KEGG   Cavia porcellus (domestic guinea pig): 100714039
Entry
100714039         CDS       T07777                                 
Symbol
Nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100714039 (Nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoc03021]
    100714039 (Nelfb)
Transcription machinery [BR:cpoc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     100714039 (Nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 100714039
NCBI-ProteinID: XP_003473003
Ensembl: ENSCPOG00000015444
LinkDB
Position
Unknown
AA seq 648 aa
FRAGRKWAVRARSEPRCGRDLVELEAAGDRSSGGPRGLGERASGVSAAAPGERSGDGAPS
QAAAGASAMFAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLD
LHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPV
VMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEK
ENALFSTELSVLHNFFSPSPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNV
HYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKK
GQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQEMLPRDSPDLLLLLRLLALGQGAW
DLIDSQVFKEPKMEVELITKFLPMLMSFVVDDYTFSVDQKLPAEEKAPITYPNTLPESFT
KFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTGSLALL
ADEFALEDFCSSLFEGFFLTASPRKENVHRHVLRLLLHLHARVAPSKLEALQKALEPTGQ
SGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPTLELPLPSMPAPAGL
NT seq 1947 nt   +upstreamnt  +downstreamnt
ttccgtgcggggcggaagtgggcggtgcgggcccgttcggagccgcgctgcgggcgcgac
ctggtcgagctggaggccgcgggggatcggagttcgggcggtccccgaggtctaggggag
cgggcttcaggggtgtccgcggcggcgccgggggaacggagtggcgatggtgctccgagc
caggcggcggctggggcctcggccatgtttgcggggctgcaggacctgggtgtggccaac
ggcgaggacctgaaggagaccctgaccaattgcaccgagccgctcaaagccatcgagcaa
ttccagacggagaatggtgtgctgctgccttccctgcagtcggccctgcccttcttggac
ctgcatgggaccccacggctggagttccaccagtcggtgttcgatgagctgcgggacaag
ctgctggaacgagtgtcagccatcgcttcagaggggaaggctgaggagaggtacaagaag
ctggaagacttgctggagaagagtttttccctggtcaagatgccctccctgcagccagtg
gtgatgtgtgtcatgaaacacctgccaaaggttcctgagaagaagctgaagttggtgatg
gctgacaaggagctgtaccgcgcctgtgcggtggaggtgaagcggcagatctggcaggac
aaccaggcactctttggagatgaggtttccccactactgaagcagtacatactggagaag
gagaatgcactcttcagcactgaactctctgtcctgcacaacttcttcagtccttccccc
aagaccaggcgccagggtgaggtggtgcagaagctgacacagatggtcgggaagaatgtg
aagctgtatgacatggtgctgcagttcctgcgcacgcttttcctgcgcaccaggaatgtg
cactactgtacattgcgggctgagctgctcatgtccctgcacgaccttgacgtgggcgac
atctgcactgtggacccctgccacaagttcacgtggtgcctggatgcctgcattcgagag
cggtttgtggacagcaagagagcccgggagctgcagggatttcttgatggtgtgaagaaa
gggcaggagcaggtcctgggagacctgtctatgatcctttgtgaccccttcgccattaac
acgctgtcactgagcactatcaggcacctgcaggagctggtcagccaggagatgctgccc
agagacagccccgacctcctgctgctgctcaggctgctggcgctgggccagggtgcatgg
gacctgatagacagccaggtcttcaaggagccaaagatggaggtggagctcatcaccaag
ttcctgccgatgctcatgtccttcgtggtggatgactacacgttcagtgtggaccagaag
cttccggcagaggagaaagcgccaatcacgtaccccaacacgcttcctgaaagctttacc
aagttcctgcaggagcagcgcatggcctgtgaggtagggctgtattacgtcctgcacatc
accaagcagagaaacaagaatgcattgctgcgtctgctgcccgggctggtggagaccttc
ggtgacctggccttcagtgatatctttctccacctgctcaccgggagcctggctctgctg
gctgacgagtttgccctggaagatttctgcagcagcctctttgaaggcttcttccttact
gcctcacccaggaaggagaacgtgcaccggcatgtgctgcgacttctgctccacctgcat
gccagggtggccccatccaagctggaggccctgcagaaggccctggagcccacaggccag
agtggagaggctgtgaaggagctctactcccagcttggagagaagctggaacagctggac
catcggaagcccagccctgcacaggctgctgagacacccacgctggagctgcccctgccc
agcatgcctgccccagctgggttgtag

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