Cavia porcellus (domestic guinea pig): 100714590
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Entry
100714590 CDS
T07777
Symbol
Ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X3
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100714590 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100714590 (Ddx46)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100714590 (Ddx46)
Spliceosome [BR:
cpoc03041
]
Complex A
U2 snRNP components
U2 related factors
100714590 (Ddx46)
Complex B
100714590 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100714590
NCBI-ProteinID:
XP_003473305
Ensembl:
ENSCPOG00000011362
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTEGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTVVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcgcgccactatcggaaacgatctgcgtcaagaggacgctctggaagt
cgatctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagacagaagaagagaaagatctcggagcagggataaaaggagatct
cgatcaagagacagaaagcgtctgaggcgttccagaagtagagagagagacagaagccga
gagcgaagaagatctcgcagccgagacaggagacgctcaaggagcagaagccgaggccga
aggtcccgatcctccagtcctggcaataaaagcaagaaagctgagaatagatccaggtcc
aaggagaaaacggagggcggggaaagttctaaagagaagaaaaaagacaaagatgataag
gaggatgaaaaagaaaaagatgctggtaactttgaccagaataagctggaggaagaaatg
agaaagcgaaaagaaagagttgaaaaatggagagaagaacaacgtaaaaaggcaatggag
aacataggagaactaaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagacgatgatgatgatgaagacgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaagaattagatccactagatgcttacatggaagaagtgaaagaggaagtaaag
aagtttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctgggccaaca
gtcaccaaagttgtcacagttgtgactaccaaaaaagcagttgtggattctgacaagaag
aaaggtgaactgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagcccttacaggctatcagacaaaacagagaaaacttctagaaccg
gttgaccatggaaaaattgaatatgaaccattcagaaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaggaggtaaatgtatttcggttggagatggaaggtatt
acagtcaaaggaaagggttgtcccaaaccaattaaatcttgggttcagtgtggaatttcc
atgaagatcttaaattccctcaaaaagcatggctatgagaagcccacaccaatccaaacc
caagcaattcccgctataatgtctggacgagatttaattggtattgccaagacaggaagc
gggaaaaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcacta
gaagaaggagagggtccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttaggacttagagtggtctgtgtttac
ggaggaacgggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgtggttttagatgaagcagatagaatgtttgatatgggatttgag
ccacaggtcatgcgcattgtggataatgtccgtcctgaccgacagacggttatgttttca
gctactttccctagagctatggaggcattggcccgcagaatcctgagtaaacctattgaa
gtacaggttggaggcaggagtgtggtttgttcagatgtggagcaacaggtgattgtgatt
gaagaagaaaagaaattcttaaaattacttgagctgctaggtcattatcaagaatcagga
tctgtcattatatttgtggataagcaagaacacgctgatggtctgctgaaggatttaatg
agagcatcttacccttgcatgtctcttcatggaggtattgatcagtatgacagagatagc
atcataaacgactttaagaatgggacctgcaagcttcttgtggccacctcagttgctgcc
cgaggtctagatgtgaaacatctaattcttgtagtaaattacagctgccccaaccactat
gaggattatgtacacagagcaggacggactggaagagccggcaacaaaggttatgcctac
acttttatcacagaggatcaagctcgctatgctggtgacatcattaaagctcttgaattg
tcagggactgtggtacctcctgatctagagaaactttggagtgatttcaaagatcaacag
aaagctgaaggaaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaacgagaggaagaagttacagaaggcagcccttggt
ctgcaagattcagatgacgaggatgctgcagttgatattgatgaacaaattgaaagcatg
tttaattcaaagaagagagtaaaagacatggctgctcctggaacatctagtgttcctgcc
ccaactgcaggaaatgctgaaaaattagaaattgcaaagcgattggctctcaggattaat
gctcagaagaatttgggcattgagtctcaggatgtgatgcagcaggccaccaacgcaatt
ctcagaggtggcaccatcctggctcccactgtatctgcaaaaaccattgcagagcagctt
gctgaaaagatcaatgccaagctcaattatgtgcctttagaaaaacaagaagaagagagg
caggatggtggacagaatgaatcttttaagagatatgaggaagaattagagattaatgac
ttcccacagactgctaggtggaaagttacctctaaggaagctcttcagagaatcagtgaa
tattccgaagctgctattacaatcagaggaacgtacttccctcctggcaaagaacccaag
gaaggagagcgaaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcactaggctcataaaagaagaattgatccgactgcaaaattcatac
cagccgacgaataaaggaagatacaaagtcttataa
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integrated database retrieval system
