Cavia porcellus (domestic guinea pig): 100713655
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Entry
100713655 CDS
T07777
Symbol
Rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100713655 (Rc3h2)
04121 Ubiquitin system [BR:
cpoc04121
]
100713655 (Rc3h2)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100713655 (Rc3h2)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100713655 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-RING_10
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100713655
NCBI-ProteinID:
XP_003470846
Ensembl:
ENSCPOG00000008511
UniProt:
H0VCJ1
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSSLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNSENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNASGPSAE
SVTENKIGSPPKTPVSNIAATSAGPSNVGTELNSVPPKSSPFLTRVPVYPQHSENIQYFQ
DPRTQLPFEIPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPVSSTLPVATQSPTPPSPLFSVDFRSDFSESMSGTKFEEDHLSHYSPWSC
GTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSEATSS
AHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQSEQIEEILDIQ
LGISAQNEQLLNGSAVENGHPAQQHQKEPLKQQRQSLGEDHVILEEQKPILPVTSCFSQS
LPVSVSNSSCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcctaaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgacgtgcttcctgtcaactttgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtagtctaggtgaaaataaacactatgaagttgcaaagaaa
tgtgttgaggatttggccctctacttaaaaccgctaagtggaggtaaaggcgtggctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaattggtgacacttgtaaactgt
cagctggtggaggaagaaggtcgagtcagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactgatactacagcaccagaatcctcagcagttatctgccaatctg
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctcgtgttgctggcattagaagatggttctgctctctcacggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcgtgttttaaggttaccaaaagggacgaagac
tcttccctgatgcagctaaaggaggaatttcggagttacgaggcactacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcttcactcttatatggtgacttggctcataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagctgcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagagaatgcaatggtggct
gttaaaacagtggtgcatggcctcgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaatagcaaatacaaaactagcatgtgccgagatttgcga
cagcaaggagggtgtccacgaggaacaaattgtacctttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaattcagaa
aacagtgtttcccagctaattccacgtagtactgacagtacattaagagctctggagact
gtgaagaaagtggggaaagttggcactaatggtcaaaatgcttctgggccctctgcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaacatagctgct
acctcagctgggccctctaatgttggaacagaactgaattctgtgcctccaaaatccagc
ccatttctaactagagtaccagtatatcctcagcattcagaaaacattcagtattttcaa
gatccaaggactcaattgccctttgaaattccacagtatccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctctctcccacctgcttccatgccatatgctgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagcagtat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacccatgtatcaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcattcatctgtctatcagacgtctttgcgggaaagatataactcattagat
ggatattattcagtggcttgtcagccaccaagtgaaccaaggacgactgtgcctttacca
agggaaccttgtggtcatttgaagaccagctgcgaggaacagataagaaggaagccagac
cagtgggcacagtaccacactcagaaagcacctgtctcttcaactctccctgtggcaaca
cagtctccaacaccaccttctcctctatttagtgtagacttccgttcagatttctctgag
agtatgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtcttgt
ggcaccataggctcctgtataaatgccatcgattcagagcccaaagatgtaatcgctaat
tcaaatgctgtgttaatggatctggacagtggagatgttaagagaagagtgcatttattt
gaaactcaaaggaggacaaaagaagaagacccaataattccctttagcgatggacccatc
atctcaaaatggggtgcaatttcccgatcttctcgtacaggttaccatactacggatcct
gtccaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagattatgtc
ccatatgttaatgctgttgattcaaggtggagttcgtatggcagtgaggccacatcatca
gcacactatattgaacgtgacagattcattgttactgatctgtctggtcatagaaagcat
tccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattactt
ctacagagggaggcaaatgctctagccatgcaacagaagtggaattccctggatgaaggc
cgtcaccttaccttaaatcttctaagtaaggaaattgaactgagaaatggagagagtgat
tacacagaagatgcagcagatactaagcctgatagagatattgagttagagctttcagca
cttgatactgatgaacctgatggacaaagtgaacaaattgaagagatcttggacatacaa
cttggtattagcgctcaaaacgagcagttactaaatggatctgcagtggaaaatgggcat
ccagctcaacagcatcagaaagagccattaaaacaacagagacagagtttaggtgaagac
catgtgattctggaggagcaaaaaccaattctaccggtaacttcttgctttagtcagtca
ctccctgtgtctgtgagcaattcaagttgcctccccatcaccacgtctgtcagtgttggc
aacctcattctgaaaactcatgttatgtctgaagataaaaatgactttttaaaacctgtt
gcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
