Cavia porcellus (domestic guinea pig): 100714035
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Entry
100714035 CDS
T07777
Symbol
Prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100714035 (Prpf39)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100714035 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
ANAPC5
Motif
Other DBs
NCBI-GeneID:
100714035
NCBI-ProteinID:
XP_003471816
Ensembl:
ENSCPOG00000001443
UniProt:
A0A286XVJ1
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MQNSHMDEYRNSNNGSTGNSSEAIVEHSADFSTEIMNVTEMEQSPDGSPNVNASAEETEM
TNTVDLPVTAIEAEANFPPEYDKFWKTVENNPQDFTGWVYLLQYVEQENHLLAARKAFDK
FFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDAA
DPETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAVYDRILGIPTQLY
SHHFQRFKEHIQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQD
AIKNARSNNESSFYAIKLARHLFKIQKNLLKSRKVLMEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QESLKRKAENGSEEPEEKKVHTDDTTSASTQMIDGDLQANQAAYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaactctcacatggatgagtacagaaattctaataatggcagcacaggcaacagt
tcagaggccatagtagaacattctgctgatttcagtactgagattatgaatgtcacagaa
atggaacagtcacctgatggctctcccaatgtgaatgcatctgcagaagaaactgaaatg
acaaatactgtggaccttccagtgacagcgatagaagctgaagcaaattttcctccagaa
tatgataaattttggaaaactgttgaaaataatcctcaggattttacaggctgggtatat
ttgcttcaatatgtagaacaggagaatcacttgttggctgccaggaaagcatttgacaaa
tttttcatacactatccgtattgctatggttattggaaaaagtatgcagatcttgaaaag
cgacatgacaacattaaacaatcagatgaggtgtatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagaaaccttggatgctgca
gatcctgagacaaacagtactataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgatctgacagactctgggaaatgtatatcaactgggaaaatgaacaggga
aacctgagagaagttactgctgtatatgatcgtattcttggtattccaacacagctgtat
agtcatcattttcagagatttaaagaacatatacagaataacttgccaagagatctctta
actggtgaacagtttatccagctgcgaagggaattagcttctgtaaatggacatagtggt
gacgatggtcctcctggtgatgatttaccctcaggaattgaagacataactgatccagca
aagttaataaccgaaatagagaacatgagacacaggatcattgaaattcatcaggaaatg
tttaactataatgagcatgaagtgagtaaaaggtggacatttgaagaaggtattaaaaga
ccttattttcatgtgaaaccattggaaaaggcccaactaaaaaactggaaagaatactta
gagtttgaaattgaaaatggaactcatgagcgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtacgccaagtacatggaaaaccac
agcatcgaaggagtgaggcacgtcttcagcagagcttgtactattcatctcccaaagaaa
cccatggtgcatatgctttgggcagcctttgaggaacagcagggtaatattaacgaagcc
aggaatatcttgagaacatttgaagaatgtgttctgggtttggcaatggttcgattgcga
agagtgagtttagagcgacggcatggaaatatggaagaagctgagcatttgcttcaggac
gctattaagaatgccagatcaaataatgaatcatccttttatgctatcaaactagcccga
catcttttcaaaatacaaaaaaaccttctcaaatcaagaaaggtgcttatggaagcaatt
gaaagagataaagagaacacaaagctatacctcaatttacttgaaatggaatatagtggt
gacctcaaacaaaatgaagaaaatatattaaattgttttgacaaagctatacatggttca
ttacctattaaaatgagaattacgttttctcagagaaaagtggaatttcttgaagatttt
ggatcagatgttaataagcttttgaatgcttatgatgaacatcaaacactcctaaaagaa
caagagagtttaaaaagaaaagcagaaaatggatcagaagaaccagaagaaaagaaagta
cacacagacgatacaacttcagcatctacacaaatgattgatggcgacttacaagcaaat
caagctgcatataattatagtgcctggtatcaatacaattatcagaatccttggaattat
ggacagtattatcctccccctccaacttga
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