Cavia porcellus (domestic guinea pig): 100714039
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Entry
100714039 CDS
T07777
Symbol
Nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100714039 (Nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100714039 (Nelfb)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
100714039 (Nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
100714039
NCBI-ProteinID:
XP_003473003
Ensembl:
ENSCPOG00000015444
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
FRAGRKWAVRARSEPRCGRDLVELEAAGDRSSGGPRGLGERASGVSAAAPGERSGDGAPS
QAAAGASAMFAGLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLD
LHGTPRLEFHQSVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPV
VMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEK
ENALFSTELSVLHNFFSPSPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNV
HYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKK
GQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQEMLPRDSPDLLLLLRLLALGQGAW
DLIDSQVFKEPKMEVELITKFLPMLMSFVVDDYTFSVDQKLPAEEKAPITYPNTLPESFT
KFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTGSLALL
ADEFALEDFCSSLFEGFFLTASPRKENVHRHVLRLLLHLHARVAPSKLEALQKALEPTGQ
SGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPTLELPLPSMPAPAGL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttccgtgcggggcggaagtgggcggtgcgggcccgttcggagccgcgctgcgggcgcgac
ctggtcgagctggaggccgcgggggatcggagttcgggcggtccccgaggtctaggggag
cgggcttcaggggtgtccgcggcggcgccgggggaacggagtggcgatggtgctccgagc
caggcggcggctggggcctcggccatgtttgcggggctgcaggacctgggtgtggccaac
ggcgaggacctgaaggagaccctgaccaattgcaccgagccgctcaaagccatcgagcaa
ttccagacggagaatggtgtgctgctgccttccctgcagtcggccctgcccttcttggac
ctgcatgggaccccacggctggagttccaccagtcggtgttcgatgagctgcgggacaag
ctgctggaacgagtgtcagccatcgcttcagaggggaaggctgaggagaggtacaagaag
ctggaagacttgctggagaagagtttttccctggtcaagatgccctccctgcagccagtg
gtgatgtgtgtcatgaaacacctgccaaaggttcctgagaagaagctgaagttggtgatg
gctgacaaggagctgtaccgcgcctgtgcggtggaggtgaagcggcagatctggcaggac
aaccaggcactctttggagatgaggtttccccactactgaagcagtacatactggagaag
gagaatgcactcttcagcactgaactctctgtcctgcacaacttcttcagtccttccccc
aagaccaggcgccagggtgaggtggtgcagaagctgacacagatggtcgggaagaatgtg
aagctgtatgacatggtgctgcagttcctgcgcacgcttttcctgcgcaccaggaatgtg
cactactgtacattgcgggctgagctgctcatgtccctgcacgaccttgacgtgggcgac
atctgcactgtggacccctgccacaagttcacgtggtgcctggatgcctgcattcgagag
cggtttgtggacagcaagagagcccgggagctgcagggatttcttgatggtgtgaagaaa
gggcaggagcaggtcctgggagacctgtctatgatcctttgtgaccccttcgccattaac
acgctgtcactgagcactatcaggcacctgcaggagctggtcagccaggagatgctgccc
agagacagccccgacctcctgctgctgctcaggctgctggcgctgggccagggtgcatgg
gacctgatagacagccaggtcttcaaggagccaaagatggaggtggagctcatcaccaag
ttcctgccgatgctcatgtccttcgtggtggatgactacacgttcagtgtggaccagaag
cttccggcagaggagaaagcgccaatcacgtaccccaacacgcttcctgaaagctttacc
aagttcctgcaggagcagcgcatggcctgtgaggtagggctgtattacgtcctgcacatc
accaagcagagaaacaagaatgcattgctgcgtctgctgcccgggctggtggagaccttc
ggtgacctggccttcagtgatatctttctccacctgctcaccgggagcctggctctgctg
gctgacgagtttgccctggaagatttctgcagcagcctctttgaaggcttcttccttact
gcctcacccaggaaggagaacgtgcaccggcatgtgctgcgacttctgctccacctgcat
gccagggtggccccatccaagctggaggccctgcagaaggccctggagcccacaggccag
agtggagaggctgtgaaggagctctactcccagcttggagagaagctggaacagctggac
catcggaagcccagccctgcacaggctgctgagacacccacgctggagctgcccctgccc
agcatgcctgccccagctgggttgtag
DBGET
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