Cavia porcellus (domestic guinea pig): 100713914
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Entry
100713914 CDS
T07777
Symbol
Supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100713914 (Supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100713914 (Supt5h)
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100713914 (Supt5h)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100713914 (Supt5h)
RNA polymerase I system
100713914 (Supt5h)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100713914 (Supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
100713914
NCBI-ProteinID:
XP_003467309
Ensembl:
ENSCPOG00000011367
UniProt:
A0A286XAJ5
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKVLSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPRTVGVIVRLERETFQVLNMYGKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSDREGEIRHIYRNFAFLHCKKLVENGGMFVCKTRHLVLAGGLKPRDVTNFTVG
GFAPMSPRISSPMHPSGGGQHGGFGSPGGSGGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSNYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGIIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaagacagcaacttctcggaggaggaggacagtgaacgcagcagtgac
ggcgaggaggccgaggtagaggaagagcgtcggagtgcggcaggcagtgagaaggaagag
gaacctgaggaagaagaggaggaggaagaggaagaagaatatgatgaagaagaggaagag
gaagatgacgatcggccccccaaaaaacctcgacatggcggcttcattctggacgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaggacggagccgaggacatccta
gagaaagaagagattgaagcctccaatattgataatgtcgttctggacgaagaccggtct
ggggcccgccgcctgcagaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatacgccaaatcatctgtgggagagacggtttacggggggtctgatgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggatcccaacctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttccttgatgcgaaagttc
atcgcctaccagttcacagacacgcccctacagatcaagtctgtggtggcccccgagcac
gtgaaggggtacatctacgtggaggcctacaagcagacccacgtgaagcaggccatcgaa
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaggtggtgaaggaggtggccaacctgaagcccaagtcctgggtccgc
ctcaagcgaggcatctacaaggacgacatagctcaggtggactacgtggagcccagccag
aacaccatctccctgaagatgatcccgcgcatcgattacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagttcaagcggccaccacagagactcttc
gatgctgagaagatcaggtccctagggggtgacgttgcttctgatggtgatttccttatc
tttgaggggaaccgctacagccggaagggcttcttgttcaagagcttcgccatgtctgct
gtgatcacagagggtgtgaagcccacactctctgagctagaaaaatttgaggaccagcca
gagggcatcgacctggaggtggtgacagaaagcacagggaaggaacgggagcacaatttc
cagcctggggacaatgtggaggtatgcgagggcgagctcatcaacctgcagggcaaggtt
ctcagtgtggacggtaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccagcccaggaacttcgcaagtacttcaagatgggggaccacgtgaaggtg
atcgctggccgatttgaaggtgacacaggcctcattgttcgagtggaggagaactttgtc
atcctcttctccgacctcaccatgcatgagctgaaggtgctcccccgagacctgcagctc
tgctcagagacagcatcaggtgtggatgttgggggccaacatgaatggggtgagctggta
cagctggacccccggactgtgggtgtcatcgtgcgactagagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgactgtcaggcaccaggctgtgacccagaagaaggac
aaccgctttgctgtagccttggactctgagcaaaacaacatccatgtcaaagacatcgtc
aaggtcatcgacggcccccactcggaccgggagggtgagatccgccatatctaccgaaac
ttcgccttcctgcactgcaagaagctggtggagaatggaggcatgtttgtctgcaagacc
cgccacctggtgctggccgggggcttgaagccccgagatgtgaccaatttcactgtgggt
ggctttgcacctatgagtccacggatcagcagccccatgcaccccagtggtggaggtcag
catggtggctttggtagcccaggtggcagtggtggtggcatgagcaggggccgaggacgg
agagacaacgagctcattggccagactgtgcgcatctctcagggcccctacaaaggctac
attggcgtggtgaaagatgccacagagtccacggcccgtgtggagctgcactccacctgc
cagaccatctctgtggaccgccagcggctcaccacggtcggctcacggcgaccaggtggc
atgacctcaaactatggtcggacgcccatgtatggttcccagacacccatgtatggctct
ggttcccgtacccccatgtatggctcccagacgcccctccaggatggcagtcgcaccccg
cattacggctcgcagacacccttgcatgatggcagccgcacccctgcccagagtggggca
tgggaccccaacaaccccaacacaccatcacgggctgaggaagagtatgaatacgccttc
gatgatgagcccaccccatccccccaggcctatgggggaacccccaacccccaaacacct
ggctacccagacccctcgtctccccaggtcaacccacagtataacccgcagacaccaggg
acacccgccatgtacaacacagaccagttttcgccctacgcggccccctcgcctcaaggc
tcctaccagcccagtcccagtccccagagctaccaccaggtggcgcccagcccggcaggc
taccaaaacacccactctccggccagctaccatcctacaccctcgcccatggcctaccag
gcaagtcccagcccgagcccagtaggctacagtccaatgacacctggagccccttcccct
ggtggctacaacccacacacaccaggctcaggcattgagcagaactccagcgactgggta
accactgacatccaggtgaaggtgcgggatacctacctggatacacaggtggtagggcag
accggcatcatccgcagtgtcacgggaggcatgtgctctgtgtacctgaaggacagtgaa
aaggtggtcagcatttccagtgagcacttggagcccattacacccactaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacaggagtcctgctgagcatcgacggc
gaggacggaattgtccgaatggaccttgatgaacagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
