagcaagcctgattca
gatcgctttgtcttcttgttatgcactcgtgctggtgggcttggtattaatcttacagct
gctgatacctgtatcatctttgattcagattggaatccacaaaatgacctgcaggcccaa
gcacgatgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtcttatcactcgt
aattcctacgagagggagatgtttgataaagctagcctcaagttgggattggataaggct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccaacagttctctaag
aaggagattgaagatctcttaagaaaaggagcctatgcagccataatggaggaagatgat
gagggttcaaagttttgtgaagaggacatagaccagatcttgttaagacgaactacaacc
atcaccattgaatctgaaggaaaaggttctacctttgccaaggcaagctttgttgcttcc
gaaaataggacagatatttctctggatgatcccaacttttggcaaaagtgggccaaaaag
gctgatctagacatggacctgcttaatagcaagaataacttggtgattgacacacctaga
gtacggaaacagacgcgccacttcagcaccttgaaagatgatgacctggtagaattttct
gacttggagagtgaagatgatgagcggccacgctcgcgcagacatgaccggcatcatgcc
tacgggcgcactgactgctttcgggtggaaaagcacctcctggtgtatggttggggacgg
tggcgagatattttgtctcatggacgcttcaagcggcgtatgactgaacgagatgtggag
accatatgccgtgccatcctcgtgtactgtcttttgcactatcgtggggatgaaaatatt
aaaggcttcatctgggacttgattagccctgctgaaaatggcaaaacaaaagaattgcaa
aatcattcaggtctgtctatccctgtgccccgtggacgaaaggggaagaaagtcaaatcg
caaagtacttttgatatccataaagcagactggatccggaaatataaccctgacactctc
ttccaagatgagagttacaagaagcacttaaaacatcaatgtaacaaggtcctgttgcga
gtgcgaatgctatactacctgaggcaggaggtcattggcgaccaggcagaaaaggtgtta
gggggtgctattgccagtgagattgacatatggttcccagtagtggatcagctagaagtt
ccaacaacatggtgggacagtgaagctgataagtccctgctcattggagtctttaaacat
ggctatgagaaatataacacaatgagggcagacccagctttatgcttcctggaaaaggct
ggtcgaccagatgacaaagccattgcagccgaacaccgagtgttagataatttctctgat
atagtagaaggggttgactttgataaggattgtgaagatcctgaatataaaccactccag
ggtcccccaaaggaccaagatgatgagggtgatcctttaatgatgatggatgaggagatc
tctgtgattgatggagatgaagcccaggtcactcagcagccagggcatttattctggcct
ccaggctctgccctcactgctaggcttcggcgcctggttacagcctatcagcgcagctac
aagagagaacagatgaagatggaggctgcagagcgtggggaccggcggcggcggcgatgt
gaagccgcttttaagctgaaagaaattgctcggcgggagaaacaacaacgatggacaagg
cgtgagcaaactgacttctatagagtagtgtctacctttggtgtggagtacgaccctgac
agtatgcagttccattgggatcgcttccgcacttttgctcgattagacaaaaagactgac
gaaagccttaccaagtacttccatggctttgtggctatgtgccgtcaagtgtgtcgcctt
cccccagcagctggagatgaacctccagaccctaatctgtttattgagcccatcactgag
gaaagggcttcatggactctataccgtatcgaactgcttcggcgcttacgggaacaagtt
ttatgccacccccttttggaagaccggctggcattatgtcagcctccaggtccagaattg
cccaaatggtgggagcctgttcgtcatgatggggagcttctacgaggggcagcccgccat
ggggtgagccaaacagactgcaacatcatgcaggacccagacttctcttttctggctgcc
cgtatgaattatatgcagaaccatcaagccggagctccagctacgtccctgtctcgctgt
tctaccccgctgctgcaccagcagtatacttcgcgcactgcctcaccgctgcccctgcgc
cctgatgctcctgttgaaaaggtccccgaggaggcagctgcccaggtccccagtctggag
agtctgactttaaagctagagcatgagatggtggcccggagccagccaacccaagactat
gagatgcgaatagccccttctgatagtgctcctctggtgtcccggagcgttccaccagtc
aaactggaggatgaggatgattcggactccgagctggacttgagcaagctgtcgccatca
tcctcttcctcctcatcctcgtccagctccagctccagcactgatgacagtgaggatgag
aaggaagagaagctaactgctgaccgatcccgcccaaagctctatgatgaagagagtctc
ctgtccctctctgtgtctcaagatggtttcccaaatgaagatggagaacaaatgactcct
gagcttctgatgttgcaggaaagacaaagagcctctgagtggcccaaggatcgtgtcctg
ataaaccgtattgacctcgtctgccaggctatactctcagggaaatggccttctagccgc
aggacccaggaaatgataacaggaggaattttggggccaggcaaccacttactagacagt
ccttcattaaccccaggagagtacggtgactctccagtccctacaccacgaagtagcagt
gcagcttccatggcagaggaggaggcatctgcagtcagcacagcagcagcccagttcacc
aagcttcaccgaggcgcggacgagaaggagttcacagttcagatcaaagatgaggaagga
ttaaagttaacattccagaagcacaagctgatggctaatggagttatgggagatggacac
ccactctttcataagaagaagggaaacagaaaaaaactagtggagctggaggtggagtgc
acagaagagcctaatcaccttgatgtggacctggagtcccggatccccgtcatcaataag
gtggatggtactttgctggtgggtgaggatgcccctcgccgggctgaactggagatgtgg
ttacagggtcatccagagtttgctgtcgatccccgatttctagcgtatatggaggaacgc
agaaaacagaagtggcaaagatataaaaaaaataataaagcagaattgaactgtttggga
atggaaccagtacagacagctaactctagaaatgggaagaagggtcaccacgttgaaact
gtgttcaaccgagttttgccagggcctgttacacccgatggcagcaagaagcgggcccgt
aggacacgaccagacctttctaagatgatggccctgatgcagggcggaggcactggctcc
ttatctctgcataacaccttccagcacagcagtagtggtctgcagtctgtgtcatctctg
ggtcacagtagtgccacttctgcatctttgccttttatgccgtttgtgatgggtggtgca
gcatcatcccctcatgtagactccagcaccatgcttcatcaccaccaccaccacccccac
ccccaccatcaccaccatcaccatccaggcttgcgagccactggcttcccctcttcacca
gcgactaccacctctggtactgccttgaggttgccaccactgcaacctgaggatgacgac
gatgatgaggatgaagatgaggaggatgatttatctcagggctatgatagctcagaaagg
gacttttcacttattgatgatcctatgatgccagccaactcagactccagtgaagatgct
gatgactga
DBGET
integrated database retrieval system
