Cavia porcellus (domestic guinea pig): 100714318
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Entry
100714318 CDS
T07777
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100714318 (Taf1a)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100714318 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
FIMAH
Motif
Other DBs
NCBI-GeneID:
100714318
NCBI-ProteinID:
XP_003474269
Ensembl:
ENSCPOG00000007867
UniProt:
H0VB19
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSDFSEELARPGSEDGQVETSVVSGTGMHFPWLWKHLDTVATRGKKKKDFAQTTGACLSL
IQEALLKQRWQQAAEYMHSYLQTLEDSDSNKKQMAPEIIWKLGSEILFYHPKSSVKTFSA
FADQMKNVGVLNYLKISLQHALYLIHHGMLEDAHRNLSQAETWRYGEKSSSQETLINLVQ
AYKGLLEYYSWSKKKMELSQCDKDDYAYSTEARNTFRHSWKTSVNFSSLIKTPGVWDPFV
KSYVEMLEFHGDRDGARKVLTNYAYDKKFPSNPNAHIYLYSFLKRVRAPRAELLRALQIL
YQIVPSHKLMLEFHTLLRRSDREEHRKLGLGVLFGLLDFAGCTKNITAWKYLASYLRQIL
MQNHLGWVQEEWKSRRNWWPTFHFSYFWAKSDWKEDKDLAYEKAFVAGMLLGKGCRYFRY
ILKQDHQDLWKKIKRMKKSVKKYSIVKPAA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcagtgaagagttagcaaggcctgggtcagaagatggccaagtggaaaca
tctgtggtctctggtacaggaatgcactttccgtggctttggaagcatctagataccgtc
gcaaccagagggaagaagaaaaaagacttcgctcagaccacgggtgcctgcttaagcctc
atccaggaggcgctgctgaagcagcggtggcagcaggccgccgagtacatgcacagctac
ctgcagaccctggaggactcggacagcaacaagaagcagatggcgcccgagattatatgg
aagcttggaagcgaaattctcttttaccaccctaaaagcagcgtgaagactttcagtgcc
tttgcggaccagatgaaaaacgttggcgtcctgaattatttgaagatctccctgcagcac
gcgctctacctgattcaccacgggatgctggaggacgcccacaggaacctcagtcaggcg
gagacgtggcggtacggggagaagtcgtcctcccaggaaaccctcatcaacctcgtgcag
gcctataaagggcttttggaatactacagttggtctaaaaagaagatggagttgtcacag
tgtgataaggatgattatgcttatagcacagaagcccgaaatacattccgccacagctgg
aagacatctgtaaattttagttcactgattaaaactcctggcgtttgggacccttttgtg
aagagttacgtagagatgctggaattccatggtgaccgagacggggcccgcaaggtcctc
accaattacgcgtatgacaaaaagttcccgtcaaacccaaatgcccacatctacctctac
agcttcctcaagagagtgcgggcaccgagggccgagctgctcagagccctgcagattttg
tatcagattgtaccgtctcataaactgatgctagaattccacacgttactgagaagatca
gacagagaggagcaccgtaagctcgggctaggagtgctatttggacttctggattttgct
ggatgcactaagaatataactgcttggaagtacctggcaagctacctgagacagatttta
atgcagaatcatcttggatgggtccaggaagagtggaagtcgaggagaaactggtggcca
accttccacttcagctacttttgggcaaaaagtgattggaaggaagataaagacttggct
tacgagaaagcatttgtagctggaatgctgttaggaaaaggttgtaggtattttcgatac
attttaaagcaagatcatcaagacctatggaagaaaatcaagcggatgaagaaatcagtg
aaaaaatacagcattgtgaaaccagccgcatga
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